Protein–RNA interactions for Protein: P04437

TCRA, T-cell receptor alpha chain V region CTL-L17, humanhuman

Predictions only

Length 139 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRAP04437 ABHD12B-201ENST00000337334 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
TCRAP04437 GFI1-201ENST00000294702 2784 ntAPPRIS P1 TSL 2 BASIC15.68■□□□□ 0.1
TCRAP04437 SLC25A39-201ENST00000225308 1607 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
TCRAP04437 ACVR1C-201ENST00000243349 8994 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
TCRAP04437 GPAA1-201ENST00000355091 2078 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
TCRAP04437 ISLR2-204ENST00000453268 2812 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
TCRAP04437 QKI-203ENST00000361752 9463 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
TCRAP04437 FFAR3-201ENST00000327809 1796 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
TCRAP04437 AVPR2-202ENST00000358927 1763 ntAPPRIS P1 TSL 5 BASIC15.67■□□□□ 0.1
TCRAP04437 GFER-201ENST00000248114 2345 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
TCRAP04437 CRMP1-201ENST00000324989 3146 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
TCRAP04437 SLC12A4-202ENST00000422611 4670 ntTSL 2 BASIC15.67■□□□□ 0.1
TCRAP04437 GADD45G-202ENST00000375769 977 ntTSL 2 BASIC15.67■□□□□ 0.1
TCRAP04437 OR2A1-AS1-204ENST00000470435 602 ntBASIC15.67■□□□□ 0.1
TCRAP04437 AL512631.2-201ENST00000604634 923 ntBASIC15.67■□□□□ 0.1
TCRAP04437 FAM217A-201ENST00000274673 2265 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
TCRAP04437 PRPS1-203ENST00000372428 1748 ntTSL 2 BASIC15.67■□□□□ 0.1
TCRAP04437 AQP11-201ENST00000313578 2152 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
TCRAP04437 MTSS1L-201ENST00000338779 4992 ntAPPRIS P2 TSL 1 (best) BASIC15.67■□□□□ 0.1
TCRAP04437 TRMT2A-201ENST00000252136 2964 ntAPPRIS P3 TSL 1 (best) BASIC15.67■□□□□ 0.1
TCRAP04437 BX005040.4-201ENST00000637145 1518 ntBASIC15.67■□□□□ 0.1
TCRAP04437 LINC00304-201ENST00000321214 2243 ntTSL 2 BASIC15.67■□□□□ 0.1
TCRAP04437 INSM2-201ENST00000307169 3013 ntAPPRIS P1 BASIC15.67■□□□□ 0.1
TCRAP04437 PXK-203ENST00000383715 1756 ntTSL 5 BASIC15.67■□□□□ 0.1
TCRAP04437 INPP5J-203ENST00000401755 1751 ntTSL 2 BASIC15.67■□□□□ 0.1
TCRAP04437 CCDC151-201ENST00000356392 2107 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
TCRAP04437 GALNS-201ENST00000268695 2363 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
TCRAP04437 GTF2IRD2B-208ENST00000619142 1932 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
TCRAP04437 CDAN1-201ENST00000356231 4637 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
TCRAP04437 PLBD1-201ENST00000240617 2426 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
TCRAP04437 KCNQ5-202ENST00000355194 6566 ntAPPRIS ALT1 TSL 5 BASIC15.66■□□□□ 0.1
TCRAP04437 KCNQ5-206ENST00000402622 6596 ntAPPRIS ALT2 TSL 5 BASIC15.66■□□□□ 0.1
TCRAP04437 RAC1-201ENST00000348035 2323 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
TCRAP04437 GTPBP3-222ENST00000600625 2493 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
TCRAP04437 PTPN11-202ENST00000392597 1876 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
TCRAP04437 DRAP1-201ENST00000312515 989 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
TCRAP04437 CCDC34-202ENST00000328697 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
TCRAP04437 TMEM54-201ENST00000329151 871 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
TCRAP04437 QDPR-206ENST00000508623 601 ntTSL 3 BASIC15.66■□□□□ 0.1
TCRAP04437 AL390816.2-201ENST00000554252 737 ntTSL 3 BASIC15.66■□□□□ 0.1
TCRAP04437 SAP25-203ENST00000614631 987 ntAPPRIS P2 TSL 2 BASIC15.66■□□□□ 0.1
TCRAP04437 ACP1-201ENST00000272065 1549 ntAPPRIS P5 TSL 1 (best) BASIC15.66■□□□□ 0.1
TCRAP04437 SLC25A22-216ENST00000531214 1790 ntAPPRIS P1 TSL 2 BASIC15.66■□□□□ 0.1
TCRAP04437 AP003356.1-202ENST00000517910 2770 ntTSL 2 BASIC15.66■□□□□ 0.1
TCRAP04437 AC009237.3-201ENST00000393279 1427 ntBASIC15.66■□□□□ 0.1
TCRAP04437 OR10C1-203ENST00000444197 1672 ntAPPRIS P1 BASIC15.66■□□□□ 0.1
TCRAP04437 CDH5-202ENST00000539168 1672 ntTSL 2 BASIC15.66■□□□□ 0.1
TCRAP04437 WIPF1-203ENST00000392546 2180 ntAPPRIS P2 TSL 5 BASIC15.66■□□□□ 0.1
TCRAP04437 ACHE-207ENST00000428317 2159 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
TCRAP04437 PON1-201ENST00000222381 2568 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
TCRAP04437 PACSIN3-201ENST00000298838 1843 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
TCRAP04437 AC011484.1-201ENST00000377652 1995 ntBASIC15.66■□□□□ 0.1
TCRAP04437 AGTR1-209ENST00000497524 2359 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
TCRAP04437 EML2-220ENST00000589876 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
TCRAP04437 ZNF331-214ENST00000511154 2120 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
TCRAP04437 ASCL2-201ENST00000331289 1852 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
TCRAP04437 CHRDL2-203ENST00000376332 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
TCRAP04437 FPGS-202ENST00000373228 1383 ntTSL 5 BASIC15.65■□□□□ 0.1
TCRAP04437 LRFN4-201ENST00000309602 2431 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
TCRAP04437 NAT8L-201ENST00000331662 5571 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
TCRAP04437 PACRGL-227ENST00000513459 1773 ntTSL 5 BASIC15.65■□□□□ 0.1
TCRAP04437 LGI2-201ENST00000382114 6428 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
TCRAP04437 CCT5-205ENST00000506600 1939 ntTSL 2 BASIC15.65■□□□□ 0.1
TCRAP04437 NFIL3-201ENST00000297689 2085 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
TCRAP04437 PCDHB12-202ENST00000622978 2093 ntTSL 2 BASIC15.65■□□□□ 0.1
TCRAP04437 STOX1-202ENST00000399162 935 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
TCRAP04437 STOX1-203ENST00000399165 1135 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
TCRAP04437 C16orf86-201ENST00000403458 1267 ntAPPRIS P2 TSL 1 (best) BASIC15.65■□□□□ 0.1
TCRAP04437 YJEFN3-201ENST00000436027 878 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
TCRAP04437 AL590128.2-201ENST00000442889 415 ntTSL 3 BASIC15.65■□□□□ 0.1
TCRAP04437 SHISA9-205ENST00000639941 1135 ntAPPRIS ALT2 TSL 5 BASIC15.65■□□□□ 0.1
TCRAP04437 NDOR1-204ENST00000458322 1829 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
TCRAP04437 SUMF1-202ENST00000383843 1447 ntTSL 2 BASIC15.65■□□□□ 0.1
TCRAP04437 UQCR11-203ENST00000591899 1324 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
TCRAP04437 ADRA1B-201ENST00000306675 2047 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
TCRAP04437 DNASE1L2-203ENST00000564065 2194 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
TCRAP04437 FBXW8-201ENST00000309909 2343 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
TCRAP04437 SERBP1-202ENST00000370990 1621 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
TCRAP04437 TYMP-202ENST00000395678 1614 ntAPPRIS P3 TSL 1 (best) BASIC15.65■□□□□ 0.1
TCRAP04437 ZNF280B-203ENST00000626650 5721 ntAPPRIS P1 TSL 2 BASIC15.64■□□□□ 0.09
TCRAP04437 ADRM1-204ENST00000491935 1530 ntAPPRIS P1 TSL 5 BASIC15.64■□□□□ 0.09
TCRAP04437 SEC11A-201ENST00000268220 1656 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
TCRAP04437 GALNT10-201ENST00000297107 5961 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
TCRAP04437 KREMEN2-202ENST00000319500 1882 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
TCRAP04437 SNX3-202ENST00000349379 890 ntTSL 2 BASIC15.64■□□□□ 0.09
TCRAP04437 CTAG1B-202ENST00000359887 998 ntTSL 2 BASIC15.64■□□□□ 0.09
TCRAP04437 SURF2-201ENST00000371964 842 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
TCRAP04437 TMEM44-203ENST00000381975 2197 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
TCRAP04437 HOXA11-AS1_1.1-201ENST00000613939 98 ntBASIC15.64■□□□□ 0.09
TCRAP04437 UPF1-201ENST00000262803 5348 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
TCRAP04437 SEC22C-207ENST00000423701 1458 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
TCRAP04437 LBX2-203ENST00000460508 1452 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
TCRAP04437 AC104581.1-201ENST00000324348 2852 ntAPPRIS P1 TSL 2 BASIC15.64■□□□□ 0.09
TCRAP04437 DGKZ-203ENST00000421244 2862 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
TCRAP04437 NTN5-201ENST00000270235 1836 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
TCRAP04437 EXOC3-AS1-202ENST00000623673 1663 ntBASIC15.63■□□□□ 0.09
TCRAP04437 YBX1-201ENST00000321358 1514 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
TCRAP04437 CSNK1D-203ENST00000392334 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC15.63■□□□□ 0.09
TCRAP04437 UBE2B-201ENST00000265339 2515 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
TCRAP04437 NAB2-201ENST00000300131 2711 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Retrieved 100 of 98,524 protein–RNA pairs in 21.7 ms