Protein–RNA interactions for Protein: Q9HBX3

SND1-IT1, Uncharacterized protein encoded by SND1-IT1, humanhuman

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-IT1Q9HBX3 PLEKHH3-204ENST00000591022 2983 ntAPPRIS P2 TSL 1 (best) BASIC13.78□□□□□ -0.2
SND1-IT1Q9HBX3 UBE2QL1-201ENST00000399816 4317 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
SND1-IT1Q9HBX3 CNTNAP3B-212ENST00000617422 2170 ntTSL 2 BASIC13.78□□□□□ -0.2
SND1-IT1Q9HBX3 BIN2-210ENST00000615107 2255 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
SND1-IT1Q9HBX3 ACVR1B-201ENST00000257963 4563 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
SND1-IT1Q9HBX3 ADCY6-202ENST00000357869 5748 ntTSL 2 BASIC13.78□□□□□ -0.2
SND1-IT1Q9HBX3 CYB561-213ENST00000581573 2344 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
SND1-IT1Q9HBX3 N4BP3-201ENST00000274605 6080 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
SND1-IT1Q9HBX3 EVA1B-201ENST00000270824 1054 ntAPPRIS P1 TSL 2 BASIC13.78□□□□□ -0.2
SND1-IT1Q9HBX3 MRPS34-202ENST00000397375 1024 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
SND1-IT1Q9HBX3 AK3-203ENST00000447596 705 ntTSL 2 BASIC13.78□□□□□ -0.2
SND1-IT1Q9HBX3 AC096887.1-203ENST00000607203 768 ntAPPRIS ALT2 TSL 5 BASIC13.78□□□□□ -0.2
SND1-IT1Q9HBX3 PICSAR-201ENST00000615826 733 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
SND1-IT1Q9HBX3 DOK1-201ENST00000233668 2555 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
SND1-IT1Q9HBX3 KCNQ2-213ENST00000626839 9213 ntAPPRIS ALT1 TSL 1 (best) BASIC13.78□□□□□ -0.2
SND1-IT1Q9HBX3 CA9-204ENST00000617161 1374 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
SND1-IT1Q9HBX3 CXXC4-201ENST00000394767 5565 ntAPPRIS P1 TSL 5 BASIC13.78□□□□□ -0.2
SND1-IT1Q9HBX3 NFKBIL1-203ENST00000376148 1478 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
SND1-IT1Q9HBX3 HMBS-201ENST00000278715 1501 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
SND1-IT1Q9HBX3 SNUPN-201ENST00000308588 1513 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
SND1-IT1Q9HBX3 LYSMD2-201ENST00000267838 1759 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
SND1-IT1Q9HBX3 TRABD2A-203ENST00000409520 1975 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
SND1-IT1Q9HBX3 PACSIN3-211ENST00000539589 2009 ntAPPRIS P1 TSL 2 BASIC13.78□□□□□ -0.2
SND1-IT1Q9HBX3 SEMA6B-202ENST00000586965 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
SND1-IT1Q9HBX3 ASPM-201ENST00000294732 6132 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
SND1-IT1Q9HBX3 PALM-207ENST00000590161 2137 ntTSL 4 BASIC13.78□□□□□ -0.2
SND1-IT1Q9HBX3 CXCL16-201ENST00000293778 2222 ntAPPRIS P2 TSL 1 (best) BASIC13.78□□□□□ -0.2
SND1-IT1Q9HBX3 LIMS2-207ENST00000409808 2315 ntAPPRIS ALT1 TSL 5 BASIC13.78□□□□□ -0.2
SND1-IT1Q9HBX3 ZNF771-201ENST00000319296 2371 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
SND1-IT1Q9HBX3 FAM189B-201ENST00000350210 2379 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
SND1-IT1Q9HBX3 BCR-201ENST00000305877 7082 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
SND1-IT1Q9HBX3 NAAA-201ENST00000286733 1900 ntAPPRIS P2 TSL 5 BASIC13.77□□□□□ -0.21
SND1-IT1Q9HBX3 CYP2A7-202ENST00000301146 2281 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
SND1-IT1Q9HBX3 PEX7-201ENST00000318471 1464 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
SND1-IT1Q9HBX3 METTL24-201ENST00000338882 1119 ntAPPRIS P1 TSL 5 BASIC13.77□□□□□ -0.21
SND1-IT1Q9HBX3 AHCYL1-202ENST00000369799 4015 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
SND1-IT1Q9HBX3 SLC16A3-201ENST00000392339 2074 ntAPPRIS P1 TSL 5 BASIC13.77□□□□□ -0.21
SND1-IT1Q9HBX3 SLC16A3-202ENST00000392341 2086 ntAPPRIS P1 TSL 5 BASIC13.77□□□□□ -0.21
SND1-IT1Q9HBX3 GCH1-202ENST00000395514 1977 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
SND1-IT1Q9HBX3 SUMO3-204ENST00000411651 1921 ntTSL 2 BASIC13.77□□□□□ -0.21
SND1-IT1Q9HBX3 MTMR14-206ENST00000420925 1427 ntAPPRIS ALT2 TSL 2 BASIC13.77□□□□□ -0.21
SND1-IT1Q9HBX3 VKORC1L1-202ENST00000434382 1541 ntTSL 2 BASIC13.77□□□□□ -0.21
SND1-IT1Q9HBX3 ERF-202ENST00000440177 2032 ntTSL 2 BASIC13.77□□□□□ -0.21
SND1-IT1Q9HBX3 PDCD2-203ENST00000443345 1897 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
SND1-IT1Q9HBX3 AC004540.2-202ENST00000451264 508 ntTSL 2 BASIC13.77□□□□□ -0.21
SND1-IT1Q9HBX3 MEIS1-AS3-201ENST00000454167 707 ntTSL 4 BASIC13.77□□□□□ -0.21
SND1-IT1Q9HBX3 TSPAN17-204ENST00000503045 1019 ntTSL 5 BASIC13.77□□□□□ -0.21
SND1-IT1Q9HBX3 AP004607.7-201ENST00000527152 1677 ntBASIC13.77□□□□□ -0.21
SND1-IT1Q9HBX3 MIR3181-201ENST00000578512 73 ntBASIC13.77□□□□□ -0.21
SND1-IT1Q9HBX3 JAG1-201ENST00000254958 6048 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
SND1-IT1Q9HBX3 SREBF2-201ENST00000361204 5240 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
SND1-IT1Q9HBX3 GPR135-201ENST00000395116 4578 ntAPPRIS P1 BASIC13.77□□□□□ -0.21
SND1-IT1Q9HBX3 FOXP4-205ENST00000409208 3341 ntAPPRIS P1 TSL 5 BASIC13.77□□□□□ -0.21
SND1-IT1Q9HBX3 MAP7D2-203ENST00000443379 2476 ntAPPRIS ALT2 TSL 2 BASIC13.76□□□□□ -0.21
SND1-IT1Q9HBX3 STX6-201ENST00000258301 4851 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
SND1-IT1Q9HBX3 LMLN-204ENST00000420910 2423 ntAPPRIS P2 TSL 1 (best) BASIC13.76□□□□□ -0.21
SND1-IT1Q9HBX3 KANK4-202ENST00000354381 2103 ntTSL 2 BASIC13.76□□□□□ -0.21
SND1-IT1Q9HBX3 BID-204ENST00000399767 2129 ntTSL 2 BASIC13.76□□□□□ -0.21
SND1-IT1Q9HBX3 RGMB-207ENST00000513185 2052 ntAPPRIS ALT2 TSL 2 BASIC13.76□□□□□ -0.21
SND1-IT1Q9HBX3 MGAT4D-208ENST00000515354 1806 ntTSL 3 BASIC13.76□□□□□ -0.21
SND1-IT1Q9HBX3 SOCS7-202ENST00000613678 1827 ntTSL 5 BASIC13.76□□□□□ -0.21
SND1-IT1Q9HBX3 AC027702.1-201ENST00000563810 1770 ntBASIC13.76□□□□□ -0.21
SND1-IT1Q9HBX3 BASP1-203ENST00000616743 1711 ntAPPRIS P1 TSL 3 BASIC13.76□□□□□ -0.21
SND1-IT1Q9HBX3 ECEL1-201ENST00000304546 2865 ntAPPRIS P3 TSL 1 (best) BASIC13.76□□□□□ -0.21
SND1-IT1Q9HBX3 SOHLH1-202ENST00000425225 1411 ntAPPRIS ALT2 TSL 5 BASIC13.76□□□□□ -0.21
SND1-IT1Q9HBX3 HOMER3-203ENST00000433218 1418 ntAPPRIS ALT1 TSL 5 BASIC13.76□□□□□ -0.21
SND1-IT1Q9HBX3 AC020763.4-201ENST00000623414 4170 ntBASIC13.76□□□□□ -0.21
SND1-IT1Q9HBX3 RCE1-202ENST00000524506 1379 ntTSL 5 BASIC13.76□□□□□ -0.21
SND1-IT1Q9HBX3 CERCAM-202ENST00000372842 5201 ntAPPRIS ALT2 TSL 5 BASIC13.76□□□□□ -0.21
SND1-IT1Q9HBX3 TMEM151B-201ENST00000438774 1140 ntAPPRIS ALT2 TSL 3 BASIC13.76□□□□□ -0.21
SND1-IT1Q9HBX3 CDKN2A-208ENST00000498124 880 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
SND1-IT1Q9HBX3 C1orf232-201ENST00000634842 643 ntAPPRIS P5 TSL 5 BASIC13.76□□□□□ -0.21
SND1-IT1Q9HBX3 SLC35A3-216ENST00000639221 1032 ntTSL 5 BASIC13.76□□□□□ -0.21
SND1-IT1Q9HBX3 ADAM33-202ENST00000356518 3677 ntAPPRIS P3 TSL 1 (best) BASIC13.76□□□□□ -0.21
SND1-IT1Q9HBX3 FA2H-201ENST00000219368 2424 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
SND1-IT1Q9HBX3 SLC16A5-202ENST00000450736 2051 ntAPPRIS P2 TSL 1 (best) BASIC13.76□□□□□ -0.21
SND1-IT1Q9HBX3 UBE2F-201ENST00000272930 2009 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
SND1-IT1Q9HBX3 SNX32-201ENST00000308342 2003 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
SND1-IT1Q9HBX3 ISCA1-203ENST00000375991 1958 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
SND1-IT1Q9HBX3 AC020907.5-201ENST00000624372 1936 ntBASIC13.76□□□□□ -0.21
SND1-IT1Q9HBX3 RCN3-201ENST00000270645 1859 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
SND1-IT1Q9HBX3 FAM91A1-207ENST00000521166 2706 ntTSL 2 BASIC13.76□□□□□ -0.21
SND1-IT1Q9HBX3 CRKL-201ENST00000354336 5325 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
SND1-IT1Q9HBX3 CACNA1A-201ENST00000360228 8627 ntAPPRIS P4 TSL 1 (best) BASIC13.76□□□□□ -0.21
SND1-IT1Q9HBX3 C7orf49-213ENST00000617987 1727 ntTSL 5 BASIC13.76□□□□□ -0.21
SND1-IT1Q9HBX3 TIMM50-201ENST00000314349 1612 ntAPPRIS P2 TSL 1 (best) BASIC13.75□□□□□ -0.21
SND1-IT1Q9HBX3 COMMD5-207ENST00000543949 1571 ntAPPRIS P1 TSL 3 BASIC13.75□□□□□ -0.21
SND1-IT1Q9HBX3 AL020996.1-203ENST00000536896 2307 ntBASIC13.75□□□□□ -0.21
SND1-IT1Q9HBX3 MRGPRF-201ENST00000309099 2295 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
SND1-IT1Q9HBX3 NGEF-202ENST00000373552 2286 ntAPPRIS P1 TSL 2 BASIC13.75□□□□□ -0.21
SND1-IT1Q9HBX3 ATP2A2-201ENST00000308664 4453 ntAPPRIS ALT1 TSL 1 (best) BASIC13.75□□□□□ -0.21
SND1-IT1Q9HBX3 RTN4RL2-201ENST00000335099 2203 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
SND1-IT1Q9HBX3 GNS-208ENST00000543646 2164 ntAPPRIS ALT2 TSL 2 BASIC13.75□□□□□ -0.21
SND1-IT1Q9HBX3 WDR4-202ENST00000398208 2122 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
SND1-IT1Q9HBX3 SLC39A5-209ENST00000454355 1968 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
SND1-IT1Q9HBX3 FDX2-202ENST00000393708 1012 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
SND1-IT1Q9HBX3 GATA2-AS1-201ENST00000464242 1163 ntTSL 2 BASIC13.75□□□□□ -0.21
SND1-IT1Q9HBX3 SLC25A39-203ENST00000537904 1274 ntTSL 2 BASIC13.75□□□□□ -0.21
SND1-IT1Q9HBX3 ACOT1-202ENST00000557556 1271 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
SND1-IT1Q9HBX3 CHD1L-201ENST00000361293 2484 ntTSL 2 BASIC13.75□□□□□ -0.21
Retrieved 100 of 98,524 protein–RNA pairs in 20.9 ms