RNA–Protein interactions for RNA: ENST00000324537.5

SH3GL3-201, Transcript of SH3 domain containing GRB2 like 3, endophilin A3, humanhuman

TSL 2 BASIC

Gene SH3GL3, Length 2,012 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3GL3-201ENST00000324537 NISCHQ9Y2I1 1504 aa18.33■□□□□ 0.52
SH3GL3-201ENST00000324537 CCDC180Q9P1Z9 1646 aa16.14■□□□□ 0.18
SH3GL3-201ENST00000324537 ABCC9O60706 1549 aa15.71■□□□□ 0.11
SH3GL3-201ENST00000324537 SHROOM4Q9ULL8 1493 aa15.66■□□□□ 0.1
SH3GL3-201ENST00000324537 ZCCHC6Q5VYS8 1495 aaKnown RBP15.58■□□□□ 0.08
SH3GL3-201ENST00000324537 SUPT5HO00267 1087 aaKnown RBP15.56■□□□□ 0.08
SH3GL3-201ENST00000324537 HRCP23327 699 aa15.52■□□□□ 0.08
SH3GL3-201ENST00000324537 CHIC1Q5VXU3 224 aa15.38■□□□□ 0.05
SH3GL3-201ENST00000324537 MYO15BQ96JP2 1530 aa15.33■□□□□ 0.04
SH3GL3-201ENST00000324537 DCAF1Q9Y4B6 1507 aa15.21■□□□□ 0.03
SH3GL3-201ENST00000324537 PCGF6Q9BYE7 350 aa15.18■□□□□ 0.02
SH3GL3-201ENST00000324537 DCAF8L2P0C7V8 631 aa15.17■□□□□ 0.02
SH3GL3-201ENST00000324537 RB1CC1Q8TDY2 1594 aa15.14■□□□□ 0.01
SH3GL3-201ENST00000324537 NACADO15069 1562 aa15.13■□□□□ 0.01
SH3GL3-201ENST00000324537 TRIM26Q12899 539 aaPredicted RBP14.95□□□□□ -0.02
SH3GL3-201ENST00000324537 PPARGC1BQ86YN6 1023 aaKnown RBP14.95□□□□□ -0.02
SH3GL3-201ENST00000324537 ZEB1P37275 1124 aaPredicted RBP14.89□□□□□ -0.03
SH3GL3-201ENST00000324537 LOC105371045A0A1W2PR82 267 aa14.83□□□□□ -0.03
SH3GL3-201ENST00000324537 PELP1Q8IZL8 1130 aaKnown RBP14.83□□□□□ -0.04
SH3GL3-201ENST00000324537 UNC13AQ9UPW8 1703 aa14.83□□□□□ -0.04
SH3GL3-201ENST00000324537 SCRIBQ14160 1630 aa14.78□□□□□ -0.04
SH3GL3-201ENST00000324537 PABPN1Q86U42 306 aaKnown RBP eCLIP14.67□□□□□ -0.06
SH3GL3-201ENST00000324537 BICRAQ9NZM4 1560 aa14.66□□□□□ -0.06
SH3GL3-201ENST00000324537 RSF1Q96T23 1441 aaPredicted RBP14.6□□□□□ -0.07
SH3GL3-201ENST00000324537 TRIM41Q8WV44 630 aa14.57□□□□□ -0.08
SH3GL3-201ENST00000324537 SCAF1Q9H7N4 1312 aaKnown RBP14.43□□□□□ -0.1
SH3GL3-201ENST00000324537 FAM9AQ8IZU1 332 aaPredicted RBP14.32□□□□□ -0.12
SH3GL3-201ENST00000324537 EIF4G1Q04637 1599 aaKnown RBP14.29□□□□□ -0.12
SH3GL3-201ENST00000324537 ACIN1Q9UKV3 1341 aaKnown RBP14.27□□□□□ -0.13
SH3GL3-201ENST00000324537 MYT1Q01538 1121 aa14.27□□□□□ -0.13
SH3GL3-201ENST00000324537 DNAJC5BQ9UF47 199 aa14.26□□□□□ -0.13
SH3GL3-201ENST00000324537 CENPBP07199 599 aaPredicted RBP14.21□□□□□ -0.13
SH3GL3-201ENST00000324537 CCER1Q8TC90 406 aaPredicted RBP14.21□□□□□ -0.13
SH3GL3-201ENST00000324537 CC2D2AQ9P2K1 1620 aa14.21□□□□□ -0.13
SH3GL3-201ENST00000324537 MROH2BQ7Z745 1585 aa14.2□□□□□ -0.14
SH3GL3-201ENST00000324537 WRNQ14191 1432 aaPredicted RBP eCLIP14.19□□□□□ -0.14
SH3GL3-201ENST00000324537 CECR2Q9BXF3 1484 aa14.18□□□□□ -0.14
SH3GL3-201ENST00000324537 BAZ1AQ9NRL2 1556 aaPredicted RBP14.16□□□□□ -0.14
SH3GL3-201ENST00000324537 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP14.14□□□□□ -0.15
SH3GL3-201ENST00000324537 NEUROD1Q13562 356 aa14.14□□□□□ -0.15
SH3GL3-201ENST00000324537 DIEXFQ68CQ4 756 aaKnown RBP14.14□□□□□ -0.15
SH3GL3-201ENST00000324537 WIZO95785 1651 aa14.12□□□□□ -0.15
SH3GL3-201ENST00000324537 SMARCA4P51532 1647 aa14.11□□□□□ -0.15
SH3GL3-201ENST00000324537 EHMT2Q96KQ7 1210 aa14.09□□□□□ -0.15
SH3GL3-201ENST00000324537 GTF3C3Q9Y5Q9 886 aa14.05□□□□□ -0.16
SH3GL3-201ENST00000324537 EEA1Q15075 1411 aa14.04□□□□□ -0.16
SH3GL3-201ENST00000324537 TNIKQ9UKE5 1360 aa14.04□□□□□ -0.16
SH3GL3-201ENST00000324537 CEP162Q5TB80 1403 aa14.01□□□□□ -0.17
SH3GL3-201ENST00000324537 TOP2AP11388 1531 aaKnown RBP14□□□□□ -0.17
SH3GL3-201ENST00000324537 SMARCA2P51531 1590 aa13.99□□□□□ -0.17
SH3GL3-201ENST00000324537 ZNF316A6NFI3 1004 aaPredicted RBP13.98□□□□□ -0.17
SH3GL3-201ENST00000324537 ATAD2BQ9ULI0 1458 aa13.98□□□□□ -0.17
SH3GL3-201ENST00000324537 CCDC88BA6NC98 1476 aa13.94□□□□□ -0.18
SH3GL3-201ENST00000324537 PEG3Q9GZU2 1588 aa13.94□□□□□ -0.18
SH3GL3-201ENST00000324537 NCAPD3P42695 1498 aa13.93□□□□□ -0.18
SH3GL3-201ENST00000324537 HMGXB3Q12766 1538 aa13.91□□□□□ -0.18
SH3GL3-201ENST00000324537 BAZ1BQ9UIG0 1483 aaKnown RBP13.9□□□□□ -0.18
SH3GL3-201ENST00000324537 ABCC8Q09428 1581 aa13.9□□□□□ -0.18
SH3GL3-201ENST00000324537 CSRNP3Q8WYN3 585 aa13.89□□□□□ -0.19
SH3GL3-201ENST00000324537 GOLGA3Q08378 1498 aa13.88□□□□□ -0.19
SH3GL3-201ENST00000324537 SOGA1O94964 1423 aa13.86□□□□□ -0.19
SH3GL3-201ENST00000324537 UBTFP17480 764 aaKnown RBP13.81□□□□□ -0.2
SH3GL3-201ENST00000324537 CLSPNQ9HAW4 1339 aa13.79□□□□□ -0.2
SH3GL3-201ENST00000324537 CEP164Q9UPV0 1460 aa13.78□□□□□ -0.2
SH3GL3-201ENST00000324537 KIF21BO75037 1637 aa13.77□□□□□ -0.21
SH3GL3-201ENST00000324537 TTBK1Q5TCY1 1321 aaPredicted RBP13.76□□□□□ -0.21
SH3GL3-201ENST00000324537 RUSC2Q8N2Y8 1516 aa13.73□□□□□ -0.21
SH3GL3-201ENST00000324537 MIER1Q8N108 512 aa13.73□□□□□ -0.21
SH3GL3-201ENST00000324537 VPS8Q8N3P4 1428 aa13.71□□□□□ -0.22
SH3GL3-201ENST00000324537 CLIP1P30622 1438 aa13.7□□□□□ -0.22
SH3GL3-201ENST00000324537 YTHDC1Q96MU7 727 aaKnown RBP13.69□□□□□ -0.22
SH3GL3-201ENST00000324537 APLP2Q06481 763 aa13.66□□□□□ -0.22
SH3GL3-201ENST00000324537 HNRNPUL2Q1KMD3 747 aaKnown RBP13.65□□□□□ -0.22
SH3GL3-201ENST00000324537 NESP48681 1621 aa13.62□□□□□ -0.23
SH3GL3-201ENST00000324537 SYNJ1O43426 1573 aa13.59□□□□□ -0.23
SH3GL3-201ENST00000324537 AEBP2Q6ZN18 517 aaPredicted RBP13.59□□□□□ -0.23
SH3GL3-201ENST00000324537 LAMC3Q9Y6N6 1575 aa13.59□□□□□ -0.23
SH3GL3-201ENST00000324537 ERCC6Q03468 1493 aa13.55□□□□□ -0.24
SH3GL3-201ENST00000324537 CADPSQ9ULU8 1353 aa13.54□□□□□ -0.24
SH3GL3-201ENST00000324537 DHX57Q6P158 1386 aaKnown RBP13.53□□□□□ -0.24
SH3GL3-201ENST00000324537 RAPGEF2Q9Y4G8 1499 aa13.52□□□□□ -0.24
SH3GL3-201ENST00000324537 ERICH3Q5RHP9 1530 aa13.51□□□□□ -0.25
SH3GL3-201ENST00000324537 CFTRP13569 1480 aa13.49□□□□□ -0.25
SH3GL3-201ENST00000324537 KIF21AQ7Z4S6 1674 aa13.49□□□□□ -0.25
SH3GL3-201ENST00000324537 SUPT16HQ9Y5B9 1047 aaKnown RBP13.48□□□□□ -0.25
SH3GL3-201ENST00000324537 PDS5BQ9NTI5 1447 aa13.48□□□□□ -0.25
SH3GL3-201ENST00000324537 TOP2BQ02880 1626 aa13.47□□□□□ -0.25
SH3GL3-201ENST00000324537 CUX2O14529 1486 aa13.47□□□□□ -0.25
SH3GL3-201ENST00000324537 PRDM2Q13029 1718 aa13.46□□□□□ -0.25
SH3GL3-201ENST00000324537 RRBP1Q9P2E9 1410 aaKnown RBP13.46□□□□□ -0.25
SH3GL3-201ENST00000324537 PRXQ9BXM0 1461 aa13.43□□□□□ -0.26
SH3GL3-201ENST00000324537 BIVM-ERCC5R4GMW8 1640 aa13.42□□□□□ -0.26
SH3GL3-201ENST00000324537 FANCD2Q9BXW9 1451 aa13.42□□□□□ -0.26
SH3GL3-201ENST00000324537 ARAP1Q96P48 1450 aa13.42□□□□□ -0.26
SH3GL3-201ENST00000324537 THOC2Q8NI27 1593 aaKnown RBP13.4□□□□□ -0.26
SH3GL3-201ENST00000324537 CCNB3Q8WWL7 1395 aa13.35□□□□□ -0.27
SH3GL3-201ENST00000324537 MRC2Q9UBG0 1479 aa13.35□□□□□ -0.27
SH3GL3-201ENST00000324537 TSHZ2Q9NRE2 1034 aa13.35□□□□□ -0.27
SH3GL3-201ENST00000324537 ANP32EQ9BTT0 268 aa13.33□□□□□ -0.28
SH3GL3-201ENST00000324537 KANK4Q5T7N3 995 aaPredicted RBP13.32□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms