Protein–RNA interactions for Protein: P83110

HTRA3, Serine protease HTRA3, humanhuman

Predictions only

Length 453 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HTRA3P83110 NEURL2-201ENST00000372518 1278 ntAPPRIS P1 TSL 1 (best) BASIC24.34■■□□□ 1.49
HTRA3P83110 AC063952.2-201ENST00000498792 1227 ntBASIC24.34■■□□□ 1.49
HTRA3P83110 BAALC-AS1-207ENST00000522856 594 ntTSL 3 BASIC24.34■■□□□ 1.49
HTRA3P83110 EXOSC4-202ENST00000525936 606 ntTSL 3 BASIC24.34■■□□□ 1.49
HTRA3P83110 AC100839.1-201ENST00000559589 577 ntTSL 4 BASIC24.34■■□□□ 1.49
HTRA3P83110 APBA3-201ENST00000316757 2075 ntAPPRIS P1 TSL 1 (best) BASIC24.34■■□□□ 1.49
HTRA3P83110 SLC9A3-203ENST00000514375 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC24.34■■□□□ 1.49
HTRA3P83110 FAHD1-201ENST00000382666 1964 ntTSL 2 BASIC24.34■■□□□ 1.49
HTRA3P83110 SNCA-203ENST00000394986 1420 ntAPPRIS P1 TSL 1 (best) BASIC24.34■■□□□ 1.49
HTRA3P83110 NAE1-202ENST00000359087 1825 ntTSL 2 BASIC24.33■■□□□ 1.49
HTRA3P83110 MIF-AS1-201ENST00000406213 1476 ntTSL 1 (best) BASIC24.33■■□□□ 1.49
HTRA3P83110 ADAD2-202ENST00000315906 1995 ntAPPRIS ALT2 TSL 1 (best) BASIC24.33■■□□□ 1.49
HTRA3P83110 CDC16-204ENST00000360383 2211 ntAPPRIS P3 TSL 5 BASIC24.33■■□□□ 1.49
HTRA3P83110 D2HGDH-203ENST00000403782 2208 ntTSL 2 BASIC24.33■■□□□ 1.49
HTRA3P83110 TTC39A-203ENST00000371747 1876 ntTSL 2 BASIC24.33■■□□□ 1.49
HTRA3P83110 LINC01960-201ENST00000563759 1884 ntBASIC24.33■■□□□ 1.49
HTRA3P83110 GPR6-201ENST00000275169 1089 ntAPPRIS P1 BASIC24.33■■□□□ 1.49
HTRA3P83110 COX5A-201ENST00000322347 1268 ntAPPRIS P1 TSL 1 (best) BASIC24.33■■□□□ 1.49
HTRA3P83110 CCK-203ENST00000434608 747 ntAPPRIS P1 TSL 1 (best) BASIC24.33■■□□□ 1.49
HTRA3P83110 TTTY14-205ENST00000454875 544 ntTSL 2 BASIC24.33■■□□□ 1.49
HTRA3P83110 AC051649.1-201ENST00000509204 330 ntTSL 3 BASIC24.33■■□□□ 1.49
HTRA3P83110 AC138207.7-201ENST00000584499 668 ntTSL 5 BASIC24.33■■□□□ 1.49
HTRA3P83110 CIRBP-217ENST00000588230 1013 ntTSL 5 BASIC24.33■■□□□ 1.49
HTRA3P83110 AL158151.3-201ENST00000599172 696 ntTSL 5 BASIC24.33■■□□□ 1.49
HTRA3P83110 AP000550.4-202ENST00000639755 178 ntBASIC24.33■■□□□ 1.49
HTRA3P83110 MYC-208ENST00000641036 567 ntBASIC24.33■■□□□ 1.49
HTRA3P83110 SCARB2-219ENST00000639738 1517 ntTSL 5 BASIC24.33■■□□□ 1.49
HTRA3P83110 RBFA-202ENST00000306735 1407 ntAPPRIS P1 TSL 1 (best) BASIC24.33■■□□□ 1.49
HTRA3P83110 HSD11B1L-221ENST00000583928 1319 ntTSL 5 BASIC24.33■■□□□ 1.48
HTRA3P83110 TTBK2-207ENST00000567840 1961 ntTSL 1 (best) BASIC24.33■■□□□ 1.48
HTRA3P83110 CYP21A1P-202ENST00000354927 1481 ntBASIC24.32■■□□□ 1.48
HTRA3P83110 LGALS8-AS1-201ENST00000487567 1457 ntBASIC24.32■■□□□ 1.48
HTRA3P83110 FAM181A-204ENST00000557000 1652 ntAPPRIS P1 TSL 1 (best) BASIC24.32■■□□□ 1.48
HTRA3P83110 TREX2-205ENST00000370231 1255 ntAPPRIS P1 TSL 5 BASIC24.32■■□□□ 1.48
HTRA3P83110 SERP1-205ENST00000487153 657 ntTSL 4 BASIC24.32■■□□□ 1.48
HTRA3P83110 AP1S2-206ENST00000545766 576 ntTSL 1 (best) BASIC24.32■■□□□ 1.48
HTRA3P83110 AC005829.2-201ENST00000571422 1056 ntBASIC24.32■■□□□ 1.48
HTRA3P83110 PRR29-205ENST00000579184 1052 ntAPPRIS ALT2 TSL 2 BASIC24.32■■□□□ 1.48
HTRA3P83110 AC073195.1-201ENST00000607241 877 ntBASIC24.32■■□□□ 1.48
HTRA3P83110 PML-217ENST00000567543 1404 ntTSL 1 (best) BASIC24.32■■□□□ 1.48
HTRA3P83110 AC233992.2-201ENST00000531225 1596 ntAPPRIS P1 TSL 2 BASIC24.32■■□□□ 1.48
HTRA3P83110 AMZ2P1-201ENST00000397713 2259 ntTSL 1 (best) BASIC24.32■■□□□ 1.48
HTRA3P83110 RARA-204ENST00000394089 2024 ntAPPRIS P1 TSL 2 BASIC24.32■■□□□ 1.48
HTRA3P83110 ABHD12B-202ENST00000353130 1477 ntAPPRIS P3 TSL 1 (best) BASIC24.32■■□□□ 1.48
HTRA3P83110 EN1-201ENST00000295206 2457 ntAPPRIS P1 TSL 2 BASIC24.32■■□□□ 1.48
HTRA3P83110 FAAH-201ENST00000243167 2094 ntAPPRIS P1 TSL 1 (best) BASIC24.31■■□□□ 1.48
HTRA3P83110 CXCL16-203ENST00000574412 1668 ntAPPRIS P2 TSL 1 (best) BASIC24.31■■□□□ 1.48
HTRA3P83110 HDGFL2-210ENST00000621835 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC24.31■■□□□ 1.48
HTRA3P83110 CYP4V2-201ENST00000378802 2042 ntAPPRIS P1 TSL 1 (best) BASIC24.31■■□□□ 1.48
HTRA3P83110 PDLIM4-202ENST00000379018 1006 ntTSL 1 (best) BASIC24.31■■□□□ 1.48
HTRA3P83110 FAM99A-201ENST00000382167 1432 ntTSL 1 (best) BASIC24.31■■□□□ 1.48
HTRA3P83110 GPM6B-204ENST00000398361 1033 ntTSL 2 BASIC24.31■■□□□ 1.48
HTRA3P83110 HLA-DPB1-211ENST00000418931 1560 ntAPPRIS P2 BASIC24.31■■□□□ 1.48
HTRA3P83110 CDKN2A-205ENST00000479692 544 ntTSL 5 BASIC24.31■■□□□ 1.48
HTRA3P83110 AC016582.3-201ENST00000589653 561 ntTSL 4 BASIC24.31■■□□□ 1.48
HTRA3P83110 TBC1D9B-220ENST00000630103 303 ntTSL 5 BASIC24.31■■□□□ 1.48
HTRA3P83110 THAP4-204ENST00000407315 2367 ntAPPRIS P1 TSL 1 (best) BASIC24.31■■□□□ 1.48
HTRA3P83110 H1FNT-201ENST00000335017 1300 ntAPPRIS P1 BASIC24.31■■□□□ 1.48
HTRA3P83110 RAB40C-204ENST00000538492 2569 ntAPPRIS P1 TSL 2 BASIC24.31■■□□□ 1.48
HTRA3P83110 SUGCT-202ENST00000401647 1369 ntTSL 1 (best) BASIC24.3■■□□□ 1.48
HTRA3P83110 AGAP1-202ENST00000336665 5427 ntAPPRIS P3 TSL 1 (best) BASIC24.3■■□□□ 1.48
HTRA3P83110 ANG-201ENST00000336811 1222 ntAPPRIS P1 TSL 1 (best) BASIC24.3■■□□□ 1.48
HTRA3P83110 BX664615.1-201ENST00000443558 458 ntBASIC24.3■■□□□ 1.48
HTRA3P83110 WDR45-218ENST00000473974 1077 ntTSL 5 BASIC24.3■■□□□ 1.48
HTRA3P83110 AL121832.1-201ENST00000615180 677 ntTSL 3 BASIC24.3■■□□□ 1.48
HTRA3P83110 CLN6-221ENST00000637494 765 ntTSL 5 BASIC24.3■■□□□ 1.48
HTRA3P83110 TMEM9-201ENST00000367330 1959 ntAPPRIS P3 TSL 1 (best) BASIC24.3■■□□□ 1.48
HTRA3P83110 ZNF768-201ENST00000380412 2315 ntAPPRIS P2 TSL 1 (best) BASIC24.3■■□□□ 1.48
HTRA3P83110 AC074143.1-203ENST00000518227 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC24.3■■□□□ 1.48
HTRA3P83110 POU3F3-201ENST00000361360 3064 ntAPPRIS P1 BASIC24.29■■□□□ 1.48
HTRA3P83110 NDUFB10-201ENST00000268668 705 ntAPPRIS P1 TSL 1 (best) BASIC24.29■■□□□ 1.48
HTRA3P83110 CDHR4-201ENST00000343366 1188 ntTSL 1 (best) BASIC24.29■■□□□ 1.48
HTRA3P83110 UBE2J2-205ENST00000400930 1021 ntTSL 5 BASIC24.29■■□□□ 1.48
HTRA3P83110 AC068831.2-201ENST00000448987 367 ntTSL 2 BASIC24.29■■□□□ 1.48
HTRA3P83110 EGFEM1P-209ENST00000502332 728 ntTSL 3 BASIC24.29■■□□□ 1.48
HTRA3P83110 ZNF692-201ENST00000306601 1931 ntAPPRIS P3 TSL 1 (best) BASIC24.29■■□□□ 1.48
HTRA3P83110 LINC00511-201ENST00000453722 1716 ntTSL 2 BASIC24.29■■□□□ 1.48
HTRA3P83110 SCAMP3-202ENST00000355379 1537 ntTSL 1 (best) BASIC24.29■■□□□ 1.48
HTRA3P83110 SLC2A7-201ENST00000400906 1539 ntAPPRIS P1 TSL 1 (best) BASIC24.29■■□□□ 1.48
HTRA3P83110 AC133555.3-201ENST00000549950 1693 ntAPPRIS P5 TSL 5 BASIC24.28■■□□□ 1.48
HTRA3P83110 AC106782.1-201ENST00000550538 1693 ntAPPRIS P5 TSL 5 BASIC24.28■■□□□ 1.48
HTRA3P83110 MAD2L2-204ENST00000376667 872 ntAPPRIS P1 TSL 2 BASIC24.28■■□□□ 1.48
HTRA3P83110 AGBL5-AS1-201ENST00000444217 407 ntTSL 5 BASIC24.28■■□□□ 1.48
HTRA3P83110 AC009065.4-203ENST00000562838 535 ntTSL 2 BASIC24.28■■□□□ 1.48
HTRA3P83110 AC023511.2-201ENST00000618803 211 ntBASIC24.28■■□□□ 1.48
HTRA3P83110 FP565260.3-205ENST00000620481 816 ntTSL 5 BASIC24.28■■□□□ 1.48
HTRA3P83110 AC012313.10-201ENST00000623509 926 ntBASIC24.28■■□□□ 1.48
HTRA3P83110 SETD3-209ENST00000630307 1281 ntTSL 5 BASIC24.28■■□□□ 1.48
HTRA3P83110 ASAH1-251ENST00000637561 929 ntTSL 2 BASIC24.28■■□□□ 1.48
HTRA3P83110 RPS27A-211ENST00000639844 606 ntTSL 5 BASIC24.28■■□□□ 1.48
HTRA3P83110 NAPRT-204ENST00000449291 1965 ntAPPRIS P1 TSL 1 (best) BASIC24.28■■□□□ 1.48
HTRA3P83110 HOXC9-203ENST00000508190 1505 ntAPPRIS P1 TSL 3 BASIC24.28■■□□□ 1.48
HTRA3P83110 RFXANK-205ENST00000456252 1325 ntTSL 1 (best) BASIC24.28■■□□□ 1.48
HTRA3P83110 WDR45-207ENST00000376372 1639 ntAPPRIS P1 TSL 1 (best) BASIC24.28■■□□□ 1.48
HTRA3P83110 TIMP4-201ENST00000287814 1650 ntAPPRIS P1 TSL 1 (best) BASIC24.27■■□□□ 1.48
HTRA3P83110 AP003068.2-202ENST00000526623 1662 ntTSL 2 BASIC24.27■■□□□ 1.48
HTRA3P83110 MCRS1-202ENST00000357123 1428 ntTSL 1 (best) BASIC24.27■■□□□ 1.48
HTRA3P83110 DBNDD2-206ENST00000372720 1481 ntTSL 1 (best) BASIC24.27■■□□□ 1.48
HTRA3P83110 C9orf40-201ENST00000376854 2327 ntAPPRIS P1 TSL 1 (best) BASIC24.27■■□□□ 1.48
HTRA3P83110 DOC2A-218ENST00000616445 2065 ntAPPRIS P1 TSL 1 (best) BASIC24.27■■□□□ 1.48
Retrieved 100 of 98,524 protein–RNA pairs in 17.3 ms