RNA–Protein interactions for RNA: ENST00000341376.10

NFYA-201, Transcript of nuclear transcription factor Y subunit alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NFYA, Length 3,811 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NFYA-201ENST00000341376 NISCHQ9Y2I1 1504 aa18.53■□□□□ 0.56
NFYA-201ENST00000341376 SHROOM4Q9ULL8 1493 aa17.28■□□□□ 0.36
NFYA-201ENST00000341376 SUPT5HO00267 1087 aaKnown RBP17.21■□□□□ 0.35
NFYA-201ENST00000341376 DCAF8L2P0C7V8 631 aa16.93■□□□□ 0.3
NFYA-201ENST00000341376 PCGF6Q9BYE7 350 aa16.64■□□□□ 0.25
NFYA-201ENST00000341376 PPARGC1BQ86YN6 1023 aaKnown RBP16.48■□□□□ 0.23
NFYA-201ENST00000341376 HRCP23327 699 aa16.37■□□□□ 0.21
NFYA-201ENST00000341376 EHMT2Q96KQ7 1210 aa16.36■□□□□ 0.21
NFYA-201ENST00000341376 CHIC1Q5VXU3 224 aa16.3■□□□□ 0.2
NFYA-201ENST00000341376 LOC105371045A0A1W2PR82 267 aa16.27■□□□□ 0.19
NFYA-201ENST00000341376 MYO15BQ96JP2 1530 aa16.09■□□□□ 0.17
NFYA-201ENST00000341376 FAM9AQ8IZU1 332 aaPredicted RBP16.09■□□□□ 0.17
NFYA-201ENST00000341376 TTBK1Q5TCY1 1321 aaPredicted RBP15.83■□□□□ 0.12
NFYA-201ENST00000341376 TRIM26Q12899 539 aaPredicted RBP15.78■□□□□ 0.12
NFYA-201ENST00000341376 TRIM41Q8WV44 630 aa15.71■□□□□ 0.1
NFYA-201ENST00000341376 PELP1Q8IZL8 1130 aaKnown RBP15.67■□□□□ 0.1
NFYA-201ENST00000341376 ZCCHC6Q5VYS8 1495 aaKnown RBP15.6■□□□□ 0.09
NFYA-201ENST00000341376 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.51■□□□□ 0.07
NFYA-201ENST00000341376 CCER1Q8TC90 406 aaPredicted RBP15.49■□□□□ 0.07
NFYA-201ENST00000341376 SCAF1Q9H7N4 1312 aaKnown RBP15.46■□□□□ 0.06
NFYA-201ENST00000341376 ZEB1P37275 1124 aaPredicted RBP15.46■□□□□ 0.06
NFYA-201ENST00000341376 DCAF1Q9Y4B6 1507 aa15.4■□□□□ 0.06
NFYA-201ENST00000341376 YTHDC1Q96MU7 727 aaKnown RBP15.37■□□□□ 0.05
NFYA-201ENST00000341376 RANGAP1P46060 587 aaPredicted RBP15.26■□□□□ 0.03
NFYA-201ENST00000341376 NEUROD1Q13562 356 aa15.23■□□□□ 0.03
NFYA-201ENST00000341376 GTF3C3Q9Y5Q9 886 aa15.22■□□□□ 0.03
NFYA-201ENST00000341376 DIEXFQ68CQ4 756 aaKnown RBP15.19■□□□□ 0.02
NFYA-201ENST00000341376 CENPBP07199 599 aaPredicted RBP15.14■□□□□ 0.01
NFYA-201ENST00000341376 ACIN1Q9UKV3 1341 aaKnown RBP15.13■□□□□ 0.01
NFYA-201ENST00000341376 UBTFP17480 764 aaKnown RBP15.12■□□□□ 0.01
NFYA-201ENST00000341376 MYT1Q01538 1121 aa15.1■□□□□ 0.01
NFYA-201ENST00000341376 HNRNPUL2Q1KMD3 747 aaKnown RBP15.07■□□□□ 0
NFYA-201ENST00000341376 RSF1Q96T23 1441 aaPredicted RBP15.03■□□□□ -0
NFYA-201ENST00000341376 CCDC180Q9P1Z9 1646 aa15.03■□□□□ -0
NFYA-201ENST00000341376 SCRIBQ14160 1630 aa14.99□□□□□ -0.01
NFYA-201ENST00000341376 RB1CC1Q8TDY2 1594 aa14.86□□□□□ -0.03
NFYA-201ENST00000341376 ABCC9O60706 1549 aa14.86□□□□□ -0.03
NFYA-201ENST00000341376 APLP2Q06481 763 aa14.84□□□□□ -0.03
NFYA-201ENST00000341376 ZNF316A6NFI3 1004 aaPredicted RBP14.83□□□□□ -0.04
NFYA-201ENST00000341376 MIER1Q8N108 512 aa14.82□□□□□ -0.04
NFYA-201ENST00000341376 CECR2Q9BXF3 1484 aa14.82□□□□□ -0.04
NFYA-201ENST00000341376 ITGAEP38570 1179 aa14.76□□□□□ -0.05
NFYA-201ENST00000341376 PABPN1Q86U42 306 aaKnown RBP eCLIP14.7□□□□□ -0.06
NFYA-201ENST00000341376 CSRNP3Q8WYN3 585 aa14.69□□□□□ -0.06
NFYA-201ENST00000341376 BCANQ96GW7 911 aa14.64□□□□□ -0.07
NFYA-201ENST00000341376 MROH2BQ7Z745 1585 aa14.62□□□□□ -0.07
NFYA-201ENST00000341376 SOGA1O94964 1423 aa14.61□□□□□ -0.07
NFYA-201ENST00000341376 CEP162Q5TB80 1403 aa14.61□□□□□ -0.07
NFYA-201ENST00000341376 CCDC88BA6NC98 1476 aa14.56□□□□□ -0.08
NFYA-201ENST00000341376 ABCC8Q09428 1581 aa14.56□□□□□ -0.08
NFYA-201ENST00000341376 ATP1B4Q9UN42 357 aaPredicted RBP14.54□□□□□ -0.08
NFYA-201ENST00000341376 WIZO95785 1651 aa14.49□□□□□ -0.09
NFYA-201ENST00000341376 RUSC2Q8N2Y8 1516 aa14.49□□□□□ -0.09
NFYA-201ENST00000341376 HIRIP3Q9BW71 556 aaPredicted RBP14.43□□□□□ -0.1
NFYA-201ENST00000341376 TNIKQ9UKE5 1360 aa14.39□□□□□ -0.11
NFYA-201ENST00000341376 KCNH8Q96L42 1107 aa14.39□□□□□ -0.11
NFYA-201ENST00000341376 SUPT16HQ9Y5B9 1047 aaKnown RBP14.36□□□□□ -0.11
NFYA-201ENST00000341376 CLIP1P30622 1438 aa14.34□□□□□ -0.11
NFYA-201ENST00000341376 DDX10Q13206 875 aaKnown RBP14.32□□□□□ -0.12
NFYA-201ENST00000341376 FKBP8Q14318 412 aa14.31□□□□□ -0.12
NFYA-201ENST00000341376 CNGB1Q14028 1251 aaPredicted RBP14.3□□□□□ -0.12
NFYA-201ENST00000341376 TRIM52Q96A61 297 aa14.3□□□□□ -0.12
NFYA-201ENST00000341376 KANK4Q5T7N3 995 aaPredicted RBP14.29□□□□□ -0.12
NFYA-201ENST00000341376 FAM50AQ14320 339 aaKnown RBP14.29□□□□□ -0.12
NFYA-201ENST00000341376 P3H3Q8IVL6 736 aa14.29□□□□□ -0.12
NFYA-201ENST00000341376 BCL11AQ9H165 835 aa14.27□□□□□ -0.13
NFYA-201ENST00000341376 GOLGA3Q08378 1498 aa14.25□□□□□ -0.13
NFYA-201ENST00000341376 NEFLP07196 543 aa14.25□□□□□ -0.13
NFYA-201ENST00000341376 WRNQ14191 1432 aaPredicted RBP eCLIP14.25□□□□□ -0.13
NFYA-201ENST00000341376 SIN3AQ96ST3 1273 aa14.2□□□□□ -0.14
NFYA-201ENST00000341376 TSHZ2Q9NRE2 1034 aa14.2□□□□□ -0.14
NFYA-201ENST00000341376 IRX6P78412 446 aaPredicted RBP14.2□□□□□ -0.14
NFYA-201ENST00000341376 ERICH6Q7L0X2 663 aa14.17□□□□□ -0.14
NFYA-201ENST00000341376 BAZ1AQ9NRL2 1556 aaPredicted RBP14.17□□□□□ -0.14
NFYA-201ENST00000341376 NACADO15069 1562 aa14.13□□□□□ -0.15
NFYA-201ENST00000341376 RAPGEF2Q9Y4G8 1499 aa14.12□□□□□ -0.15
NFYA-201ENST00000341376 VPS8Q8N3P4 1428 aa14.1□□□□□ -0.15
NFYA-201ENST00000341376 EEA1Q15075 1411 aa14.1□□□□□ -0.15
NFYA-201ENST00000341376 CEP164Q9UPV0 1460 aa14.1□□□□□ -0.15
NFYA-201ENST00000341376 DHX57Q6P158 1386 aaKnown RBP14.09□□□□□ -0.15
NFYA-201ENST00000341376 SENP3-EIF4A1A0A087X0R7 540 aa14.09□□□□□ -0.15
NFYA-201ENST00000341376 ANP32EQ9BTT0 268 aa14.09□□□□□ -0.15
NFYA-201ENST00000341376 ANP32CO43423 234 aa14.05□□□□□ -0.16
NFYA-201ENST00000341376 TOP2AP11388 1531 aaKnown RBP14.05□□□□□ -0.16
NFYA-201ENST00000341376 POLR3GLQ9BT43 218 aa14.04□□□□□ -0.16
NFYA-201ENST00000341376 SMARCA2P51531 1590 aa14.03□□□□□ -0.16
NFYA-201ENST00000341376 ARID3CA6NKF2 412 aa14.01□□□□□ -0.17
NFYA-201ENST00000341376 HNRNPUQ00839 825 aaKnown RBP eCLIP14□□□□□ -0.17
NFYA-201ENST00000341376 RBM19Q9Y4C8 960 aaKnown RBP13.98□□□□□ -0.17
NFYA-201ENST00000341376 CCNB3Q8WWL7 1395 aa13.95□□□□□ -0.18
NFYA-201ENST00000341376 SMARCA4P51532 1647 aa13.95□□□□□ -0.18
NFYA-201ENST00000341376 RAB3GAP2Q9H2M9 1393 aa13.94□□□□□ -0.18
NFYA-201ENST00000341376 CHIC2Q9UKJ5 165 aa13.92□□□□□ -0.18
NFYA-201ENST00000341376 CLSPNQ9HAW4 1339 aa13.91□□□□□ -0.18
NFYA-201ENST00000341376 FAM9BQ8IZU0 186 aa13.91□□□□□ -0.18
NFYA-201ENST00000341376 KIF21BO75037 1637 aa13.9□□□□□ -0.19
NFYA-201ENST00000341376 SYNJ1O43426 1573 aa13.89□□□□□ -0.19
NFYA-201ENST00000341376 CDK11AQ9UQ88 783 aaPredicted RBP13.88□□□□□ -0.19
NFYA-201ENST00000341376 EIF4G1Q04637 1599 aaKnown RBP13.87□□□□□ -0.19
NFYA-201ENST00000341376 BAZ1BQ9UIG0 1483 aaKnown RBP13.86□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms