Protein–RNA interactions for Protein: Q6ISU1

PTCRA, Pre T-cell antigen receptor alpha, humanhuman

Predicted RBP Predictions only

Length 281 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCRAQ6ISU1 UNC5B-AS1-201ENST00000447119 647 ntTSL 2 BASIC21.46■■□□□ 1.03
PTCRAQ6ISU1 SERP1-205ENST00000487153 657 ntTSL 4 BASIC21.46■■□□□ 1.03
PTCRAQ6ISU1 LINC01956-201ENST00000557729 695 ntTSL 5 BASIC21.46■■□□□ 1.03
PTCRAQ6ISU1 EFTUD1P1-201ENST00000558187 596 ntTSL 4 BASIC21.46■■□□□ 1.03
PTCRAQ6ISU1 AF186192.3-201ENST00000583427 947 ntBASIC21.46■■□□□ 1.03
PTCRAQ6ISU1 AC018553.2-201ENST00000637770 1064 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
PTCRAQ6ISU1 ARHGAP8-204ENST00000389774 1725 ntAPPRIS ALT2 TSL 2 BASIC21.46■■□□□ 1.03
PTCRAQ6ISU1 IL17RE-203ENST00000421412 2158 ntAPPRIS ALT2 TSL 1 (best) BASIC21.46■■□□□ 1.03
PTCRAQ6ISU1 NEURL3-204ENST00000451794 1461 ntAPPRIS P1 TSL 5 BASIC21.45■■□□□ 1.03
PTCRAQ6ISU1 IRF3-221ENST00000598808 1468 ntTSL 5 BASIC21.45■■□□□ 1.03
PTCRAQ6ISU1 AC134772.1-201ENST00000438872 885 ntTSL 3 BASIC21.45■■□□□ 1.02
PTCRAQ6ISU1 CHCHD6-204ENST00000508789 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC21.45■■□□□ 1.02
PTCRAQ6ISU1 PDCD2L-203ENST00000587065 492 ntTSL 3 BASIC21.45■■□□□ 1.02
PTCRAQ6ISU1 PTPN13-205ENST00000502971 1708 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
PTCRAQ6ISU1 GTF2IP1-204ENST00000616377 2632 ntTSL 2 BASIC21.45■■□□□ 1.02
PTCRAQ6ISU1 AMIGO1-201ENST00000369862 2229 ntAPPRIS P1 TSL 5 BASIC21.45■■□□□ 1.02
PTCRAQ6ISU1 CDKN1C-204ENST00000440480 1811 ntAPPRIS ALT2 TSL 1 (best) BASIC21.45■■□□□ 1.02
PTCRAQ6ISU1 TOX2-201ENST00000341197 1880 ntAPPRIS P1 TSL 2 BASIC21.45■■□□□ 1.02
PTCRAQ6ISU1 PCSK6-216ENST00000615296 2921 ntTSL 5 BASIC21.45■■□□□ 1.02
PTCRAQ6ISU1 CYHR1-202ENST00000403000 1477 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
PTCRAQ6ISU1 TMEM204-201ENST00000253934 1686 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
PTCRAQ6ISU1 TGIF1-206ENST00000405385 1689 ntTSL 2 BASIC21.44■■□□□ 1.02
PTCRAQ6ISU1 WWTR1-AS1-202ENST00000479752 1700 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
PTCRAQ6ISU1 GPR143-203ENST00000467482 1762 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
PTCRAQ6ISU1 TARBP2-201ENST00000266987 1867 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
PTCRAQ6ISU1 RPP25L-201ENST00000297613 1092 ntAPPRIS P1 TSL 2 BASIC21.44■■□□□ 1.02
PTCRAQ6ISU1 PFN3-201ENST00000358571 530 ntAPPRIS P1 BASIC21.44■■□□□ 1.02
PTCRAQ6ISU1 AL390719.1-204ENST00000412397 1219 ntBASIC21.44■■□□□ 1.02
PTCRAQ6ISU1 AC009487.1-202ENST00000437683 402 ntTSL 2 BASIC21.44■■□□□ 1.02
PTCRAQ6ISU1 NELFE-206ENST00000444811 1202 ntAPPRIS ALT2 TSL 2 BASIC21.44■■□□□ 1.02
PTCRAQ6ISU1 AC098829.1-201ENST00000502344 630 ntTSL 3 BASIC21.44■■□□□ 1.02
PTCRAQ6ISU1 CDKN3-209ENST00000556102 938 ntTSL 5 BASIC21.44■■□□□ 1.02
PTCRAQ6ISU1 AC140504.1-202ENST00000568222 652 ntTSL 5 BASIC21.44■■□□□ 1.02
PTCRAQ6ISU1 LRRC75A-AS1-225ENST00000581913 1091 ntTSL 2 BASIC21.44■■□□□ 1.02
PTCRAQ6ISU1 NTF6B-201ENST00000591913 560 ntBASIC21.44■■□□□ 1.02
PTCRAQ6ISU1 TMEM114-203ENST00000620492 945 ntAPPRIS P1 TSL 2 BASIC21.44■■□□□ 1.02
PTCRAQ6ISU1 DECR2-212ENST00000627716 352 ntTSL 2 BASIC21.44■■□□□ 1.02
PTCRAQ6ISU1 CAPN10-204ENST00000354082 1999 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
PTCRAQ6ISU1 CENPS-CORT-204ENST00000602296 1326 ntTSL 3 BASIC21.44■■□□□ 1.02
PTCRAQ6ISU1 VEGFB-201ENST00000309422 1380 ntAPPRIS P3 TSL 1 (best) BASIC21.44■■□□□ 1.02
PTCRAQ6ISU1 TSTA3-201ENST00000425753 1362 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
PTCRAQ6ISU1 ROPN1-209ENST00000495093 1376 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
PTCRAQ6ISU1 PABPN1-202ENST00000397276 2768 ntAPPRIS ALT1 TSL 1 (best) BASIC21.44■■□□□ 1.02
PTCRAQ6ISU1 KRT8P9-201ENST00000558927 1449 ntBASIC21.44■■□□□ 1.02
PTCRAQ6ISU1 FDXR-219ENST00000583917 1762 ntTSL 5 BASIC21.43■■□□□ 1.02
PTCRAQ6ISU1 USP36-218ENST00000590546 1771 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
PTCRAQ6ISU1 C11orf96-202ENST00000528572 1834 ntBASIC21.43■■□□□ 1.02
PTCRAQ6ISU1 IGF2-AS-201ENST00000381361 2063 ntTSL 2 BASIC21.43■■□□□ 1.02
PTCRAQ6ISU1 SELENOF-202ENST00000370554 1220 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
PTCRAQ6ISU1 RNF5-203ENST00000375094 1168 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
PTCRAQ6ISU1 ROPN1L-202ENST00000503804 1291 ntAPPRIS P1 TSL 2 BASIC21.43■■□□□ 1.02
PTCRAQ6ISU1 ARF3-208ENST00000541959 807 ntAPPRIS P1 TSL 5 BASIC21.43■■□□□ 1.02
PTCRAQ6ISU1 TMEM235-204ENST00000551068 1187 ntAPPRIS P1 TSL 5 BASIC21.43■■□□□ 1.02
PTCRAQ6ISU1 AC006942.1-201ENST00000600669 520 ntTSL 2 BASIC21.43■■□□□ 1.02
PTCRAQ6ISU1 SPINK2-206ENST00000618802 608 ntTSL 3 BASIC21.43■■□□□ 1.02
PTCRAQ6ISU1 HTR7P1-201ENST00000538670 1336 ntBASIC21.43■■□□□ 1.02
PTCRAQ6ISU1 NFKBIL1-201ENST00000376145 1401 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
PTCRAQ6ISU1 AC138028.2-201ENST00000440406 1539 ntTSL 2 BASIC21.43■■□□□ 1.02
PTCRAQ6ISU1 COMMD5-207ENST00000543949 1571 ntAPPRIS P1 TSL 3 BASIC21.43■■□□□ 1.02
PTCRAQ6ISU1 TSC22D3-205ENST00000372390 1812 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
PTCRAQ6ISU1 RBMS1-205ENST00000409972 1815 ntTSL 5 BASIC21.43■■□□□ 1.02
PTCRAQ6ISU1 RNF8-204ENST00000469731 1800 ntTSL 5 BASIC21.43■■□□□ 1.02
PTCRAQ6ISU1 SMAD1-201ENST00000302085 1966 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
PTCRAQ6ISU1 TOP1MT-201ENST00000329245 1958 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
PTCRAQ6ISU1 SRPK3-202ENST00000370101 1958 ntAPPRIS P3 TSL 1 (best) BASIC21.43■■□□□ 1.02
PTCRAQ6ISU1 KLC1-203ENST00000347839 2271 ntTSL 5 BASIC21.43■■□□□ 1.02
PTCRAQ6ISU1 PAGR1-201ENST00000320330 1702 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
PTCRAQ6ISU1 RER1-204ENST00000378518 522 ntTSL 3 BASIC21.42■■□□□ 1.02
PTCRAQ6ISU1 MEIOB-202ENST00000397344 1792 ntTSL 5 BASIC21.42■■□□□ 1.02
PTCRAQ6ISU1 CTNNBIP1-204ENST00000400904 1206 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
PTCRAQ6ISU1 AL162231.1-203ENST00000416454 465 ntAPPRIS ALT2 TSL 2 BASIC21.42■■□□□ 1.02
PTCRAQ6ISU1 FAM197Y1-201ENST00000421178 764 ntBASIC21.42■■□□□ 1.02
PTCRAQ6ISU1 ZNF534-203ENST00000432303 956 ntTSL 2 BASIC21.42■■□□□ 1.02
PTCRAQ6ISU1 BZW1-209ENST00000452790 1473 ntTSL 2 BASIC21.42■■□□□ 1.02
PTCRAQ6ISU1 TTTY14-205ENST00000454875 544 ntTSL 2 BASIC21.42■■□□□ 1.02
PTCRAQ6ISU1 ESR1-210ENST00000456483 1368 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
PTCRAQ6ISU1 REPIN1-217ENST00000518514 478 ntTSL 3 BASIC21.42■■□□□ 1.02
PTCRAQ6ISU1 HAS1-202ENST00000540069 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC21.42■■□□□ 1.02
PTCRAQ6ISU1 AL929601.1-201ENST00000551565 573 ntTSL 4 BASIC21.42■■□□□ 1.02
PTCRAQ6ISU1 AC087388.1-201ENST00000571370 1112 ntBASIC21.42■■□□□ 1.02
PTCRAQ6ISU1 ANAPC11-207ENST00000572639 578 ntAPPRIS P1 TSL 3 BASIC21.42■■□□□ 1.02
PTCRAQ6ISU1 Six3os1_6.1-201ENST00000620790 196 ntBASIC21.42■■□□□ 1.02
PTCRAQ6ISU1 AC008735.6-201ENST00000635964 1292 ntAPPRIS P1 TSL 2 BASIC21.42■■□□□ 1.02
PTCRAQ6ISU1 FBXL22-204ENST00000638704 729 ntAPPRIS ALT2 TSL 2 BASIC21.42■■□□□ 1.02
PTCRAQ6ISU1 LINC01568-207ENST00000641790 1380 ntBASIC21.42■■□□□ 1.02
PTCRAQ6ISU1 SNTA1-201ENST00000217381 2342 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
PTCRAQ6ISU1 AC139530.1-201ENST00000575312 1977 ntBASIC21.41■■□□□ 1.02
PTCRAQ6ISU1 NKIRAS2-206ENST00000393885 1909 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
PTCRAQ6ISU1 HOXD9-201ENST00000249499 1870 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
PTCRAQ6ISU1 RARG-201ENST00000338561 1836 ntAPPRIS ALT1 TSL 1 (best) BASIC21.41■■□□□ 1.02
PTCRAQ6ISU1 NELFE-202ENST00000375429 1584 ntAPPRIS P2 TSL 1 (best) BASIC21.41■■□□□ 1.02
PTCRAQ6ISU1 HOXA4-202ENST00000428284 1595 ntAPPRIS P1 TSL 2 BASIC21.41■■□□□ 1.02
PTCRAQ6ISU1 PLCG1-AS1-201ENST00000454626 1462 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
PTCRAQ6ISU1 CXorf40A-204ENST00000423421 1403 ntAPPRIS P3 TSL 1 (best) BASIC21.41■■□□□ 1.02
PTCRAQ6ISU1 SOX15-201ENST00000250055 1396 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
PTCRAQ6ISU1 NELFB-201ENST00000343053 2698 ntAPPRIS ALT2 TSL 1 (best) BASIC21.41■■□□□ 1.02
PTCRAQ6ISU1 IGHV3-73-201ENST00000390636 437 ntAPPRIS P1 BASIC21.41■■□□□ 1.02
PTCRAQ6ISU1 AL137013.1-201ENST00000432946 1228 ntBASIC21.41■■□□□ 1.02
PTCRAQ6ISU1 ABCC5-211ENST00000446941 883 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
PTCRAQ6ISU1 RBM17P1-201ENST00000453646 1190 ntBASIC21.41■■□□□ 1.02
Retrieved 100 of 98,524 protein–RNA pairs in 30.3 ms