RNA–Protein interactions for RNA: ENST00000528496.1

AP003063.1-201, humanhuman

TSL 1 (best) BASIC

Gene AP003063.1, Length 855 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP003063.1-201ENST00000528496 AEBP2Q6ZN18 517 aaPredicted RBP23.76■■□□□ 1.39
AP003063.1-201ENST00000528496 CHIC1Q5VXU3 224 aa23.19■■□□□ 1.3
AP003063.1-201ENST00000528496 SENP3Q9H4L4 574 aaPredicted RBP20.51■□□□□ 0.87
AP003063.1-201ENST00000528496 NISCHQ9Y2I1 1504 aa20.46■□□□□ 0.87
AP003063.1-201ENST00000528496 PHF23Q9BUL5 403 aaPredicted RBP20.38■□□□□ 0.85
AP003063.1-201ENST00000528496 POTEDQ86YR6 584 aa20.1■□□□□ 0.81
AP003063.1-201ENST00000528496 FOXD1Q16676 465 aa19.23■□□□□ 0.67
AP003063.1-201ENST00000528496 PLPPR3Q6T4P5 718 aa18.92■□□□□ 0.62
AP003063.1-201ENST00000528496 MSH5O43196 834 aa18.51■□□□□ 0.55
AP003063.1-201ENST00000528496 CCDC180Q9P1Z9 1646 aa18.29■□□□□ 0.52
AP003063.1-201ENST00000528496 ABCC9O60706 1549 aa18.08■□□□□ 0.48
AP003063.1-201ENST00000528496 ADRA2BP18089 450 aa18.02■□□□□ 0.48
AP003063.1-201ENST00000528496 PPP6R1Q9UPN7 881 aa17.98■□□□□ 0.47
AP003063.1-201ENST00000528496 PIAS4Q8N2W9 510 aaPredicted RBP17.7■□□□□ 0.42
AP003063.1-201ENST00000528496 RB1CC1Q8TDY2 1594 aa17.32■□□□□ 0.36
AP003063.1-201ENST00000528496 NACADO15069 1562 aa17.24■□□□□ 0.35
AP003063.1-201ENST00000528496 DCAF8L2P0C7V8 631 aa17.22■□□□□ 0.35
AP003063.1-201ENST00000528496 MYO15BQ96JP2 1530 aa17.06■□□□□ 0.32
AP003063.1-201ENST00000528496 ZCCHC6Q5VYS8 1495 aaKnown RBP16.99■□□□□ 0.31
AP003063.1-201ENST00000528496 DCAF1Q9Y4B6 1507 aa16.92■□□□□ 0.3
AP003063.1-201ENST00000528496 UNC13AQ9UPW8 1703 aa16.88■□□□□ 0.29
AP003063.1-201ENST00000528496 PABPN1Q86U42 306 aaKnown RBP eCLIP16.85■□□□□ 0.29
AP003063.1-201ENST00000528496 BICRAQ9NZM4 1560 aa16.76■□□□□ 0.27
AP003063.1-201ENST00000528496 DNAJC5BQ9UF47 199 aa16.72■□□□□ 0.27
AP003063.1-201ENST00000528496 PPP4R3CPQ6ZMV5 832 aa16.69■□□□□ 0.26
AP003063.1-201ENST00000528496 SCRIBQ14160 1630 aa16.67■□□□□ 0.26
AP003063.1-201ENST00000528496 CACNB1Q02641 598 aaPredicted RBP16.62■□□□□ 0.25
AP003063.1-201ENST00000528496 SHROOM4Q9ULL8 1493 aa16.61■□□□□ 0.25
AP003063.1-201ENST00000528496 SCAF1Q9H7N4 1312 aaKnown RBP16.53■□□□□ 0.24
AP003063.1-201ENST00000528496 KCNA4P22459 653 aa16.41■□□□□ 0.22
AP003063.1-201ENST00000528496 EIF4G1Q04637 1599 aaKnown RBP16.35■□□□□ 0.21
AP003063.1-201ENST00000528496 CC2D2AQ9P2K1 1620 aa16.34■□□□□ 0.21
AP003063.1-201ENST00000528496 NCBP3Q53F19 620 aaKnown RBP16.33■□□□□ 0.2
AP003063.1-201ENST00000528496 MAPK8IP2Q13387 824 aaPredicted RBP16.32■□□□□ 0.2
AP003063.1-201ENST00000528496 CECR2Q9BXF3 1484 aa16.27■□□□□ 0.19
AP003063.1-201ENST00000528496 CNKSR2Q8WXI2 1034 aa16.19■□□□□ 0.18
AP003063.1-201ENST00000528496 DMRT2Q9Y5R5 561 aa16.07■□□□□ 0.16
AP003063.1-201ENST00000528496 NPM3O75607 178 aaKnown RBP16.02■□□□□ 0.16
AP003063.1-201ENST00000528496 SMARCA4P51532 1647 aa15.92■□□□□ 0.14
AP003063.1-201ENST00000528496 NCAPD3P42695 1498 aa15.91■□□□□ 0.14
AP003063.1-201ENST00000528496 BAZ1AQ9NRL2 1556 aaPredicted RBP15.88■□□□□ 0.13
AP003063.1-201ENST00000528496 ATAD2BQ9ULI0 1458 aa15.88■□□□□ 0.13
AP003063.1-201ENST00000528496 SMARCA2P51531 1590 aa15.87■□□□□ 0.13
AP003063.1-201ENST00000528496 RNF216Q9NWF9 866 aaPredicted RBP15.82■□□□□ 0.12
AP003063.1-201ENST00000528496 HMGXB3Q12766 1538 aa15.81■□□□□ 0.12
AP003063.1-201ENST00000528496 BAZ1BQ9UIG0 1483 aaKnown RBP15.76■□□□□ 0.11
AP003063.1-201ENST00000528496 MROH2BQ7Z745 1585 aa15.75■□□□□ 0.11
AP003063.1-201ENST00000528496 PEG3Q9GZU2 1588 aa15.75■□□□□ 0.11
AP003063.1-201ENST00000528496 SUPT5HO00267 1087 aaKnown RBP15.74■□□□□ 0.11
AP003063.1-201ENST00000528496 HOXD11P31277 338 aaPredicted RBP15.7■□□□□ 0.1
AP003063.1-201ENST00000528496 SLC4A1APQ9BWU0 796 aaKnown RBP15.69■□□□□ 0.1
AP003063.1-201ENST00000528496 RNF39Q9H2S5 420 aa15.66■□□□□ 0.1
AP003063.1-201ENST00000528496 ERCC6Q03468 1493 aa15.63■□□□□ 0.09
AP003063.1-201ENST00000528496 WIZO95785 1651 aa15.57■□□□□ 0.08
AP003063.1-201ENST00000528496 NESP48681 1621 aa15.57■□□□□ 0.08
AP003063.1-201ENST00000528496 POTEHQ6S545 545 aa15.53■□□□□ 0.08
AP003063.1-201ENST00000528496 LAMC3Q9Y6N6 1575 aa15.53■□□□□ 0.08
AP003063.1-201ENST00000528496 DCAF8L1A6NGE4 600 aa15.52■□□□□ 0.08
AP003063.1-201ENST00000528496 CUX2O14529 1486 aa15.52■□□□□ 0.07
AP003063.1-201ENST00000528496 RSF1Q96T23 1441 aaPredicted RBP15.51■□□□□ 0.07
AP003063.1-201ENST00000528496 PDS5BQ9NTI5 1447 aa15.44■□□□□ 0.06
AP003063.1-201ENST00000528496 CADPSQ9ULU8 1353 aa15.44■□□□□ 0.06
AP003063.1-201ENST00000528496 EHMT2Q96KQ7 1210 aa15.42■□□□□ 0.06
AP003063.1-201ENST00000528496 TOP2AP11388 1531 aaKnown RBP15.42■□□□□ 0.06
AP003063.1-201ENST00000528496 KIF21AQ7Z4S6 1674 aa15.39■□□□□ 0.05
AP003063.1-201ENST00000528496 C1QBPQ07021 282 aaKnown RBP15.39■□□□□ 0.05
AP003063.1-201ENST00000528496 THOC2Q8NI27 1593 aaKnown RBP15.38■□□□□ 0.05
AP003063.1-201ENST00000528496 CFTRP13569 1480 aa15.29■□□□□ 0.04
AP003063.1-201ENST00000528496 MRC2Q9UBG0 1479 aa15.29■□□□□ 0.04
AP003063.1-201ENST00000528496 CEP164Q9UPV0 1460 aa15.27■□□□□ 0.04
AP003063.1-201ENST00000528496 FANCD2Q9BXW9 1451 aa15.27■□□□□ 0.03
AP003063.1-201ENST00000528496 DNAJC5Q9H3Z4 198 aa15.25■□□□□ 0.03
AP003063.1-201ENST00000528496 CCDC88BA6NC98 1476 aa15.23■□□□□ 0.03
AP003063.1-201ENST00000528496 WDR62O43379 1518 aa15.22■□□□□ 0.03
AP003063.1-201ENST00000528496 PRDM2Q13029 1718 aa15.17■□□□□ 0.02
AP003063.1-201ENST00000528496 GRWD1Q9BQ67 446 aaKnown RBP eCLIP15.11■□□□□ 0.01
AP003063.1-201ENST00000528496 URB2Q14146 1524 aaKnown RBP15.1■□□□□ 0.01
AP003063.1-201ENST00000528496 SLC4A2P04920 1241 aa15.07■□□□□ 0
AP003063.1-201ENST00000528496 CSRNP3Q8WYN3 585 aa15.07■□□□□ 0
AP003063.1-201ENST00000528496 FOXD4L1Q9NU39 408 aa15.07■□□□□ 0
AP003063.1-201ENST00000528496 HRCP23327 699 aa15.06■□□□□ 0
AP003063.1-201ENST00000528496 ZBTB22O15209 634 aa15.05■□□□□ -0
AP003063.1-201ENST00000528496 ABCC8Q09428 1581 aa15.01□□□□□ -0.01
AP003063.1-201ENST00000528496 TOPBP1Q92547 1522 aa14.99□□□□□ -0.01
AP003063.1-201ENST00000528496 DNMBPQ6XZF7 1577 aa14.97□□□□□ -0.01
AP003063.1-201ENST00000528496 IFT140Q96RY7 1462 aa14.95□□□□□ -0.02
AP003063.1-201ENST00000528496 ZNF608Q9ULD9 1512 aaPredicted RBP14.87□□□□□ -0.03
AP003063.1-201ENST00000528496 PCGF6Q9BYE7 350 aa14.87□□□□□ -0.03
AP003063.1-201ENST00000528496 POLA1P09884 1462 aaPredicted RBP14.84□□□□□ -0.03
AP003063.1-201ENST00000528496 OSCARQ8IYS5 282 aa14.84□□□□□ -0.03
AP003063.1-201ENST00000528496 LOC105371045A0A1W2PR82 267 aa14.83□□□□□ -0.04
AP003063.1-201ENST00000528496 TARBP1Q13395 1621 aaKnown RBP14.83□□□□□ -0.04
AP003063.1-201ENST00000528496 EIF4G3O43432 1585 aaKnown RBP14.82□□□□□ -0.04
AP003063.1-201ENST00000528496 MYCNP04198 464 aaPredicted RBP14.82□□□□□ -0.04
AP003063.1-201ENST00000528496 SOGA1O94964 1423 aa14.8□□□□□ -0.04
AP003063.1-201ENST00000528496 CUX1P39880 1505 aa14.8□□□□□ -0.04
AP003063.1-201ENST00000528496 FGD5Q6ZNL6 1462 aa14.79□□□□□ -0.04
AP003063.1-201ENST00000528496 TRIM41Q8WV44 630 aa14.79□□□□□ -0.04
AP003063.1-201ENST00000528496 AQRO60306 1485 aaKnown RBP eCLIP14.78□□□□□ -0.04
AP003063.1-201ENST00000528496 RAD54L2Q9Y4B4 1467 aa14.78□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms