RNA–Protein interactions for RNA: ENST00000554196.1

LINC00520-202, long intergenic non-protein coding RNA 520, humanhuman

TSL 3 BASIC

Gene LINC00520, Length 514 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00520-202ENST00000554196 NISCHQ9Y2I1 1504 aa20.94■□□□□ 0.94
LINC00520-202ENST00000554196 AEBP2Q6ZN18 517 aaPredicted RBP19.71■□□□□ 0.75
LINC00520-202ENST00000554196 CHIC1Q5VXU3 224 aa18.79■□□□□ 0.6
LINC00520-202ENST00000554196 CCDC180Q9P1Z9 1646 aa18.49■□□□□ 0.55
LINC00520-202ENST00000554196 ZCCHC6Q5VYS8 1495 aaKnown RBP17.64■□□□□ 0.41
LINC00520-202ENST00000554196 DCAF1Q9Y4B6 1507 aa17.44■□□□□ 0.38
LINC00520-202ENST00000554196 MYO15BQ96JP2 1530 aa17.25■□□□□ 0.35
LINC00520-202ENST00000554196 ABCC9O60706 1549 aa17.11■□□□□ 0.33
LINC00520-202ENST00000554196 NACADO15069 1562 aa17.09■□□□□ 0.33
LINC00520-202ENST00000554196 SENP3Q9H4L4 574 aaPredicted RBP17.07■□□□□ 0.32
LINC00520-202ENST00000554196 DCAF8L2P0C7V8 631 aa16.95■□□□□ 0.3
LINC00520-202ENST00000554196 RB1CC1Q8TDY2 1594 aa16.94■□□□□ 0.3
LINC00520-202ENST00000554196 SHROOM4Q9ULL8 1493 aa16.83■□□□□ 0.28
LINC00520-202ENST00000554196 SCRIBQ14160 1630 aa16.79■□□□□ 0.28
LINC00520-202ENST00000554196 PHF23Q9BUL5 403 aaPredicted RBP16.74■□□□□ 0.27
LINC00520-202ENST00000554196 UNC13AQ9UPW8 1703 aa16.68■□□□□ 0.26
LINC00520-202ENST00000554196 BICRAQ9NZM4 1560 aa16.34■□□□□ 0.21
LINC00520-202ENST00000554196 BAZ1AQ9NRL2 1556 aaPredicted RBP16.24■□□□□ 0.19
LINC00520-202ENST00000554196 SUPT5HO00267 1087 aaKnown RBP16.18■□□□□ 0.18
LINC00520-202ENST00000554196 SMARCA4P51532 1647 aa16.16■□□□□ 0.18
LINC00520-202ENST00000554196 RSF1Q96T23 1441 aaPredicted RBP16.15■□□□□ 0.18
LINC00520-202ENST00000554196 CECR2Q9BXF3 1484 aa16.14■□□□□ 0.17
LINC00520-202ENST00000554196 MROH2BQ7Z745 1585 aa16.11■□□□□ 0.17
LINC00520-202ENST00000554196 WIZO95785 1651 aa16.05■□□□□ 0.16
LINC00520-202ENST00000554196 PEG3Q9GZU2 1588 aa16■□□□□ 0.15
LINC00520-202ENST00000554196 PABPN1Q86U42 306 aaKnown RBP eCLIP15.98■□□□□ 0.15
LINC00520-202ENST00000554196 TOP2AP11388 1531 aaKnown RBP15.95■□□□□ 0.14
LINC00520-202ENST00000554196 SMARCA2P51531 1590 aa15.9■□□□□ 0.14
LINC00520-202ENST00000554196 EIF4G1Q04637 1599 aaKnown RBP15.87■□□□□ 0.13
LINC00520-202ENST00000554196 ATAD2BQ9ULI0 1458 aa15.78■□□□□ 0.12
LINC00520-202ENST00000554196 HMGXB3Q12766 1538 aa15.78■□□□□ 0.12
LINC00520-202ENST00000554196 FOXD1Q16676 465 aa15.77■□□□□ 0.12
LINC00520-202ENST00000554196 BAZ1BQ9UIG0 1483 aaKnown RBP15.73■□□□□ 0.11
LINC00520-202ENST00000554196 NCAPD3P42695 1498 aa15.66■□□□□ 0.1
LINC00520-202ENST00000554196 CCDC88BA6NC98 1476 aa15.64■□□□□ 0.09
LINC00520-202ENST00000554196 CC2D2AQ9P2K1 1620 aa15.62■□□□□ 0.09
LINC00520-202ENST00000554196 PRDM2Q13029 1718 aa15.57■□□□□ 0.08
LINC00520-202ENST00000554196 ABCC8Q09428 1581 aa15.33■□□□□ 0.05
LINC00520-202ENST00000554196 CFTRP13569 1480 aa15.32■□□□□ 0.04
LINC00520-202ENST00000554196 TRIM41Q8WV44 630 aa15.29■□□□□ 0.04
LINC00520-202ENST00000554196 BIVM-ERCC5R4GMW8 1640 aa15.28■□□□□ 0.04
LINC00520-202ENST00000554196 WRNQ14191 1432 aaPredicted RBP eCLIP15.26■□□□□ 0.03
LINC00520-202ENST00000554196 LAMC3Q9Y6N6 1575 aa15.24■□□□□ 0.03
LINC00520-202ENST00000554196 TOP2BQ02880 1626 aa15.24■□□□□ 0.03
LINC00520-202ENST00000554196 SYNJ1O43426 1573 aa15.24■□□□□ 0.03
LINC00520-202ENST00000554196 CADPSQ9ULU8 1353 aa15.21■□□□□ 0.02
LINC00520-202ENST00000554196 EEA1Q15075 1411 aa15.16■□□□□ 0.02
LINC00520-202ENST00000554196 CUX1P39880 1505 aa15.1■□□□□ 0.01
LINC00520-202ENST00000554196 FANCD2Q9BXW9 1451 aa15.08■□□□□ 0.01
LINC00520-202ENST00000554196 PLPPR3Q6T4P5 718 aa15.06■□□□□ 0
LINC00520-202ENST00000554196 DNMBPQ6XZF7 1577 aa15.06■□□□□ 0
LINC00520-202ENST00000554196 KIF21AQ7Z4S6 1674 aa15.06■□□□□ 0
LINC00520-202ENST00000554196 CEP164Q9UPV0 1460 aa15.04■□□□□ -0
LINC00520-202ENST00000554196 NESP48681 1621 aa15.03■□□□□ -0
LINC00520-202ENST00000554196 PDS5BQ9NTI5 1447 aa15.01□□□□□ -0.01
LINC00520-202ENST00000554196 KIF21BO75037 1637 aa15□□□□□ -0.01
LINC00520-202ENST00000554196 MSH5O43196 834 aa14.97□□□□□ -0.01
LINC00520-202ENST00000554196 SOGA1O94964 1423 aa14.95□□□□□ -0.02
LINC00520-202ENST00000554196 TOPBP1Q92547 1522 aa14.95□□□□□ -0.02
LINC00520-202ENST00000554196 WDR97A6NE52 1622 aa14.94□□□□□ -0.02
LINC00520-202ENST00000554196 FGD5Q6ZNL6 1462 aa14.94□□□□□ -0.02
LINC00520-202ENST00000554196 GOLGA3Q08378 1498 aa14.9□□□□□ -0.02
LINC00520-202ENST00000554196 ERICH3Q5RHP9 1530 aa14.89□□□□□ -0.03
LINC00520-202ENST00000554196 RUSC2Q8N2Y8 1516 aa14.89□□□□□ -0.03
LINC00520-202ENST00000554196 FAM9AQ8IZU1 332 aaPredicted RBP14.89□□□□□ -0.03
LINC00520-202ENST00000554196 URB2Q14146 1524 aaKnown RBP14.88□□□□□ -0.03
LINC00520-202ENST00000554196 KIF27Q86VH2 1401 aa14.88□□□□□ -0.03
LINC00520-202ENST00000554196 DNAJC5BQ9UF47 199 aa14.86□□□□□ -0.03
LINC00520-202ENST00000554196 POLA1P09884 1462 aaPredicted RBP14.86□□□□□ -0.03
LINC00520-202ENST00000554196 MRC2Q9UBG0 1479 aa14.86□□□□□ -0.03
LINC00520-202ENST00000554196 CSRNP3Q8WYN3 585 aa14.85□□□□□ -0.03
LINC00520-202ENST00000554196 ABCA10Q8WWZ4 1543 aa14.85□□□□□ -0.03
LINC00520-202ENST00000554196 LOC105371045A0A1W2PR82 267 aa14.83□□□□□ -0.04
LINC00520-202ENST00000554196 WDR62O43379 1518 aa14.82□□□□□ -0.04
LINC00520-202ENST00000554196 CUL7Q14999 1698 aa14.82□□□□□ -0.04
LINC00520-202ENST00000554196 CUX2O14529 1486 aa14.82□□□□□ -0.04
LINC00520-202ENST00000554196 ABCA5Q8WWZ7 1642 aa14.81□□□□□ -0.04
LINC00520-202ENST00000554196 THOC2Q8NI27 1593 aaKnown RBP14.8□□□□□ -0.04
LINC00520-202ENST00000554196 PRXQ9BXM0 1461 aa14.78□□□□□ -0.04
LINC00520-202ENST00000554196 TNIKQ9UKE5 1360 aa14.78□□□□□ -0.04
LINC00520-202ENST00000554196 TARBP1Q13395 1621 aaKnown RBP14.77□□□□□ -0.04
LINC00520-202ENST00000554196 PIAS4Q8N2W9 510 aaPredicted RBP14.76□□□□□ -0.05
LINC00520-202ENST00000554196 PBRM1Q86U86 1689 aa14.75□□□□□ -0.05
LINC00520-202ENST00000554196 ERCC6Q03468 1493 aa14.75□□□□□ -0.05
LINC00520-202ENST00000554196 RAPGEF2Q9Y4G8 1499 aa14.72□□□□□ -0.05
LINC00520-202ENST00000554196 RAD54L2Q9Y4B4 1467 aa14.71□□□□□ -0.05
LINC00520-202ENST00000554196 CEP162Q5TB80 1403 aa14.71□□□□□ -0.05
LINC00520-202ENST00000554196 CTTNBP2Q8WZ74 1663 aa14.69□□□□□ -0.06
LINC00520-202ENST00000554196 IFT140Q96RY7 1462 aa14.68□□□□□ -0.06
LINC00520-202ENST00000554196 GAPVD1Q14C86 1478 aa14.63□□□□□ -0.07
LINC00520-202ENST00000554196 IGF1RP08069 1367 aa14.63□□□□□ -0.07
LINC00520-202ENST00000554196 UBTFP17480 764 aaKnown RBP14.62□□□□□ -0.07
LINC00520-202ENST00000554196 EIF4G3O43432 1585 aaKnown RBP14.6□□□□□ -0.07
LINC00520-202ENST00000554196 ADAMTS12P58397 1594 aa14.6□□□□□ -0.07
LINC00520-202ENST00000554196 PPP6R1Q9UPN7 881 aa14.6□□□□□ -0.07
LINC00520-202ENST00000554196 CARMIL1Q5VZK9 1371 aa14.6□□□□□ -0.07
LINC00520-202ENST00000554196 EHMT2Q96KQ7 1210 aa14.59□□□□□ -0.07
LINC00520-202ENST00000554196 CLIP1P30622 1438 aa14.58□□□□□ -0.07
LINC00520-202ENST00000554196 ADRA2BP18089 450 aa14.58□□□□□ -0.08
LINC00520-202ENST00000554196 POTEDQ86YR6 584 aa14.58□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 11 ms