RNA–Protein interactions for RNA: ENST00000565543.1

LINC02259-202, Transcript of long intergenic non-protein coding RNA 2259, humanhuman

TSL 2 BASIC

Gene LINC02259, Length 438 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC02259-202ENST00000565543 AEBP2Q6ZN18 517 aaPredicted RBP31.69■■■□□ 2.66
LINC02259-202ENST00000565543 CHIC1Q5VXU3 224 aa29.81■■■□□ 2.36
LINC02259-202ENST00000565543 SENP3Q9H4L4 574 aaPredicted RBP27.15■■□□□ 1.94
LINC02259-202ENST00000565543 PHF23Q9BUL5 403 aaPredicted RBP26.74■■□□□ 1.87
LINC02259-202ENST00000565543 FOXD1Q16676 465 aa25.31■■□□□ 1.64
LINC02259-202ENST00000565543 MSH5O43196 834 aa23.86■■□□□ 1.41
LINC02259-202ENST00000565543 POTEDQ86YR6 584 aa23.79■■□□□ 1.4
LINC02259-202ENST00000565543 PLPPR3Q6T4P5 718 aa23.73■■□□□ 1.39
LINC02259-202ENST00000565543 PIAS4Q8N2W9 510 aaPredicted RBP23.65■■□□□ 1.38
LINC02259-202ENST00000565543 PPP6R1Q9UPN7 881 aa23.4■■□□□ 1.34
LINC02259-202ENST00000565543 ADRA2BP18089 450 aa23.35■■□□□ 1.33
LINC02259-202ENST00000565543 ABCC9O60706 1549 aa21.77■■□□□ 1.08
LINC02259-202ENST00000565543 DNAJC5BQ9UF47 199 aa21.75■■□□□ 1.07
LINC02259-202ENST00000565543 NISCHQ9Y2I1 1504 aa21.7■■□□□ 1.07
LINC02259-202ENST00000565543 MAPK8IP2Q13387 824 aaPredicted RBP21.54■■□□□ 1.04
LINC02259-202ENST00000565543 DMRT2Q9Y5R5 561 aa21.45■■□□□ 1.02
LINC02259-202ENST00000565543 SCAF1Q9H7N4 1312 aaKnown RBP21.42■■□□□ 1.02
LINC02259-202ENST00000565543 DNAJC5Q9H3Z4 198 aa21.03■□□□□ 0.96
LINC02259-202ENST00000565543 PPP4R3CPQ6ZMV5 832 aa20.75■□□□□ 0.91
LINC02259-202ENST00000565543 DCAF8L1A6NGE4 600 aa20.73■□□□□ 0.91
LINC02259-202ENST00000565543 CACNB1Q02641 598 aaPredicted RBP20.71■□□□□ 0.91
LINC02259-202ENST00000565543 HOXD11P31277 338 aaPredicted RBP20.51■□□□□ 0.87
LINC02259-202ENST00000565543 CNKSR2Q8WXI2 1034 aa20.43■□□□□ 0.86
LINC02259-202ENST00000565543 RNF216Q9NWF9 866 aaPredicted RBP20.31■□□□□ 0.84
LINC02259-202ENST00000565543 RNF39Q9H2S5 420 aa20.28■□□□□ 0.84
LINC02259-202ENST00000565543 CCDC180Q9P1Z9 1646 aa20.09■□□□□ 0.81
LINC02259-202ENST00000565543 PABPN1Q86U42 306 aaKnown RBP eCLIP20.07■□□□□ 0.8
LINC02259-202ENST00000565543 C1QBPQ07021 282 aaKnown RBP20■□□□□ 0.79
LINC02259-202ENST00000565543 RB1CC1Q8TDY2 1594 aa19.92■□□□□ 0.78
LINC02259-202ENST00000565543 NCBP3Q53F19 620 aaKnown RBP19.89■□□□□ 0.77
LINC02259-202ENST00000565543 CECR2Q9BXF3 1484 aa19.72■□□□□ 0.75
LINC02259-202ENST00000565543 TRIM41Q8WV44 630 aa19.68■□□□□ 0.74
LINC02259-202ENST00000565543 GRWD1Q9BQ67 446 aaKnown RBP eCLIP19.65■□□□□ 0.74
LINC02259-202ENST00000565543 NPM3O75607 178 aaKnown RBP19.55■□□□□ 0.72
LINC02259-202ENST00000565543 CC2D2AQ9P2K1 1620 aa19.51■□□□□ 0.71
LINC02259-202ENST00000565543 UNC13AQ9UPW8 1703 aa19.48■□□□□ 0.71
LINC02259-202ENST00000565543 BICRAQ9NZM4 1560 aa19.39■□□□□ 0.69
LINC02259-202ENST00000565543 NACADO15069 1562 aa19.36■□□□□ 0.69
LINC02259-202ENST00000565543 DCAF8L2P0C7V8 631 aa19.26■□□□□ 0.67
LINC02259-202ENST00000565543 CUX2O14529 1486 aa19.26■□□□□ 0.67
LINC02259-202ENST00000565543 U3KPZ7 1027 aaPredicted RBP19.13■□□□□ 0.65
LINC02259-202ENST00000565543 EIF4G1Q04637 1599 aaKnown RBP19.06■□□□□ 0.64
LINC02259-202ENST00000565543 CAPN15O75808 1086 aa19.02■□□□□ 0.64
LINC02259-202ENST00000565543 SPINK5Q9NQ38 1064 aaPredicted RBP18.96■□□□□ 0.63
LINC02259-202ENST00000565543 ERCC6Q03468 1493 aa18.91■□□□□ 0.62
LINC02259-202ENST00000565543 DSG3P32926 999 aa18.9■□□□□ 0.62
LINC02259-202ENST00000565543 KCNA4P22459 653 aa18.89■□□□□ 0.61
LINC02259-202ENST00000565543 SHROOM4Q9ULL8 1493 aa18.83■□□□□ 0.6
LINC02259-202ENST00000565543 SLC4A2P04920 1241 aa18.72■□□□□ 0.59
LINC02259-202ENST00000565543 APLP2Q06481 763 aa18.65■□□□□ 0.58
LINC02259-202ENST00000565543 TRHP20396 242 aaPredicted RBP18.64■□□□□ 0.57
LINC02259-202ENST00000565543 POTEHQ6S545 545 aa18.61■□□□□ 0.57
LINC02259-202ENST00000565543 ZNF219Q9P2Y4 722 aaPredicted RBP18.56■□□□□ 0.56
LINC02259-202ENST00000565543 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP18.54■□□□□ 0.56
LINC02259-202ENST00000565543 ABCB7O75027 752 aa18.54■□□□□ 0.56
LINC02259-202ENST00000565543 HNRNPUL2Q1KMD3 747 aaKnown RBP18.54■□□□□ 0.56
LINC02259-202ENST00000565543 MYO15BQ96JP2 1530 aa18.47■□□□□ 0.55
LINC02259-202ENST00000565543 SCRIBQ14160 1630 aa18.41■□□□□ 0.54
LINC02259-202ENST00000565543 SAMD1Q6SPF0 538 aaPredicted RBP18.4■□□□□ 0.54
LINC02259-202ENST00000565543 ILDR1Q86SU0 546 aaPredicted RBP18.39■□□□□ 0.53
LINC02259-202ENST00000565543 THOC2Q8NI27 1593 aaKnown RBP18.29■□□□□ 0.52
LINC02259-202ENST00000565543 NESP48681 1621 aa18.26■□□□□ 0.51
LINC02259-202ENST00000565543 OSCARQ8IYS5 282 aa18.2■□□□□ 0.5
LINC02259-202ENST00000565543 BAZ1AQ9NRL2 1556 aaPredicted RBP18.16■□□□□ 0.5
LINC02259-202ENST00000565543 SMARCA2P51531 1590 aa18.15■□□□□ 0.5
LINC02259-202ENST00000565543 RIMBP3CA6NJZ7 1639 aa18.14■□□□□ 0.49
LINC02259-202ENST00000565543 RIMBP3BA6NNM3 1639 aa18.14■□□□□ 0.49
LINC02259-202ENST00000565543 RIMBP3Q9UFD9 1639 aa18.14■□□□□ 0.49
LINC02259-202ENST00000565543 MYCNP04198 464 aaPredicted RBP18.12■□□□□ 0.49
LINC02259-202ENST00000565543 RBM42Q9BTD8 480 aaKnown RBP18.1■□□□□ 0.49
LINC02259-202ENST00000565543 POLA2Q14181 598 aa18.03■□□□□ 0.48
LINC02259-202ENST00000565543 CYB5RLQ6IPT4 315 aa17.96■□□□□ 0.47
LINC02259-202ENST00000565543 KIF21AQ7Z4S6 1674 aa17.93■□□□□ 0.46
LINC02259-202ENST00000565543 ARHGEF11O15085 1522 aa17.91■□□□□ 0.46
LINC02259-202ENST00000565543 NCAPD3P42695 1498 aa17.88■□□□□ 0.45
LINC02259-202ENST00000565543 SLC4A1APQ9BWU0 796 aaKnown RBP17.81■□□□□ 0.44
LINC02259-202ENST00000565543 CHRDL2Q6WN34 429 aa17.8■□□□□ 0.44
LINC02259-202ENST00000565543 LAMC3Q9Y6N6 1575 aa17.75■□□□□ 0.43
LINC02259-202ENST00000565543 FOXD4L1Q9NU39 408 aa17.75■□□□□ 0.43
LINC02259-202ENST00000565543 PDS5BQ9NTI5 1447 aa17.74■□□□□ 0.43
LINC02259-202ENST00000565543 DCAF1Q9Y4B6 1507 aa17.71■□□□□ 0.43
LINC02259-202ENST00000565543 MRC2Q9UBG0 1479 aa17.69■□□□□ 0.42
LINC02259-202ENST00000565543 ATF5Q9Y2D1 282 aaPredicted RBP17.68■□□□□ 0.42
LINC02259-202ENST00000565543 ATAD2BQ9ULI0 1458 aa17.67■□□□□ 0.42
LINC02259-202ENST00000565543 WDR62O43379 1518 aa17.66■□□□□ 0.42
LINC02259-202ENST00000565543 ZBTB12Q9Y330 459 aaPredicted RBP17.65■□□□□ 0.42
LINC02259-202ENST00000565543 ZCCHC6Q5VYS8 1495 aaKnown RBP17.64■□□□□ 0.41
LINC02259-202ENST00000565543 ARAP1Q96P48 1450 aa17.63■□□□□ 0.41
LINC02259-202ENST00000565543 HMGXB3Q12766 1538 aa17.62■□□□□ 0.41
LINC02259-202ENST00000565543 AKT1S1Q96B36 256 aa17.58■□□□□ 0.4
LINC02259-202ENST00000565543 BAZ1BQ9UIG0 1483 aaKnown RBP17.46■□□□□ 0.39
LINC02259-202ENST00000565543 REM2Q8IYK8 340 aaPredicted RBP17.41■□□□□ 0.38
LINC02259-202ENST00000565543 LMTK3Q96Q04 1460 aa17.36■□□□□ 0.37
LINC02259-202ENST00000565543 CEP164Q9UPV0 1460 aa17.34■□□□□ 0.37
LINC02259-202ENST00000565543 CADPSQ9ULU8 1353 aa17.32■□□□□ 0.36
LINC02259-202ENST00000565543 ZBTB22O15209 634 aa17.32■□□□□ 0.36
LINC02259-202ENST00000565543 KDM4FA0A1W2PPD8 638 aa17.3■□□□□ 0.36
LINC02259-202ENST00000565543 SP7Q8TDD2 431 aaPredicted RBP17.3■□□□□ 0.36
LINC02259-202ENST00000565543 PIP4P2Q8N4L2 257 aa17.29■□□□□ 0.36
LINC02259-202ENST00000565543 SMARCA4P51532 1647 aa17.28■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms