RNA–Protein interactions for RNA: ENST00000370500.9

GTF2B-201, Transcript of general transcription factor IIB, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GTF2B, Length 1,351 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2B-201ENST00000370500 AEBP2Q6ZN18 517 aaPredicted RBP29.55■■■□□ 2.32
GTF2B-201ENST00000370500 CHIC1Q5VXU3 224 aa28■■■□□ 2.07
GTF2B-201ENST00000370500 SENP3Q9H4L4 574 aaPredicted RBP25.37■■□□□ 1.65
GTF2B-201ENST00000370500 PHF23Q9BUL5 403 aaPredicted RBP24.95■■□□□ 1.59
GTF2B-201ENST00000370500 FOXD1Q16676 465 aa23.57■■□□□ 1.36
GTF2B-201ENST00000370500 NISCHQ9Y2I1 1504 aa22.97■■□□□ 1.27
GTF2B-201ENST00000370500 PLPPR3Q6T4P5 718 aa22.37■■□□□ 1.17
GTF2B-201ENST00000370500 MSH5O43196 834 aa22.24■■□□□ 1.15
GTF2B-201ENST00000370500 PIAS4Q8N2W9 510 aaPredicted RBP22.05■■□□□ 1.12
GTF2B-201ENST00000370500 PPP6R1Q9UPN7 881 aa21.87■■□□□ 1.09
GTF2B-201ENST00000370500 POTEDQ86YR6 584 aa21.85■■□□□ 1.09
GTF2B-201ENST00000370500 ADRA2BP18089 450 aa21.83■■□□□ 1.08
GTF2B-201ENST00000370500 CCDC180Q9P1Z9 1646 aa20.45■□□□□ 0.86
GTF2B-201ENST00000370500 SCAF1Q9H7N4 1312 aaKnown RBP20.13■□□□□ 0.81
GTF2B-201ENST00000370500 ABCC9O60706 1549 aa20.09■□□□□ 0.81
GTF2B-201ENST00000370500 MAPK8IP2Q13387 824 aaPredicted RBP20.07■□□□□ 0.8
GTF2B-201ENST00000370500 DMRT2Q9Y5R5 561 aa20.07■□□□□ 0.8
GTF2B-201ENST00000370500 PPP4R3CPQ6ZMV5 832 aa19.55■□□□□ 0.72
GTF2B-201ENST00000370500 RB1CC1Q8TDY2 1594 aa19.33■□□□□ 0.68
GTF2B-201ENST00000370500 NACADO15069 1562 aa19.31■□□□□ 0.68
GTF2B-201ENST00000370500 DCAF8L1A6NGE4 600 aa19.27■□□□□ 0.68
GTF2B-201ENST00000370500 HOXD11P31277 338 aaPredicted RBP19.26■□□□□ 0.67
GTF2B-201ENST00000370500 CNKSR2Q8WXI2 1034 aa19.25■□□□□ 0.67
GTF2B-201ENST00000370500 DCAF8L2P0C7V8 631 aa19.24■□□□□ 0.67
GTF2B-201ENST00000370500 MYO15BQ96JP2 1530 aa19.2■□□□□ 0.66
GTF2B-201ENST00000370500 CACNB1Q02641 598 aaPredicted RBP19.14■□□□□ 0.65
GTF2B-201ENST00000370500 RNF216Q9NWF9 866 aaPredicted RBP19.11■□□□□ 0.65
GTF2B-201ENST00000370500 ZCCHC6Q5VYS8 1495 aaKnown RBP19.09■□□□□ 0.65
GTF2B-201ENST00000370500 DCAF1Q9Y4B6 1507 aa19.06■□□□□ 0.64
GTF2B-201ENST00000370500 RNF39Q9H2S5 420 aa18.89■□□□□ 0.61
GTF2B-201ENST00000370500 NCBP3Q53F19 620 aaKnown RBP18.84■□□□□ 0.61
GTF2B-201ENST00000370500 PABPN1Q86U42 306 aaKnown RBP eCLIP18.78■□□□□ 0.6
GTF2B-201ENST00000370500 UNC13AQ9UPW8 1703 aa18.76■□□□□ 0.59
GTF2B-201ENST00000370500 DNAJC5BQ9UF47 199 aa18.69■□□□□ 0.58
GTF2B-201ENST00000370500 BICRAQ9NZM4 1560 aa18.69■□□□□ 0.58
GTF2B-201ENST00000370500 C1QBPQ07021 282 aaKnown RBP18.66■□□□□ 0.58
GTF2B-201ENST00000370500 SHROOM4Q9ULL8 1493 aa18.62■□□□□ 0.57
GTF2B-201ENST00000370500 SCRIBQ14160 1630 aa18.58■□□□□ 0.57
GTF2B-201ENST00000370500 NPM3O75607 178 aaKnown RBP18.45■□□□□ 0.54
GTF2B-201ENST00000370500 GRWD1Q9BQ67 446 aaKnown RBP eCLIP18.4■□□□□ 0.54
GTF2B-201ENST00000370500 EIF4G1Q04637 1599 aaKnown RBP18.23■□□□□ 0.51
GTF2B-201ENST00000370500 CC2D2AQ9P2K1 1620 aa18.17■□□□□ 0.5
GTF2B-201ENST00000370500 CECR2Q9BXF3 1484 aa18.11■□□□□ 0.49
GTF2B-201ENST00000370500 KCNA4P22459 653 aa17.94■□□□□ 0.46
GTF2B-201ENST00000370500 U3KPZ7 1027 aaPredicted RBP17.92■□□□□ 0.46
GTF2B-201ENST00000370500 NCAPD3P42695 1498 aa17.84■□□□□ 0.45
GTF2B-201ENST00000370500 BAZ1AQ9NRL2 1556 aaPredicted RBP17.82■□□□□ 0.44
GTF2B-201ENST00000370500 SMARCA4P51532 1647 aa17.8■□□□□ 0.44
GTF2B-201ENST00000370500 ATAD2BQ9ULI0 1458 aa17.79■□□□□ 0.44
GTF2B-201ENST00000370500 SMARCA2P51531 1590 aa17.78■□□□□ 0.44
GTF2B-201ENST00000370500 CAPN15O75808 1086 aa17.74■□□□□ 0.43
GTF2B-201ENST00000370500 HMGXB3Q12766 1538 aa17.7■□□□□ 0.42
GTF2B-201ENST00000370500 PEG3Q9GZU2 1588 aa17.69■□□□□ 0.42
GTF2B-201ENST00000370500 SPINK5Q9NQ38 1064 aaPredicted RBP17.68■□□□□ 0.42
GTF2B-201ENST00000370500 MROH2BQ7Z745 1585 aa17.66■□□□□ 0.42
GTF2B-201ENST00000370500 SLC4A2P04920 1241 aa17.63■□□□□ 0.41
GTF2B-201ENST00000370500 DSG3P32926 999 aa17.63■□□□□ 0.41
GTF2B-201ENST00000370500 BAZ1BQ9UIG0 1483 aaKnown RBP17.63■□□□□ 0.41
GTF2B-201ENST00000370500 APLP2Q06481 763 aa17.59■□□□□ 0.41
GTF2B-201ENST00000370500 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.51■□□□□ 0.39
GTF2B-201ENST00000370500 HNRNPUL2Q1KMD3 747 aaKnown RBP17.51■□□□□ 0.39
GTF2B-201ENST00000370500 RSF1Q96T23 1441 aaPredicted RBP17.46■□□□□ 0.39
GTF2B-201ENST00000370500 ZNF219Q9P2Y4 722 aaPredicted RBP17.42■□□□□ 0.38
GTF2B-201ENST00000370500 WIZO95785 1651 aa17.42■□□□□ 0.38
GTF2B-201ENST00000370500 TRHP20396 242 aaPredicted RBP17.4■□□□□ 0.38
GTF2B-201ENST00000370500 ERCC6Q03468 1493 aa17.37■□□□□ 0.37
GTF2B-201ENST00000370500 SAMD1Q6SPF0 538 aaPredicted RBP17.36■□□□□ 0.37
GTF2B-201ENST00000370500 LAMC3Q9Y6N6 1575 aa17.35■□□□□ 0.37
GTF2B-201ENST00000370500 NESP48681 1621 aa17.33■□□□□ 0.36
GTF2B-201ENST00000370500 CADPSQ9ULU8 1353 aa17.31■□□□□ 0.36
GTF2B-201ENST00000370500 TOP2AP11388 1531 aaKnown RBP17.29■□□□□ 0.36
GTF2B-201ENST00000370500 PDS5BQ9NTI5 1447 aa17.28■□□□□ 0.36
GTF2B-201ENST00000370500 ABCB7O75027 752 aa17.27■□□□□ 0.35
GTF2B-201ENST00000370500 CUX2O14529 1486 aa17.27■□□□□ 0.35
GTF2B-201ENST00000370500 CFTRP13569 1480 aa17.16■□□□□ 0.34
GTF2B-201ENST00000370500 MYCNP04198 464 aaPredicted RBP17.15■□□□□ 0.34
GTF2B-201ENST00000370500 POTEHQ6S545 545 aa17.13■□□□□ 0.33
GTF2B-201ENST00000370500 CCDC88BA6NC98 1476 aa17.1■□□□□ 0.33
GTF2B-201ENST00000370500 THOC2Q8NI27 1593 aaKnown RBP17.09■□□□□ 0.33
GTF2B-201ENST00000370500 KIF21AQ7Z4S6 1674 aa17.09■□□□□ 0.33
GTF2B-201ENST00000370500 FANCD2Q9BXW9 1451 aa17.06■□□□□ 0.32
GTF2B-201ENST00000370500 MRC2Q9UBG0 1479 aa17.06■□□□□ 0.32
GTF2B-201ENST00000370500 CEP164Q9UPV0 1460 aa17.06■□□□□ 0.32
GTF2B-201ENST00000370500 WDR62O43379 1518 aa16.99■□□□□ 0.31
GTF2B-201ENST00000370500 SLC4A1APQ9BWU0 796 aaKnown RBP16.98■□□□□ 0.31
GTF2B-201ENST00000370500 RBM42Q9BTD8 480 aaKnown RBP16.93■□□□□ 0.3
GTF2B-201ENST00000370500 PRDM2Q13029 1718 aa16.92■□□□□ 0.3
GTF2B-201ENST00000370500 SUPT5HO00267 1087 aaKnown RBP16.9■□□□□ 0.3
GTF2B-201ENST00000370500 DNAJC5Q9H3Z4 198 aa16.9■□□□□ 0.3
GTF2B-201ENST00000370500 POLA2Q14181 598 aa16.89■□□□□ 0.3
GTF2B-201ENST00000370500 FOXD4L1Q9NU39 408 aa16.87■□□□□ 0.29
GTF2B-201ENST00000370500 URB2Q14146 1524 aaKnown RBP16.86■□□□□ 0.29
GTF2B-201ENST00000370500 ABCC8Q09428 1581 aa16.85■□□□□ 0.29
GTF2B-201ENST00000370500 TOPBP1Q92547 1522 aa16.76■□□□□ 0.27
GTF2B-201ENST00000370500 DNMBPQ6XZF7 1577 aa16.73■□□□□ 0.27
GTF2B-201ENST00000370500 IFT140Q96RY7 1462 aa16.73■□□□□ 0.27
GTF2B-201ENST00000370500 ZBTB12Q9Y330 459 aaPredicted RBP16.65■□□□□ 0.26
GTF2B-201ENST00000370500 ATF5Q9Y2D1 282 aaPredicted RBP16.63■□□□□ 0.25
GTF2B-201ENST00000370500 POLA1P09884 1462 aaPredicted RBP16.61■□□□□ 0.25
GTF2B-201ENST00000370500 SOGA1O94964 1423 aa16.59■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms