Protein–RNA interactions for Protein: Q6ZW05

PTCHD4, Patched domain-containing protein 4, humanhuman

Predictions only

Length 846 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD4Q6ZW05 DISC1-202ENST00000317586 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
PTCHD4Q6ZW05 EXOG-203ENST00000422077 1317 ntTSL 2 BASIC18.93■□□□□ 0.62
PTCHD4Q6ZW05 PACSIN3-211ENST00000539589 2009 ntAPPRIS P1 TSL 2 BASIC18.93■□□□□ 0.62
PTCHD4Q6ZW05 NBPF9-209ENST00000621645 5632 ntAPPRIS ALT2 TSL 2 BASIC18.93■□□□□ 0.62
PTCHD4Q6ZW05 AC008406.3-201ENST00000620001 1374 ntBASIC18.93■□□□□ 0.62
PTCHD4Q6ZW05 HS3ST4-201ENST00000331351 3203 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
PTCHD4Q6ZW05 PTGER2-201ENST00000245457 2383 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
PTCHD4Q6ZW05 GRB14-201ENST00000263915 2382 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
PTCHD4Q6ZW05 HPS6-201ENST00000299238 2649 ntAPPRIS P1 BASIC18.92■□□□□ 0.62
PTCHD4Q6ZW05 CCDC47-202ENST00000403162 2195 ntAPPRIS P1 TSL 2 BASIC18.92■□□□□ 0.62
PTCHD4Q6ZW05 CLDN23-201ENST00000519106 2169 ntAPPRIS P1 BASIC18.92■□□□□ 0.62
PTCHD4Q6ZW05 CNTNAP3B-212ENST00000617422 2170 ntTSL 2 BASIC18.92■□□□□ 0.62
PTCHD4Q6ZW05 IL17RE-206ENST00000454190 2757 ntTSL 2 BASIC18.92■□□□□ 0.62
PTCHD4Q6ZW05 CCNE1-201ENST00000262643 2043 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
PTCHD4Q6ZW05 UBE2F-201ENST00000272930 2009 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
PTCHD4Q6ZW05 RBM45-207ENST00000616198 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC18.92■□□□□ 0.62
PTCHD4Q6ZW05 DLG3-202ENST00000374355 5074 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
PTCHD4Q6ZW05 AL590128.2-201ENST00000442889 415 ntTSL 3 BASIC18.92■□□□□ 0.62
PTCHD4Q6ZW05 MCRIP1-204ENST00000570507 765 ntTSL 2 BASIC18.92■□□□□ 0.62
PTCHD4Q6ZW05 ACAP1-206ENST00000571471 320 ntTSL 2 BASIC18.92■□□□□ 0.62
PTCHD4Q6ZW05 MCRIP1-208ENST00000575061 618 ntTSL 5 BASIC18.92■□□□□ 0.62
PTCHD4Q6ZW05 CNOT6-201ENST00000261951 6176 ntAPPRIS P1 TSL 5 BASIC18.92■□□□□ 0.62
PTCHD4Q6ZW05 PYCR3-207ENST00000495276 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
PTCHD4Q6ZW05 NRN1-203ENST00000616243 1556 ntAPPRIS P1 TSL 4 BASIC18.92■□□□□ 0.62
PTCHD4Q6ZW05 MON1A-201ENST00000296473 2370 ntAPPRIS P3 TSL 1 (best) BASIC18.92■□□□□ 0.62
PTCHD4Q6ZW05 NRP2-206ENST00000417189 2386 ntTSL 2 BASIC18.92■□□□□ 0.62
PTCHD4Q6ZW05 XYLT1-201ENST00000261381 9891 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
PTCHD4Q6ZW05 AC079328.2-202ENST00000560903 1410 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
PTCHD4Q6ZW05 TM7SF2-201ENST00000279263 1722 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
PTCHD4Q6ZW05 C7orf49-213ENST00000617987 1727 ntTSL 5 BASIC18.91■□□□□ 0.62
PTCHD4Q6ZW05 NR1D2-201ENST00000312521 5258 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
PTCHD4Q6ZW05 CBWD6-201ENST00000377391 1792 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
PTCHD4Q6ZW05 COPS7A-222ENST00000626119 1768 ntTSL 3 BASIC18.91■□□□□ 0.62
PTCHD4Q6ZW05 YTHDF3-213ENST00000621820 2363 ntTSL 2 BASIC18.91■□□□□ 0.62
PTCHD4Q6ZW05 SUMF2-201ENST00000275607 1894 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
PTCHD4Q6ZW05 BAALC-203ENST00000309982 2831 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
PTCHD4Q6ZW05 CCDC107-203ENST00000378407 899 ntAPPRIS ALT2 TSL 2 BASIC18.91■□□□□ 0.62
PTCHD4Q6ZW05 CDKN2B-202ENST00000380142 859 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
PTCHD4Q6ZW05 AC099791.1-201ENST00000416440 715 ntBASIC18.91■□□□□ 0.62
PTCHD4Q6ZW05 PEMT-206ENST00000435340 960 ntTSL 5 BASIC18.91■□□□□ 0.62
PTCHD4Q6ZW05 LRRC75A-AS1-202ENST00000470491 1057 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
PTCHD4Q6ZW05 TUSC3-209ENST00000509380 1266 ntTSL 5 BASIC18.91■□□□□ 0.62
PTCHD4Q6ZW05 SCO2-204ENST00000543927 1051 ntAPPRIS P1 TSL 2 BASIC18.91■□□□□ 0.62
PTCHD4Q6ZW05 PPP1R14A-204ENST00000591291 433 ntTSL 5 BASIC18.91■□□□□ 0.62
PTCHD4Q6ZW05 SUMO3-204ENST00000411651 1921 ntTSL 2 BASIC18.91■□□□□ 0.62
PTCHD4Q6ZW05 BCL7A-201ENST00000261822 2581 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
PTCHD4Q6ZW05 SERBP1-202ENST00000370990 1621 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
PTCHD4Q6ZW05 SCN1B-206ENST00000638536 1600 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
PTCHD4Q6ZW05 LRRC3B-201ENST00000396641 1696 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
PTCHD4Q6ZW05 OSCAR-208ENST00000611261 2061 ntAPPRIS P4 TSL 5 BASIC18.91■□□□□ 0.62
PTCHD4Q6ZW05 HAND2-AS1-237ENST00000616485 2420 ntTSL 2 BASIC18.91■□□□□ 0.62
PTCHD4Q6ZW05 MAP7D2-203ENST00000443379 2476 ntAPPRIS ALT2 TSL 2 BASIC18.91■□□□□ 0.62
PTCHD4Q6ZW05 LYSMD2-201ENST00000267838 1759 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
PTCHD4Q6ZW05 CATSPER2-201ENST00000321596 1820 ntAPPRIS P3 TSL 5 BASIC18.9■□□□□ 0.62
PTCHD4Q6ZW05 FAHD1-202ENST00000382668 1845 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
PTCHD4Q6ZW05 ZGPAT-204ENST00000369967 1890 ntAPPRIS P1 TSL 5 BASIC18.9■□□□□ 0.62
PTCHD4Q6ZW05 NXN-201ENST00000336868 3036 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
PTCHD4Q6ZW05 SH3BP2-204ENST00000452765 2265 ntAPPRIS P3 TSL 1 (best) BASIC18.9■□□□□ 0.62
PTCHD4Q6ZW05 NRXN1-208ENST00000405472 5724 ntAPPRIS ALT2 TSL 5 BASIC18.9■□□□□ 0.62
PTCHD4Q6ZW05 TPD52-209ENST00000518937 2856 ntTSL 2 BASIC18.9■□□□□ 0.62
PTCHD4Q6ZW05 SPRTN-201ENST00000008440 1667 ntTSL 2 BASIC18.9■□□□□ 0.62
PTCHD4Q6ZW05 HES4-201ENST00000304952 899 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
PTCHD4Q6ZW05 C16orf86-201ENST00000403458 1267 ntAPPRIS P2 TSL 1 (best) BASIC18.9■□□□□ 0.62
PTCHD4Q6ZW05 HM13-AS1-201ENST00000412178 489 ntTSL 3 BASIC18.9■□□□□ 0.62
PTCHD4Q6ZW05 CAMTA1-208ENST00000473578 567 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
PTCHD4Q6ZW05 PBX2P1-201ENST00000493219 1291 ntBASIC18.9■□□□□ 0.62
PTCHD4Q6ZW05 NDUFS3-206ENST00000528192 561 ntTSL 5 BASIC18.9■□□□□ 0.62
PTCHD4Q6ZW05 TRAPPC6A-205ENST00000592647 514 ntTSL 2 BASIC18.9■□□□□ 0.62
PTCHD4Q6ZW05 KLF13-201ENST00000307145 6825 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
PTCHD4Q6ZW05 PQLC2-201ENST00000375153 2153 ntAPPRIS P1 TSL 2 BASIC18.9■□□□□ 0.62
PTCHD4Q6ZW05 UQCR11-203ENST00000591899 1324 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
PTCHD4Q6ZW05 DTX2-212ENST00000446820 1770 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
PTCHD4Q6ZW05 MTMR9LP-202ENST00000423995 1878 ntTSL 2 BASIC18.9■□□□□ 0.62
PTCHD4Q6ZW05 ZNF771-201ENST00000319296 2371 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
PTCHD4Q6ZW05 INSR-201ENST00000302850 4721 ntAPPRIS P3 TSL 1 (best) BASIC18.89■□□□□ 0.62
PTCHD4Q6ZW05 SLC2A11-202ENST00000316185 1555 ntTSL 1 (best) BASIC18.89■□□□□ 0.62
PTCHD4Q6ZW05 AC090360.1-201ENST00000569722 2218 ntAPPRIS ALT2 TSL 2 BASIC18.89■□□□□ 0.61
PTCHD4Q6ZW05 TCP11-203ENST00000373974 1689 ntAPPRIS ALT2 TSL 2 BASIC18.89■□□□□ 0.61
PTCHD4Q6ZW05 S1PR5-204ENST00000617721 1698 ntTSL 5 BASIC18.89■□□□□ 0.61
PTCHD4Q6ZW05 CDO1-201ENST00000250535 1860 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
PTCHD4Q6ZW05 ARNTL2-209ENST00000546179 1861 ntAPPRIS ALT2 TSL 2 BASIC18.89■□□□□ 0.61
PTCHD4Q6ZW05 ZNF696-205ENST00000521537 705 ntTSL 2 BASIC18.89■□□□□ 0.61
PTCHD4Q6ZW05 AL359317.1-201ENST00000556316 578 ntTSL 4 BASIC18.89■□□□□ 0.61
PTCHD4Q6ZW05 ARHGDIA-201ENST00000269321 1906 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
PTCHD4Q6ZW05 HMOX2-218ENST00000619913 1908 ntAPPRIS P1 TSL 5 BASIC18.89■□□□□ 0.61
PTCHD4Q6ZW05 SPAST-203ENST00000615843 5212 ntAPPRIS P4 TSL 1 (best) BASIC18.89■□□□□ 0.61
PTCHD4Q6ZW05 BHLHE22-201ENST00000321870 3262 ntAPPRIS P1 BASIC18.89■□□□□ 0.61
PTCHD4Q6ZW05 P4HB-201ENST00000331483 2603 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
PTCHD4Q6ZW05 PRKCD-202ENST00000394729 2810 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
PTCHD4Q6ZW05 PROSER2-205ENST00000622831 1646 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
PTCHD4Q6ZW05 CHD1L-201ENST00000361293 2484 ntTSL 2 BASIC18.89■□□□□ 0.61
PTCHD4Q6ZW05 KLHDC4-204ENST00000353170 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
PTCHD4Q6ZW05 CBWD3-202ENST00000377342 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
PTCHD4Q6ZW05 NDUFB2-212ENST00000476279 1666 ntAPPRIS P1 TSL 5 BASIC18.89■□□□□ 0.61
PTCHD4Q6ZW05 KCNK17-202ENST00000453413 1706 ntAPPRIS ALT2 TSL 5 BASIC18.88■□□□□ 0.61
PTCHD4Q6ZW05 LSM11-201ENST00000286307 6584 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
PTCHD4Q6ZW05 LHX9-206ENST00000561173 2144 ntTSL 5 BASIC18.88■□□□□ 0.61
PTCHD4Q6ZW05 TRIM58-201ENST00000366481 3225 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
PTCHD4Q6ZW05 HOXA11-201ENST00000006015 2295 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
PTCHD4Q6ZW05 SRSF4-201ENST00000373795 2387 ntAPPRIS P2 TSL 1 (best) BASIC18.88■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 22.8 ms