RNA–Protein interactions for RNA: ENST00000409557.5

RND3-203, Transcript of Rho family GTPase 3, humanhuman

TSL 1 (best) BASIC

Gene RND3, Length 2,372 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RND3-203ENST00000409557 NISCHQ9Y2I1 1504 aa20.66■□□□□ 0.9
RND3-203ENST00000409557 CCDC180Q9P1Z9 1646 aa17.94■□□□□ 0.46
RND3-203ENST00000409557 ZCCHC6Q5VYS8 1495 aaKnown RBP17.34■□□□□ 0.37
RND3-203ENST00000409557 DCAF8L2P0C7V8 631 aa17.3■□□□□ 0.36
RND3-203ENST00000409557 ABCC9O60706 1549 aa17.15■□□□□ 0.34
RND3-203ENST00000409557 SHROOM4Q9ULL8 1493 aa17.04■□□□□ 0.32
RND3-203ENST00000409557 DCAF1Q9Y4B6 1507 aa17■□□□□ 0.31
RND3-203ENST00000409557 MYO15BQ96JP2 1530 aa16.78■□□□□ 0.28
RND3-203ENST00000409557 NACADO15069 1562 aa16.75■□□□□ 0.27
RND3-203ENST00000409557 SCRIBQ14160 1630 aa16.64■□□□□ 0.25
RND3-203ENST00000409557 RB1CC1Q8TDY2 1594 aa16.64■□□□□ 0.25
RND3-203ENST00000409557 SUPT5HO00267 1087 aaKnown RBP16.4■□□□□ 0.22
RND3-203ENST00000409557 UNC13AQ9UPW8 1703 aa16.31■□□□□ 0.2
RND3-203ENST00000409557 PABPN1Q86U42 306 aaKnown RBP eCLIP16.23■□□□□ 0.19
RND3-203ENST00000409557 BICRAQ9NZM4 1560 aa16.13■□□□□ 0.17
RND3-203ENST00000409557 CECR2Q9BXF3 1484 aa16.11■□□□□ 0.17
RND3-203ENST00000409557 RSF1Q96T23 1441 aaPredicted RBP16.06■□□□□ 0.16
RND3-203ENST00000409557 MROH2BQ7Z745 1585 aa16■□□□□ 0.15
RND3-203ENST00000409557 BAZ1AQ9NRL2 1556 aaPredicted RBP15.95■□□□□ 0.14
RND3-203ENST00000409557 SMARCA4P51532 1647 aa15.88■□□□□ 0.13
RND3-203ENST00000409557 WIZO95785 1651 aa15.88■□□□□ 0.13
RND3-203ENST00000409557 EIF4G1Q04637 1599 aaKnown RBP15.67■□□□□ 0.1
RND3-203ENST00000409557 TOP2AP11388 1531 aaKnown RBP15.66■□□□□ 0.1
RND3-203ENST00000409557 ATAD2BQ9ULI0 1458 aa15.64■□□□□ 0.09
RND3-203ENST00000409557 PEG3Q9GZU2 1588 aa15.62■□□□□ 0.09
RND3-203ENST00000409557 SMARCA2P51531 1590 aa15.61■□□□□ 0.09
RND3-203ENST00000409557 CHIC1Q5VXU3 224 aa15.6■□□□□ 0.09
RND3-203ENST00000409557 BAZ1BQ9UIG0 1483 aaKnown RBP15.58■□□□□ 0.08
RND3-203ENST00000409557 CCDC88BA6NC98 1476 aa15.55■□□□□ 0.08
RND3-203ENST00000409557 NCAPD3P42695 1498 aa15.48■□□□□ 0.07
RND3-203ENST00000409557 CC2D2AQ9P2K1 1620 aa15.46■□□□□ 0.07
RND3-203ENST00000409557 HMGXB3Q12766 1538 aa15.43■□□□□ 0.06
RND3-203ENST00000409557 TRIM41Q8WV44 630 aa15.36■□□□□ 0.05
RND3-203ENST00000409557 ABCC8Q09428 1581 aa15.26■□□□□ 0.03
RND3-203ENST00000409557 DNAJC5BQ9UF47 199 aa15.18■□□□□ 0.02
RND3-203ENST00000409557 FAM9AQ8IZU1 332 aaPredicted RBP15.17■□□□□ 0.02
RND3-203ENST00000409557 CFTRP13569 1480 aa15.15■□□□□ 0.02
RND3-203ENST00000409557 CADPSQ9ULU8 1353 aa15.13■□□□□ 0.01
RND3-203ENST00000409557 WRNQ14191 1432 aaPredicted RBP eCLIP15.13■□□□□ 0.01
RND3-203ENST00000409557 LOC105371045A0A1W2PR82 267 aa15.08■□□□□ 0
RND3-203ENST00000409557 SYNJ1O43426 1573 aa15.05■□□□□ -0
RND3-203ENST00000409557 NESP48681 1621 aa15.05■□□□□ -0
RND3-203ENST00000409557 EHMT2Q96KQ7 1210 aa15.04■□□□□ -0
RND3-203ENST00000409557 PRDM2Q13029 1718 aa15.02□□□□□ -0.01
RND3-203ENST00000409557 SOGA1O94964 1423 aa14.97□□□□□ -0.01
RND3-203ENST00000409557 FANCD2Q9BXW9 1451 aa14.97□□□□□ -0.01
RND3-203ENST00000409557 TOP2BQ02880 1626 aa14.96□□□□□ -0.02
RND3-203ENST00000409557 CUX1P39880 1505 aa14.95□□□□□ -0.02
RND3-203ENST00000409557 LAMC3Q9Y6N6 1575 aa14.95□□□□□ -0.02
RND3-203ENST00000409557 BIVM-ERCC5R4GMW8 1640 aa14.92□□□□□ -0.02
RND3-203ENST00000409557 RUSC2Q8N2Y8 1516 aa14.91□□□□□ -0.02
RND3-203ENST00000409557 PDS5BQ9NTI5 1447 aa14.88□□□□□ -0.03
RND3-203ENST00000409557 CEP164Q9UPV0 1460 aa14.87□□□□□ -0.03
RND3-203ENST00000409557 CSRNP3Q8WYN3 585 aa14.86□□□□□ -0.03
RND3-203ENST00000409557 EEA1Q15075 1411 aa14.85□□□□□ -0.03
RND3-203ENST00000409557 KIF21AQ7Z4S6 1674 aa14.82□□□□□ -0.04
RND3-203ENST00000409557 FGD5Q6ZNL6 1462 aa14.8□□□□□ -0.04
RND3-203ENST00000409557 DNMBPQ6XZF7 1577 aa14.79□□□□□ -0.04
RND3-203ENST00000409557 TOPBP1Q92547 1522 aa14.79□□□□□ -0.04
RND3-203ENST00000409557 URB2Q14146 1524 aaKnown RBP14.77□□□□□ -0.04
RND3-203ENST00000409557 UBTFP17480 764 aaKnown RBP14.75□□□□□ -0.05
RND3-203ENST00000409557 KIF27Q86VH2 1401 aa14.74□□□□□ -0.05
RND3-203ENST00000409557 CUX2O14529 1486 aa14.73□□□□□ -0.05
RND3-203ENST00000409557 POLA1P09884 1462 aaPredicted RBP14.72□□□□□ -0.05
RND3-203ENST00000409557 RAD54L2Q9Y4B4 1467 aa14.72□□□□□ -0.05
RND3-203ENST00000409557 ERCC6Q03468 1493 aa14.72□□□□□ -0.05
RND3-203ENST00000409557 GOLGA3Q08378 1498 aa14.69□□□□□ -0.06
RND3-203ENST00000409557 MRC2Q9UBG0 1479 aa14.68□□□□□ -0.06
RND3-203ENST00000409557 RAPGEF2Q9Y4G8 1499 aa14.65□□□□□ -0.06
RND3-203ENST00000409557 KIF21BO75037 1637 aa14.65□□□□□ -0.06
RND3-203ENST00000409557 TNIKQ9UKE5 1360 aa14.64□□□□□ -0.07
RND3-203ENST00000409557 ABCA10Q8WWZ4 1543 aa14.63□□□□□ -0.07
RND3-203ENST00000409557 IGF1RP08069 1367 aa14.62□□□□□ -0.07
RND3-203ENST00000409557 RANGAP1P46060 587 aaPredicted RBP14.61□□□□□ -0.07
RND3-203ENST00000409557 TDRD9Q8NDG6 1382 aaKnown RBP14.61□□□□□ -0.07
RND3-203ENST00000409557 PRXQ9BXM0 1461 aa14.6□□□□□ -0.07
RND3-203ENST00000409557 CEP162Q5TB80 1403 aa14.59□□□□□ -0.07
RND3-203ENST00000409557 WDR62O43379 1518 aa14.57□□□□□ -0.08
RND3-203ENST00000409557 CARMIL1Q5VZK9 1371 aa14.56□□□□□ -0.08
RND3-203ENST00000409557 ERICH3Q5RHP9 1530 aa14.55□□□□□ -0.08
RND3-203ENST00000409557 WDR97A6NE52 1622 aa14.55□□□□□ -0.08
RND3-203ENST00000409557 TARBP1Q13395 1621 aaKnown RBP14.54□□□□□ -0.08
RND3-203ENST00000409557 GAPVD1Q14C86 1478 aa14.53□□□□□ -0.08
RND3-203ENST00000409557 THOC2Q8NI27 1593 aaKnown RBP14.53□□□□□ -0.08
RND3-203ENST00000409557 AQRO60306 1485 aaKnown RBP eCLIP14.5□□□□□ -0.09
RND3-203ENST00000409557 ABCA5Q8WWZ7 1642 aa14.49□□□□□ -0.09
RND3-203ENST00000409557 IFT140Q96RY7 1462 aa14.49□□□□□ -0.09
RND3-203ENST00000409557 CLIP1P30622 1438 aa14.49□□□□□ -0.09
RND3-203ENST00000409557 ZNF608Q9ULD9 1512 aaPredicted RBP14.47□□□□□ -0.09
RND3-203ENST00000409557 PPARGC1BQ86YN6 1023 aaKnown RBP14.45□□□□□ -0.1
RND3-203ENST00000409557 CUL7Q14999 1698 aa14.45□□□□□ -0.1
RND3-203ENST00000409557 AEBP2Q6ZN18 517 aaPredicted RBP14.44□□□□□ -0.1
RND3-203ENST00000409557 PBRM1Q86U86 1689 aa14.41□□□□□ -0.1
RND3-203ENST00000409557 GRIN2BQ13224 1484 aa14.4□□□□□ -0.1
RND3-203ENST00000409557 PCGF6Q9BYE7 350 aa14.39□□□□□ -0.11
RND3-203ENST00000409557 EIF4G3O43432 1585 aaKnown RBP14.38□□□□□ -0.11
RND3-203ENST00000409557 TTBK1Q5TCY1 1321 aaPredicted RBP14.37□□□□□ -0.11
RND3-203ENST00000409557 FHAD1B1AJZ9 1412 aa14.35□□□□□ -0.11
RND3-203ENST00000409557 SNAPC4Q5SXM2 1469 aa14.33□□□□□ -0.11
RND3-203ENST00000409557 P3H3Q8IVL6 736 aa14.33□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms