Protein–RNA interactions for Protein: Q96JI7

SPG11, Spatacsin, humanhuman

Predictions only

Length 2,443 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11Q96JI7 RPL29-209ENST00000495383 713 ntAPPRIS P1 TSL 2 BASIC17.57■□□□□ 0.4
SPG11Q96JI7 AC106791.1-202ENST00000508281 1148 ntTSL 2 BASIC17.57■□□□□ 0.4
SPG11Q96JI7 AC019257.1-201ENST00000517676 557 ntTSL 5 BASIC17.57■□□□□ 0.4
SPG11Q96JI7 SLC52A2-205ENST00000526752 710 ntTSL 3 BASIC17.57■□□□□ 0.4
SPG11Q96JI7 BTBD7-201ENST00000298896 2621 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
SPG11Q96JI7 PTPN13-205ENST00000502971 1708 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
SPG11Q96JI7 ZNF302-215ENST00000627982 1723 ntAPPRIS ALT2 TSL 5 BASIC17.57■□□□□ 0.4
SPG11Q96JI7 PWWP2A-205ENST00000523662 1819 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
SPG11Q96JI7 AC026471.6-201ENST00000622954 1905 ntBASIC17.57■□□□□ 0.4
SPG11Q96JI7 NPAS3-210ENST00000551492 2817 ntAPPRIS ALT2 TSL 5 BASIC17.57■□□□□ 0.4
SPG11Q96JI7 METTL21A-204ENST00000425132 869 ntTSL 2 BASIC17.57■□□□□ 0.4
SPG11Q96JI7 SERP1-205ENST00000487153 657 ntTSL 4 BASIC17.57■□□□□ 0.4
SPG11Q96JI7 AZIN1-AS1-215ENST00000522939 644 ntTSL 2 BASIC17.57■□□□□ 0.4
SPG11Q96JI7 AL049597.2-201ENST00000565575 961 ntBASIC17.57■□□□□ 0.4
SPG11Q96JI7 RBM42-204ENST00000589559 1328 ntTSL 5 BASIC17.57■□□□□ 0.4
SPG11Q96JI7 GCA-201ENST00000233612 1694 ntTSL 2 BASIC17.57■□□□□ 0.4
SPG11Q96JI7 CDK5-204ENST00000485972 1758 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
SPG11Q96JI7 R3HDM4-203ENST00000587975 1765 ntTSL 3 BASIC17.57■□□□□ 0.4
SPG11Q96JI7 GTF2IP1-204ENST00000616377 2632 ntTSL 2 BASIC17.56■□□□□ 0.4
SPG11Q96JI7 RNF19B-203ENST00000373456 2560 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
SPG11Q96JI7 HERC2P8-204ENST00000567073 1988 ntTSL 5 BASIC17.56■□□□□ 0.4
SPG11Q96JI7 ASPSCR1-202ENST00000306739 1843 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
SPG11Q96JI7 MARC2-201ENST00000359316 1335 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
SPG11Q96JI7 CDX1-202ENST00000616154 1343 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
SPG11Q96JI7 UFD1-202ENST00000399523 1007 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
SPG11Q96JI7 AC007322.3-201ENST00000426526 701 ntBASIC17.56■□□□□ 0.4
SPG11Q96JI7 AC099329.3-201ENST00000431549 602 ntAPPRIS P1 TSL 4 BASIC17.56■□□□□ 0.4
SPG11Q96JI7 KCNIP3-205ENST00000468529 985 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
SPG11Q96JI7 SIVA1-203ENST00000535554 1244 ntAPPRIS ALT1 TSL 2 BASIC17.56■□□□□ 0.4
SPG11Q96JI7 AC090970.2-201ENST00000561318 865 ntTSL 5 BASIC17.56■□□□□ 0.4
SPG11Q96JI7 FBXO17-202ENST00000595329 1299 ntAPPRIS P1 TSL 2 BASIC17.56■□□□□ 0.4
SPG11Q96JI7 SMAGP-204ENST00000603838 816 ntTSL 2 BASIC17.56■□□□□ 0.4
SPG11Q96JI7 MAGI2-211ENST00000535697 6146 ntTSL 5 BASIC17.56■□□□□ 0.4
SPG11Q96JI7 C3orf80-201ENST00000326474 2718 ntAPPRIS P1 BASIC17.56■□□□□ 0.4
SPG11Q96JI7 EFCC1-201ENST00000436022 2691 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
SPG11Q96JI7 CDKN1C-202ENST00000414822 2051 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
SPG11Q96JI7 CPLX1-203ENST00000505203 2011 ntTSL 2 BASIC17.56■□□□□ 0.4
SPG11Q96JI7 DDRGK1-201ENST00000354488 1306 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
SPG11Q96JI7 NXN-202ENST00000537628 1340 ntTSL 3 BASIC17.56■□□□□ 0.4
SPG11Q96JI7 ACP1-205ENST00000407983 703 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
SPG11Q96JI7 C4orf48-202ENST00000409860 477 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
SPG11Q96JI7 UNC5B-AS1-201ENST00000447119 647 ntTSL 2 BASIC17.56■□□□□ 0.4
SPG11Q96JI7 PRKY-204ENST00000533551 1019 ntBASIC17.56■□□□□ 0.4
SPG11Q96JI7 ARF3-208ENST00000541959 807 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
SPG11Q96JI7 DUT-205ENST00000558813 769 ntTSL 2 BASIC17.56■□□□□ 0.4
SPG11Q96JI7 RNF38-205ENST00000377877 1974 ntTSL 2 BASIC17.56■□□□□ 0.4
SPG11Q96JI7 SYNC-201ENST00000373484 1824 ntAPPRIS ALT2 TSL 2 BASIC17.55■□□□□ 0.4
SPG11Q96JI7 PAGR1-201ENST00000320330 1702 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
SPG11Q96JI7 C9orf163-202ENST00000624034 2573 ntBASIC17.55■□□□□ 0.4
SPG11Q96JI7 IKBIP-203ENST00000393042 1368 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
SPG11Q96JI7 COX7A2L-201ENST00000234301 1112 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
SPG11Q96JI7 CTAG2-201ENST00000247306 993 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
SPG11Q96JI7 TPSAB1-201ENST00000338844 1175 ntAPPRIS P2 TSL 1 (best) BASIC17.55■□□□□ 0.4
SPG11Q96JI7 TBC1D7-201ENST00000343141 1027 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
SPG11Q96JI7 DBNL-214ENST00000456905 1241 ntTSL 2 BASIC17.55■□□□□ 0.4
SPG11Q96JI7 TMEM204-201ENST00000253934 1686 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
SPG11Q96JI7 ALDH5A1-204ENST00000491546 1699 ntTSL 5 BASIC17.55■□□□□ 0.4
SPG11Q96JI7 NAA20-203ENST00000398602 1604 ntTSL 5 BASIC17.55■□□□□ 0.4
SPG11Q96JI7 TSPAN3-210ENST00000561277 1592 ntTSL 5 BASIC17.55■□□□□ 0.4
SPG11Q96JI7 DISC1-223ENST00000628350 2363 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
SPG11Q96JI7 TXNL1-211ENST00000590954 1339 ntAPPRIS P1 TSL 2 BASIC17.55■□□□□ 0.4
SPG11Q96JI7 CLDND2-201ENST00000291715 974 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
SPG11Q96JI7 MDK-201ENST00000359803 985 ntAPPRIS P2 TSL 2 BASIC17.55■□□□□ 0.4
SPG11Q96JI7 NDUFA13-201ENST00000428459 576 ntTSL 2 BASIC17.55■□□□□ 0.4
SPG11Q96JI7 LINC00969-218ENST00000452844 583 ntTSL 3 BASIC17.55■□□□□ 0.4
SPG11Q96JI7 LINC00969-221ENST00000457233 1279 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
SPG11Q96JI7 TMEM191C-212ENST00000536718 480 ntAPPRIS ALT2 TSL 5 BASIC17.55■□□□□ 0.4
SPG11Q96JI7 PDCD5-207ENST00000590247 699 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
SPG11Q96JI7 TMEM191B-203ENST00000613597 366 ntAPPRIS ALT2 TSL 5 BASIC17.55■□□□□ 0.4
SPG11Q96JI7 YY1AP1-212ENST00000404643 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
SPG11Q96JI7 KLHL35-201ENST00000376292 1500 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
SPG11Q96JI7 ILKAP-201ENST00000254654 1490 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
SPG11Q96JI7 JAG2-201ENST00000331782 5835 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
SPG11Q96JI7 RYK-209ENST00000623711 2934 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
SPG11Q96JI7 GGT1-206ENST00000404223 952 ntTSL 2 BASIC17.54■□□□□ 0.4
SPG11Q96JI7 METTL21A-206ENST00000432416 869 ntTSL 3 BASIC17.54■□□□□ 0.4
SPG11Q96JI7 SMIM20-201ENST00000506197 935 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
SPG11Q96JI7 AC126696.3-202ENST00000570159 553 ntTSL 5 BASIC17.54■□□□□ 0.4
SPG11Q96JI7 CES1P1-204ENST00000574030 877 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
SPG11Q96JI7 GGTLC2-204ENST00000613850 973 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
SPG11Q96JI7 GGTLC2-205ENST00000618722 1047 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
SPG11Q96JI7 CDC123-201ENST00000281141 1542 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
SPG11Q96JI7 ZIM2-201ENST00000593711 2083 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
SPG11Q96JI7 UHRF1BP1L-202ENST00000356828 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
SPG11Q96JI7 TSEN15-201ENST00000361641 1960 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
SPG11Q96JI7 STOML1-201ENST00000316900 2169 ntTSL 2 BASIC17.54■□□□□ 0.4
SPG11Q96JI7 MYBL1-204ENST00000522677 5192 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
SPG11Q96JI7 AP006623.1-201ENST00000506172 2061 ntTSL 5 BASIC17.54■□□□□ 0.4
SPG11Q96JI7 AC092053.2-201ENST00000640557 1818 ntBASIC17.54■□□□□ 0.4
SPG11Q96JI7 CDKN2B-AS1-217ENST00000585267 1337 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
SPG11Q96JI7 FMR1-AS1-201ENST00000594922 2005 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
SPG11Q96JI7 PGAM5-204ENST00000543955 1773 ntTSL 2 BASIC17.54■□□□□ 0.4
SPG11Q96JI7 CABP2-202ENST00000353903 789 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
SPG11Q96JI7 DMRT2-206ENST00000412350 1244 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
SPG11Q96JI7 CROCCP2-205ENST00000639481 1296 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
SPG11Q96JI7 ARHGAP8-204ENST00000389774 1725 ntAPPRIS ALT2 TSL 2 BASIC17.53■□□□□ 0.4
SPG11Q96JI7 CYHR1-202ENST00000403000 1477 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
SPG11Q96JI7 RAB11FIP3-201ENST00000262305 4831 ntAPPRIS P2 TSL 1 (best) BASIC17.53■□□□□ 0.4
SPG11Q96JI7 KLC1-201ENST00000246489 2294 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
SPG11Q96JI7 KLC1-224ENST00000557450 2265 ntTSL 5 BASIC17.53■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 37.8 ms