Protein–RNA interactions for Protein: Q9UND3

NPIPA1, Nuclear pore complex-interacting protein family member A1, humanhuman

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA1Q9UND3 ALKBH6-212ENST00000485128 959 ntTSL 5 BASIC19.01■□□□□ 0.63
NPIPA1Q9UND3 RNA5SP413-201ENST00000516373 109 ntBASIC19.01■□□□□ 0.63
NPIPA1Q9UND3 TPT1-AS1-210ENST00000520590 873 ntTSL 5 BASIC19.01■□□□□ 0.63
NPIPA1Q9UND3 AP2S1-207ENST00000599990 829 ntAPPRIS ALT1 TSL 2 BASIC19.01■□□□□ 0.63
NPIPA1Q9UND3 AL591742.1-201ENST00000604433 565 ntBASIC19.01■□□□□ 0.63
NPIPA1Q9UND3 APOC3-205ENST00000630701 541 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
NPIPA1Q9UND3 UBXN2B-206ENST00000638450 591 ntTSL 5 BASIC19.01■□□□□ 0.63
NPIPA1Q9UND3 LOXL1-AS1-210ENST00000567257 2358 ntTSL 2 BASIC19.01■□□□□ 0.63
NPIPA1Q9UND3 TMEM175-212ENST00000508204 1399 ntTSL 3 BASIC19.01■□□□□ 0.63
NPIPA1Q9UND3 SNX7-201ENST00000306121 1734 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
NPIPA1Q9UND3 PAQR6-212ENST00000540423 1729 ntTSL 3 BASIC19■□□□□ 0.63
NPIPA1Q9UND3 DTWD2-203ENST00000510708 2307 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
NPIPA1Q9UND3 RARRES2-201ENST00000223271 740 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
NPIPA1Q9UND3 PPP1CA-202ENST00000358239 1054 ntTSL 2 BASIC19■□□□□ 0.63
NPIPA1Q9UND3 IPO13-201ENST00000372339 1201 ntTSL 2 BASIC19■□□□□ 0.63
NPIPA1Q9UND3 NAT16-202ENST00000443096 1286 ntTSL 1 (best) BASIC19■□□□□ 0.63
NPIPA1Q9UND3 LINC01637-201ENST00000444039 684 ntTSL 2 BASIC19■□□□□ 0.63
NPIPA1Q9UND3 CDH18-AS1-201ENST00000513573 424 ntTSL 2 BASIC19■□□□□ 0.63
NPIPA1Q9UND3 AP000785.1-201ENST00000527314 613 ntTSL 4 BASIC19■□□□□ 0.63
NPIPA1Q9UND3 PTGER2-202ENST00000557436 643 ntTSL 3 BASIC19■□□□□ 0.63
NPIPA1Q9UND3 ETHE1-205ENST00000600651 1052 ntTSL 1 (best) BASIC19■□□□□ 0.63
NPIPA1Q9UND3 AC093762.2-201ENST00000641700 291 ntAPPRIS P1 BASIC19■□□□□ 0.63
NPIPA1Q9UND3 CCDC189-206ENST00000543610 1967 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
NPIPA1Q9UND3 TANGO2-212ENST00000434570 2180 ntTSL 2 BASIC19■□□□□ 0.63
NPIPA1Q9UND3 C19orf12-201ENST00000323670 2464 ntAPPRIS P1 TSL 2 BASIC19■□□□□ 0.63
NPIPA1Q9UND3 BAALC-205ENST00000438105 2662 ntTSL 1 (best) BASIC19■□□□□ 0.63
NPIPA1Q9UND3 DPYS-201ENST00000351513 2127 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
NPIPA1Q9UND3 PUF60-203ENST00000453551 1842 ntTSL 1 (best) BASIC19■□□□□ 0.63
NPIPA1Q9UND3 CASP16P-201ENST00000428155 1433 ntTSL 1 (best) BASIC19■□□□□ 0.63
NPIPA1Q9UND3 ZBTB42-202ENST00000555360 1411 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
NPIPA1Q9UND3 MMP23B-201ENST00000356026 1326 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
NPIPA1Q9UND3 TMEM176B-203ENST00000434545 1303 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
NPIPA1Q9UND3 AC026310.3-201ENST00000625186 2373 ntBASIC18.99■□□□□ 0.63
NPIPA1Q9UND3 GCH1-202ENST00000395514 1977 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
NPIPA1Q9UND3 RHOBTB3-201ENST00000379982 5537 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
NPIPA1Q9UND3 UNC119-201ENST00000301032 1653 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
NPIPA1Q9UND3 FMR1-204ENST00000370471 4125 ntTSL 5 BASIC18.99■□□□□ 0.63
NPIPA1Q9UND3 AC009126.1-201ENST00000501338 2245 ntTSL 2 BASIC18.99■□□□□ 0.63
NPIPA1Q9UND3 SDHC-201ENST00000342751 1127 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
NPIPA1Q9UND3 AL121761.1-202ENST00000412571 415 ntTSL 2 BASIC18.99■□□□□ 0.63
NPIPA1Q9UND3 EIF4E3-203ENST00000421769 777 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
NPIPA1Q9UND3 AC025754.1-201ENST00000507566 407 ntTSL 3 BASIC18.99■□□□□ 0.63
NPIPA1Q9UND3 JADE2-211ENST00000612830 1251 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
NPIPA1Q9UND3 PXK-211ENST00000484288 2031 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
NPIPA1Q9UND3 MFF-203ENST00000349901 1716 ntTSL 2 BASIC18.99■□□□□ 0.63
NPIPA1Q9UND3 SBK1-201ENST00000341901 4992 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
NPIPA1Q9UND3 POLR2J3-220ENST00000613744 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
NPIPA1Q9UND3 DACT1-204ENST00000541264 2610 ntAPPRIS ALT2 TSL 2 BASIC18.99■□□□□ 0.63
NPIPA1Q9UND3 MMP23B-202ENST00000378675 1309 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
NPIPA1Q9UND3 TMEM98-206ENST00000579849 4434 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
NPIPA1Q9UND3 LMO4-202ENST00000370544 5405 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
NPIPA1Q9UND3 CDKN2C-203ENST00000396148 2086 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
NPIPA1Q9UND3 WIPF1-207ENST00000410117 777 ntTSL 3 BASIC18.98■□□□□ 0.63
NPIPA1Q9UND3 AL391244.2-201ENST00000428932 543 ntTSL 2 BASIC18.98■□□□□ 0.63
NPIPA1Q9UND3 PET117-201ENST00000432901 1141 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
NPIPA1Q9UND3 PSME3-210ENST00000590720 998 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
NPIPA1Q9UND3 AC092118.2-201ENST00000613495 667 ntBASIC18.98■□□□□ 0.63
NPIPA1Q9UND3 ZNF669-201ENST00000343381 1951 ntAPPRIS P3 TSL 1 (best) BASIC18.98■□□□□ 0.63
NPIPA1Q9UND3 COCH-205ENST00000475087 1997 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
NPIPA1Q9UND3 KLHL17-205ENST00000622660 1950 ntTSL 5 BASIC18.98■□□□□ 0.63
NPIPA1Q9UND3 TRIM67-203ENST00000449018 2166 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
NPIPA1Q9UND3 AC132008.2-203ENST00000418868 1552 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
NPIPA1Q9UND3 TPTEP1-205ENST00000558085 1738 ntTSL 2 BASIC18.97■□□□□ 0.63
NPIPA1Q9UND3 ST3GAL3-207ENST00000353126 1969 ntTSL 5 BASIC18.97■□□□□ 0.63
NPIPA1Q9UND3 PSIP1-201ENST00000380715 1966 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
NPIPA1Q9UND3 FBXL14-201ENST00000339235 2111 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
NPIPA1Q9UND3 C16orf74-201ENST00000284245 906 ntAPPRIS P2 TSL 1 (best) BASIC18.97■□□□□ 0.63
NPIPA1Q9UND3 FMR1-202ENST00000334557 1295 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
NPIPA1Q9UND3 NAA20-202ENST00000334982 1260 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
NPIPA1Q9UND3 SMNDC1-201ENST00000369592 1110 ntAPPRIS P1 TSL 3 BASIC18.97■□□□□ 0.63
NPIPA1Q9UND3 AC027451.1-201ENST00000530667 553 ntTSL 4 BASIC18.97■□□□□ 0.63
NPIPA1Q9UND3 PTGIR-205ENST00000597185 775 ntTSL 3 BASIC18.97■□□□□ 0.63
NPIPA1Q9UND3 FRMD3-204ENST00000376438 2198 ntTSL 2 BASIC18.97■□□□□ 0.63
NPIPA1Q9UND3 FAH-202ENST00000407106 2152 ntAPPRIS P1 TSL 5 BASIC18.97■□□□□ 0.63
NPIPA1Q9UND3 CTGF-201ENST00000367976 2339 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
NPIPA1Q9UND3 RANBP10-202ENST00000448631 2232 ntTSL 2 BASIC18.97■□□□□ 0.63
NPIPA1Q9UND3 COMMD5-207ENST00000543949 1571 ntAPPRIS P1 TSL 3 BASIC18.97■□□□□ 0.63
NPIPA1Q9UND3 ADGRA2-201ENST00000315215 6270 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
NPIPA1Q9UND3 SOX4-201ENST00000244745 5852 ntAPPRIS P1 BASIC18.97■□□□□ 0.63
NPIPA1Q9UND3 NPDC1-202ENST00000371601 1494 ntAPPRIS P2 TSL 1 (best) BASIC18.97■□□□□ 0.63
NPIPA1Q9UND3 RMND5A-201ENST00000283632 6301 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
NPIPA1Q9UND3 OIP5-AS1-202ENST00000501665 1384 ntTSL 2 BASIC18.96■□□□□ 0.63
NPIPA1Q9UND3 MAL-201ENST00000309988 1112 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
NPIPA1Q9UND3 PEX5-204ENST00000412720 2105 ntTSL 2 BASIC18.96■□□□□ 0.63
NPIPA1Q9UND3 SERTAD4-AS1-201ENST00000437764 726 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
NPIPA1Q9UND3 DNAJA4-210ENST00000489435 947 ntTSL 3 BASIC18.96■□□□□ 0.63
NPIPA1Q9UND3 ISCU-212ENST00000547005 795 ntTSL 3 BASIC18.96■□□□□ 0.63
NPIPA1Q9UND3 DDN-AS1-201ENST00000547395 858 ntTSL 2 BASIC18.96■□□□□ 0.63
NPIPA1Q9UND3 LYRM1-205ENST00000562740 931 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
NPIPA1Q9UND3 AC243732.1-201ENST00000612648 864 ntBASIC18.96■□□□□ 0.63
NPIPA1Q9UND3 AL160396.2-202ENST00000636692 566 ntAPPRIS ALT2 TSL 5 BASIC18.96■□□□□ 0.63
NPIPA1Q9UND3 PML-217ENST00000567543 1404 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
NPIPA1Q9UND3 SCARB1-211ENST00000546215 1597 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
NPIPA1Q9UND3 DUX4-204ENST00000569241 1574 ntAPPRIS P2 TSL 1 (best) BASIC18.96■□□□□ 0.63
NPIPA1Q9UND3 DOK3-202ENST00000357198 1729 ntTSL 2 BASIC18.96■□□□□ 0.63
NPIPA1Q9UND3 HSF2BP-201ENST00000291560 1899 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
NPIPA1Q9UND3 VRK2-201ENST00000340157 1888 ntAPPRIS P3 TSL 1 (best) BASIC18.96■□□□□ 0.63
NPIPA1Q9UND3 PPP1R3F-203ENST00000466508 1885 ntTSL 2 BASIC18.96■□□□□ 0.63
NPIPA1Q9UND3 ACHE-201ENST00000241069 2172 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
NPIPA1Q9UND3 SLC35A3-205ENST00000465289 5696 ntAPPRIS P1 TSL 5 BASIC18.96■□□□□ 0.63
Retrieved 100 of 98,524 protein–RNA pairs in 29.3 ms