Protein–RNA interactions for Protein: Q8TAP4

LMO3, LIM domain only protein 3, humanhuman

Predictions only

Length 145 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LMO3Q8TAP4 RPSAP63-201ENST00000412013 888 ntBASIC9.95□□□□□ -0.82
LMO3Q8TAP4 MED15P4-201ENST00000417579 393 ntBASIC9.95□□□□□ -0.82
LMO3Q8TAP4 Z73361.1-201ENST00000423690 612 ntBASIC9.95□□□□□ -0.82
LMO3Q8TAP4 AL355310.1-201ENST00000436416 596 ntTSL 3 BASIC9.95□□□□□ -0.82
LMO3Q8TAP4 AC136896.1-201ENST00000438334 547 ntBASIC9.95□□□□□ -0.82
LMO3Q8TAP4 AL109754.1-201ENST00000449270 1036 ntTSL 2 BASIC9.95□□□□□ -0.82
LMO3Q8TAP4 PRDX2P1-201ENST00000450181 589 ntBASIC9.95□□□□□ -0.82
LMO3Q8TAP4 AP001464.1-201ENST00000457565 323 ntTSL 5 BASIC9.95□□□□□ -0.82
LMO3Q8TAP4 CREB3L2-205ENST00000458726 776 ntTSL 3 BASIC9.95□□□□□ -0.82
LMO3Q8TAP4 AC018638.2-201ENST00000471258 403 ntBASIC9.95□□□□□ -0.82
LMO3Q8TAP4 TUBB4BP5-201ENST00000512282 427 ntBASIC9.95□□□□□ -0.82
LMO3Q8TAP4 CSNK1A1-206ENST00000515748 620 ntTSL 2 BASIC9.95□□□□□ -0.82
LMO3Q8TAP4 IGLV3-13-201ENST00000518475 223 ntBASIC9.95□□□□□ -0.82
LMO3Q8TAP4 AC021915.1-201ENST00000522541 824 ntTSL 1 (best) BASIC9.95□□□□□ -0.82
LMO3Q8TAP4 AP003063.1-201ENST00000528496 855 ntTSL 1 (best) BASIC9.95□□□□□ -0.82
LMO3Q8TAP4 AC087521.2-203ENST00000530450 593 ntTSL 4 BASIC9.95□□□□□ -0.82
LMO3Q8TAP4 RTN4IP1-204ENST00000539449 814 ntTSL 2 BASIC9.95□□□□□ -0.82
LMO3Q8TAP4 AC025682.1-204ENST00000580045 733 ntTSL 5 BASIC9.95□□□□□ -0.82
LMO3Q8TAP4 EIF3K-211ENST00000592558 670 ntTSL 2 BASIC9.95□□□□□ -0.82
LMO3Q8TAP4 SDCBP2-AS1-202ENST00000607947 808 ntTSL 3 BASIC9.95□□□□□ -0.82
LMO3Q8TAP4 MIR6742-201ENST00000622338 62 ntBASIC9.95□□□□□ -0.82
LMO3Q8TAP4 AC012629.4-201ENST00000623327 259 ntBASIC9.95□□□□□ -0.82
LMO3Q8TAP4 GTF2B-201ENST00000370500 1351 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
LMO3Q8TAP4 COMMD3-BMI1-205ENST00000602390 1419 ntAPPRIS P1 TSL 2 BASIC9.95□□□□□ -0.82
LMO3Q8TAP4 EIF5A2-201ENST00000295822 5593 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
LMO3Q8TAP4 FBN2-201ENST00000262464 10724 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
LMO3Q8TAP4 SVIL-203ENST00000375400 6729 ntAPPRIS ALT2 TSL 1 (best) BASIC9.95□□□□□ -0.82
LMO3Q8TAP4 KLHL12-202ENST00000367259 2257 ntTSL 2 BASIC9.95□□□□□ -0.82
LMO3Q8TAP4 ZNF252P-208ENST00000592792 2485 ntBASIC9.95□□□□□ -0.82
LMO3Q8TAP4 LINC00484-205ENST00000423719 3023 ntTSL 2 BASIC9.95□□□□□ -0.82
LMO3Q8TAP4 CYB5R4-202ENST00000369681 9252 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
LMO3Q8TAP4 DIP2C-201ENST00000280886 7888 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
LMO3Q8TAP4 CSNK2A1-202ENST00000349736 4299 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
LMO3Q8TAP4 ZNF200-204ENST00000414144 3306 ntAPPRIS P3 TSL 1 (best) BASIC9.94□□□□□ -0.82
LMO3Q8TAP4 SERPINB6-202ENST00000380520 3265 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
LMO3Q8TAP4 GFM2-202ENST00000345239 2856 ntTSL 1 (best) BASIC9.94□□□□□ -0.82
LMO3Q8TAP4 HS3ST5-202ENST00000411826 2744 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
LMO3Q8TAP4 RND3-203ENST00000409557 2372 ntTSL 1 (best) BASIC9.94□□□□□ -0.82
LMO3Q8TAP4 SH3GL3-201ENST00000324537 2012 ntTSL 2 BASIC9.94□□□□□ -0.82
LMO3Q8TAP4 THSD7B-203ENST00000413152 5846 ntTSL 5 BASIC9.94□□□□□ -0.82
LMO3Q8TAP4 LPIN1-201ENST00000256720 5384 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
LMO3Q8TAP4 SCN5A-203ENST00000413689 8504 ntAPPRIS ALT1 TSL 5 BASIC9.94□□□□□ -0.82
LMO3Q8TAP4 LINC01572-206ENST00000624829 1666 ntTSL 5 BASIC9.94□□□□□ -0.82
LMO3Q8TAP4 PCNT-201ENST00000359568 10560 ntAPPRIS P2 TSL 1 (best) BASIC9.94□□□□□ -0.82
LMO3Q8TAP4 LRTM1-201ENST00000273286 1423 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
LMO3Q8TAP4 LIPM-201ENST00000404743 1439 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
LMO3Q8TAP4 ICOSLG-204ENST00000407780 7080 ntAPPRIS P3 TSL 1 (best) BASIC9.94□□□□□ -0.82
LMO3Q8TAP4 AL160408.1-201ENST00000417805 1373 ntTSL 1 (best) BASIC9.94□□□□□ -0.82
LMO3Q8TAP4 CDCA3-204ENST00000535406 1327 ntAPPRIS P1 TSL 2 BASIC9.94□□□□□ -0.82
LMO3Q8TAP4 CRIP3-201ENST00000274990 800 ntTSL 1 (best) BASIC9.94□□□□□ -0.82
LMO3Q8TAP4 IL13-201ENST00000304506 1283 ntAPPRIS P2 TSL 1 (best) BASIC9.94□□□□□ -0.82
LMO3Q8TAP4 NECAP1P1-201ENST00000320802 830 ntBASIC9.94□□□□□ -0.82
LMO3Q8TAP4 DYNLL1-202ENST00000392508 697 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
LMO3Q8TAP4 RPL36A-HNRNPH2-201ENST00000409170 562 ntAPPRIS P1 TSL 4 BASIC9.94□□□□□ -0.82
LMO3Q8TAP4 RN7SKP270-201ENST00000411297 312 ntBASIC9.94□□□□□ -0.82
LMO3Q8TAP4 AC073316.2-201ENST00000414126 418 ntTSL 2 BASIC9.94□□□□□ -0.82
LMO3Q8TAP4 AC245884.5-201ENST00000417373 170 ntBASIC9.94□□□□□ -0.82
LMO3Q8TAP4 AL592049.1-201ENST00000422490 1188 ntBASIC9.94□□□□□ -0.82
LMO3Q8TAP4 AC009495.1-201ENST00000428888 372 ntTSL 5 BASIC9.94□□□□□ -0.82
LMO3Q8TAP4 SNRPG-204ENST00000438261 515 ntTSL 2 BASIC9.94□□□□□ -0.82
LMO3Q8TAP4 GYG1P3-201ENST00000449769 994 ntBASIC9.94□□□□□ -0.82
LMO3Q8TAP4 VDAC1P12-201ENST00000451853 882 ntBASIC9.94□□□□□ -0.82
LMO3Q8TAP4 RIIAD1-206ENST00000479191 449 ntAPPRIS P1 TSL 2 BASIC9.94□□□□□ -0.82
LMO3Q8TAP4 AC121161.2-201ENST00000502566 659 ntTSL 3 BASIC9.94□□□□□ -0.82
LMO3Q8TAP4 PGAM1P1-201ENST00000504014 556 ntBASIC9.94□□□□□ -0.82
LMO3Q8TAP4 OCIAD1-210ENST00000506801 571 ntTSL 2 BASIC9.94□□□□□ -0.82
LMO3Q8TAP4 LINC01606-206ENST00000520929 411 ntTSL 3 BASIC9.94□□□□□ -0.82
LMO3Q8TAP4 AC090921.1-201ENST00000523703 1195 ntTSL 1 (best) BASIC9.94□□□□□ -0.82
LMO3Q8TAP4 AC009806.1-201ENST00000526112 519 ntTSL 3 BASIC9.94□□□□□ -0.82
LMO3Q8TAP4 LINC00520-202ENST00000554196 514 ntTSL 3 BASIC9.94□□□□□ -0.82
LMO3Q8TAP4 AP4S1-206ENST00000554609 1012 ntTSL 5 BASIC9.94□□□□□ -0.82
LMO3Q8TAP4 AC009075.1-201ENST00000563347 391 ntTSL 3 BASIC9.94□□□□□ -0.82
LMO3Q8TAP4 AC099518.5-201ENST00000567236 1137 ntTSL 3 BASIC9.94□□□□□ -0.82
LMO3Q8TAP4 USP2-AS1-204ENST00000577297 689 ntTSL 3 BASIC9.94□□□□□ -0.82
LMO3Q8TAP4 MIR4253-201ENST00000581187 68 ntBASIC9.94□□□□□ -0.82
LMO3Q8TAP4 MIR2467-201ENST00000584559 81 ntBASIC9.94□□□□□ -0.82
LMO3Q8TAP4 AC010615.2-204ENST00000600469 830 ntTSL 3 BASIC9.94□□□□□ -0.82
LMO3Q8TAP4 AC018648.1-201ENST00000608314 668 ntBASIC9.94□□□□□ -0.82
LMO3Q8TAP4 MIR6848-201ENST00000611213 70 ntBASIC9.94□□□□□ -0.82
LMO3Q8TAP4 AC027345.1-201ENST00000611900 500 ntBASIC9.94□□□□□ -0.82
LMO3Q8TAP4 ST7-AS1_2.1-201ENST00000615247 111 ntBASIC9.94□□□□□ -0.82
LMO3Q8TAP4 AC010087.1-201ENST00000618630 438 ntBASIC9.94□□□□□ -0.82
LMO3Q8TAP4 STARD4-212ENST00000512160 3500 ntTSL 2 BASIC9.94□□□□□ -0.82
LMO3Q8TAP4 VCL-201ENST00000211998 5490 ntAPPRIS P4 TSL 1 (best) BASIC9.94□□□□□ -0.82
LMO3Q8TAP4 MASP1-203ENST00000337774 5276 ntAPPRIS ALT2 TSL 1 (best) BASIC9.94□□□□□ -0.82
LMO3Q8TAP4 MIGA1-201ENST00000370791 5288 ntAPPRIS P3 TSL 1 (best) BASIC9.94□□□□□ -0.82
LMO3Q8TAP4 SYT14-202ENST00000367019 2997 ntAPPRIS ALT2 TSL 1 (best) BASIC9.94□□□□□ -0.82
LMO3Q8TAP4 KCNJ15-207ENST00000398934 2815 ntAPPRIS P1 TSL 3 BASIC9.94□□□□□ -0.82
LMO3Q8TAP4 HSP90AB1-201ENST00000353801 2582 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
LMO3Q8TAP4 TRERF1-201ENST00000340840 4174 ntTSL 5 BASIC9.94□□□□□ -0.82
LMO3Q8TAP4 PTAFR-203ENST00000539896 4191 ntAPPRIS P1 TSL 2 BASIC9.94□□□□□ -0.82
LMO3Q8TAP4 AC003958.2-202ENST00000432258 3890 ntTSL 2 BASIC9.94□□□□□ -0.82
LMO3Q8TAP4 BAZ2A-211ENST00000549884 6050 ntAPPRIS ALT2 TSL 2 BASIC9.94□□□□□ -0.82
LMO3Q8TAP4 RAP2C-205ENST00000620646 3341 ntTSL 5 BASIC9.94□□□□□ -0.82
LMO3Q8TAP4 AC104806.2-201ENST00000502400 1991 ntTSL 2 BASIC9.94□□□□□ -0.82
LMO3Q8TAP4 PDPN-201ENST00000294489 3104 ntAPPRIS P3 TSL 1 (best) BASIC9.93□□□□□ -0.82
LMO3Q8TAP4 TSPAN14-206ENST00000372164 5476 ntTSL 1 (best) BASIC9.93□□□□□ -0.82
LMO3Q8TAP4 UBE2N-205ENST00000550657 3018 ntTSL 2 BASIC9.93□□□□□ -0.82
LMO3Q8TAP4 DDX3X-217ENST00000629496 5023 ntAPPRIS P1 TSL 5 BASIC9.93□□□□□ -0.82
LMO3Q8TAP4 FMO8P-201ENST00000434461 1600 ntBASIC9.93□□□□□ -0.82
Retrieved 100 of 98,524 protein–RNA pairs in 62.3 ms