RNA–Protein interactions for RNA: ENST00000539896.1

PTAFR-203, Transcript of platelet activating factor receptor, humanhuman

APPRIS P1 TSL 2 BASIC

Gene PTAFR, Length 4,191 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTAFR-203ENST00000539896 NISCHQ9Y2I1 1504 aa17.11■□□□□ 0.33
PTAFR-203ENST00000539896 DCAF8L2P0C7V8 631 aa16.76■□□□□ 0.27
PTAFR-203ENST00000539896 SUPT5HO00267 1087 aaKnown RBP16.5■□□□□ 0.23
PTAFR-203ENST00000539896 SHROOM4Q9ULL8 1493 aa16.26■□□□□ 0.19
PTAFR-203ENST00000539896 PCGF6Q9BYE7 350 aa15.76■□□□□ 0.11
PTAFR-203ENST00000539896 EHMT2Q96KQ7 1210 aa15.73■□□□□ 0.11
PTAFR-203ENST00000539896 FAM9AQ8IZU1 332 aaPredicted RBP15.49■□□□□ 0.07
PTAFR-203ENST00000539896 ZEB1P37275 1124 aaPredicted RBP15.3■□□□□ 0.04
PTAFR-203ENST00000539896 HRCP23327 699 aa15.28■□□□□ 0.04
PTAFR-203ENST00000539896 TTBK1Q5TCY1 1321 aaPredicted RBP15.25■□□□□ 0.03
PTAFR-203ENST00000539896 TRIM41Q8WV44 630 aa15.24■□□□□ 0.03
PTAFR-203ENST00000539896 PELP1Q8IZL8 1130 aaKnown RBP15.21■□□□□ 0.03
PTAFR-203ENST00000539896 APLP2Q06481 763 aa15.18■□□□□ 0.02
PTAFR-203ENST00000539896 CCER1Q8TC90 406 aaPredicted RBP15.15■□□□□ 0.02
PTAFR-203ENST00000539896 CENPBP07199 599 aaPredicted RBP15.14■□□□□ 0.01
PTAFR-203ENST00000539896 CHIC1Q5VXU3 224 aa15.14■□□□□ 0.01
PTAFR-203ENST00000539896 TRIM26Q12899 539 aaPredicted RBP15.09■□□□□ 0.01
PTAFR-203ENST00000539896 LOC105371045A0A1W2PR82 267 aa15.05■□□□□ -0
PTAFR-203ENST00000539896 PPARGC1BQ86YN6 1023 aaKnown RBP15.01□□□□□ -0.01
PTAFR-203ENST00000539896 CCDC180Q9P1Z9 1646 aa14.93□□□□□ -0.02
PTAFR-203ENST00000539896 RANGAP1P46060 587 aaPredicted RBP14.89□□□□□ -0.03
PTAFR-203ENST00000539896 UBTFP17480 764 aaKnown RBP14.88□□□□□ -0.03
PTAFR-203ENST00000539896 YTHDC1Q96MU7 727 aaKnown RBP14.86□□□□□ -0.03
PTAFR-203ENST00000539896 MYT1Q01538 1121 aa14.73□□□□□ -0.05
PTAFR-203ENST00000539896 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP14.63□□□□□ -0.07
PTAFR-203ENST00000539896 ERICH6Q7L0X2 663 aa14.59□□□□□ -0.07
PTAFR-203ENST00000539896 ATP1B4Q9UN42 357 aaPredicted RBP14.58□□□□□ -0.08
PTAFR-203ENST00000539896 NEFLP07196 543 aa14.55□□□□□ -0.08
PTAFR-203ENST00000539896 DIEXFQ68CQ4 756 aaKnown RBP14.55□□□□□ -0.08
PTAFR-203ENST00000539896 HNRNPUL2Q1KMD3 747 aaKnown RBP14.54□□□□□ -0.08
PTAFR-203ENST00000539896 ZCCHC6Q5VYS8 1495 aaKnown RBP14.45□□□□□ -0.1
PTAFR-203ENST00000539896 ITGAEP38570 1179 aa14.42□□□□□ -0.1
PTAFR-203ENST00000539896 GTF3C3Q9Y5Q9 886 aa14.4□□□□□ -0.1
PTAFR-203ENST00000539896 ACIN1Q9UKV3 1341 aaKnown RBP14.28□□□□□ -0.12
PTAFR-203ENST00000539896 DCAF1Q9Y4B6 1507 aa14.27□□□□□ -0.12
PTAFR-203ENST00000539896 ZNF316A6NFI3 1004 aaPredicted RBP14.22□□□□□ -0.13
PTAFR-203ENST00000539896 MYO15BQ96JP2 1530 aa14.17□□□□□ -0.14
PTAFR-203ENST00000539896 POLR3GLQ9BT43 218 aa14.08□□□□□ -0.16
PTAFR-203ENST00000539896 SCAF1Q9H7N4 1312 aaKnown RBP14.08□□□□□ -0.16
PTAFR-203ENST00000539896 BCANQ96GW7 911 aa14.08□□□□□ -0.16
PTAFR-203ENST00000539896 CSRNP3Q8WYN3 585 aa14.07□□□□□ -0.16
PTAFR-203ENST00000539896 ABCC9O60706 1549 aa14.07□□□□□ -0.16
PTAFR-203ENST00000539896 NEUROD1Q13562 356 aa14.06□□□□□ -0.16
PTAFR-203ENST00000539896 CNGB1Q14028 1251 aaPredicted RBP14.05□□□□□ -0.16
PTAFR-203ENST00000539896 FAM50AQ14320 339 aaKnown RBP14.03□□□□□ -0.16
PTAFR-203ENST00000539896 PABPN1Q86U42 306 aaKnown RBP eCLIP14.01□□□□□ -0.17
PTAFR-203ENST00000539896 ANP32CO43423 234 aa13.92□□□□□ -0.18
PTAFR-203ENST00000539896 DAXXQ9UER7 740 aaPredicted RBP13.9□□□□□ -0.18
PTAFR-203ENST00000539896 TRIM52Q96A61 297 aa13.85□□□□□ -0.19
PTAFR-203ENST00000539896 SCRIBQ14160 1630 aa13.84□□□□□ -0.19
PTAFR-203ENST00000539896 RTL5Q5HYW3 569 aaPredicted RBP13.84□□□□□ -0.19
PTAFR-203ENST00000539896 MIER1Q8N108 512 aa13.83□□□□□ -0.2
PTAFR-203ENST00000539896 CDK11AQ9UQ88 783 aaPredicted RBP13.83□□□□□ -0.2
PTAFR-203ENST00000539896 NACADO15069 1562 aa13.79□□□□□ -0.2
PTAFR-203ENST00000539896 CLSPNQ9HAW4 1339 aa13.79□□□□□ -0.2
PTAFR-203ENST00000539896 FKBP8Q14318 412 aa13.77□□□□□ -0.2
PTAFR-203ENST00000539896 RSF1Q96T23 1441 aaPredicted RBP13.76□□□□□ -0.21
PTAFR-203ENST00000539896 P3H3Q8IVL6 736 aa13.75□□□□□ -0.21
PTAFR-203ENST00000539896 DDX10Q13206 875 aaKnown RBP13.73□□□□□ -0.21
PTAFR-203ENST00000539896 ZNF326Q5BKZ1 582 aaKnown RBP13.69□□□□□ -0.22
PTAFR-203ENST00000539896 MYT1LQ9UL68 1186 aa13.66□□□□□ -0.22
PTAFR-203ENST00000539896 CEP162Q5TB80 1403 aa13.64□□□□□ -0.23
PTAFR-203ENST00000539896 HNRNPUQ00839 825 aaKnown RBP eCLIP13.63□□□□□ -0.23
PTAFR-203ENST00000539896 CLIP1P30622 1438 aa13.62□□□□□ -0.23
PTAFR-203ENST00000539896 TONSLQ96HA7 1378 aa13.61□□□□□ -0.23
PTAFR-203ENST00000539896 RB1CC1Q8TDY2 1594 aa13.6□□□□□ -0.23
PTAFR-203ENST00000539896 ARID3CA6NKF2 412 aa13.55□□□□□ -0.24
PTAFR-203ENST00000539896 SLC4A1APQ9BWU0 796 aaKnown RBP13.55□□□□□ -0.24
PTAFR-203ENST00000539896 ANP32AP39687 249 aaKnown RBP13.55□□□□□ -0.24
PTAFR-203ENST00000539896 HIRIP3Q9BW71 556 aaPredicted RBP13.55□□□□□ -0.24
PTAFR-203ENST00000539896 EEA1Q15075 1411 aa13.54□□□□□ -0.24
PTAFR-203ENST00000539896 TNIKQ9UKE5 1360 aa13.54□□□□□ -0.24
PTAFR-203ENST00000539896 FAM9BQ8IZU0 186 aa13.53□□□□□ -0.24
PTAFR-203ENST00000539896 GOLGA3Q08378 1498 aa13.52□□□□□ -0.25
PTAFR-203ENST00000539896 NPM2Q86SE8 214 aaKnown RBP13.48□□□□□ -0.25
PTAFR-203ENST00000539896 IRX6P78412 446 aaPredicted RBP13.47□□□□□ -0.25
PTAFR-203ENST00000539896 CHIC2Q9UKJ5 165 aa13.43□□□□□ -0.26
PTAFR-203ENST00000539896 WRNQ14191 1432 aaPredicted RBP eCLIP13.43□□□□□ -0.26
PTAFR-203ENST00000539896 MRS2Q9HD23 443 aa13.42□□□□□ -0.26
PTAFR-203ENST00000539896 ANP32EQ9BTT0 268 aa13.42□□□□□ -0.26
PTAFR-203ENST00000539896 ZNF777Q9ULD5 760 aaPredicted RBP13.42□□□□□ -0.26
PTAFR-203ENST00000539896 SUPT16HQ9Y5B9 1047 aaKnown RBP13.42□□□□□ -0.26
PTAFR-203ENST00000539896 CECR2Q9BXF3 1484 aa13.41□□□□□ -0.26
PTAFR-203ENST00000539896 CCDC136Q96JN2 1154 aa13.4□□□□□ -0.26
PTAFR-203ENST00000539896 FBLN2P98095 1184 aa13.39□□□□□ -0.27
PTAFR-203ENST00000539896 NBR1Q14596 966 aa13.38□□□□□ -0.27
PTAFR-203ENST00000539896 CEP164Q9UPV0 1460 aa13.38□□□□□ -0.27
PTAFR-203ENST00000539896 SALL2Q9Y467 1007 aaPredicted RBP13.37□□□□□ -0.27
PTAFR-203ENST00000539896 SOGA1O94964 1423 aa13.37□□□□□ -0.27
PTAFR-203ENST00000539896 TMC1Q8TDI8 760 aa13.35□□□□□ -0.27
PTAFR-203ENST00000539896 MTUS2Q5JR59 1369 aa13.35□□□□□ -0.27
PTAFR-203ENST00000539896 CANXP27824 592 aaKnown RBP13.34□□□□□ -0.27
PTAFR-203ENST00000539896 ZBTB47Q9UFB7 747 aaPredicted RBP13.34□□□□□ -0.27
PTAFR-203ENST00000539896 EIF4G2P78344 907 aaKnown RBP eCLIP13.34□□□□□ -0.27
PTAFR-203ENST00000539896 SIN3AQ96ST3 1273 aa13.34□□□□□ -0.27
PTAFR-203ENST00000539896 RRP7BPQ9NSQ0 103 aa13.3□□□□□ -0.28
PTAFR-203ENST00000539896 BAZ1AQ9NRL2 1556 aaPredicted RBP13.27□□□□□ -0.29
PTAFR-203ENST00000539896 EIF5BO60841 1220 aaKnown RBP13.25□□□□□ -0.29
PTAFR-203ENST00000539896 MROH2BQ7Z745 1585 aa13.25□□□□□ -0.29
PTAFR-203ENST00000539896 CCNB3Q8WWL7 1395 aa13.24□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 110.6 ms