Protein–RNA interactions for Protein: O96005

CLPTM1, Cleft lip and palate transmembrane protein 1, humanhuman

Predictions only

Length 669 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLPTM1O96005 IVD-206ENST00000487418 1809 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CLPTM1O96005 CCDC106-205ENST00000588740 1404 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CLPTM1O96005 ECHDC1-214ENST00000474289 2443 ntAPPRIS P3 TSL 5 BASIC19.41■□□□□ 0.7
CLPTM1O96005 TFEB-211ENST00000420312 1996 ntTSL 5 BASIC19.41■□□□□ 0.7
CLPTM1O96005 PDXDC1-205ENST00000535621 2048 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
CLPTM1O96005 AC096677.1-201ENST00000454651 1516 ntTSL 2 BASIC19.41■□□□□ 0.7
CLPTM1O96005 TMEM11-201ENST00000317635 2095 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CLPTM1O96005 PABPN1-207ENST00000556821 1220 ntTSL 2 BASIC19.4■□□□□ 0.7
CLPTM1O96005 AC009086.3-201ENST00000623486 1008 ntBASIC19.4■□□□□ 0.7
CLPTM1O96005 DCTD-202ENST00000438320 1972 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CLPTM1O96005 TAL1-202ENST00000371884 4642 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CLPTM1O96005 PLPP2-202ENST00000327790 1397 ntTSL 5 BASIC19.4■□□□□ 0.7
CLPTM1O96005 AC009102.2-201ENST00000606772 1639 ntBASIC19.4■□□□□ 0.7
CLPTM1O96005 HOXA4-201ENST00000360046 1747 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
CLPTM1O96005 FUS-210ENST00000568685 1785 ntAPPRIS ALT2 TSL 5 BASIC19.39■□□□□ 0.7
CLPTM1O96005 NDOR1-204ENST00000458322 1829 ntTSL 1 (best) BASIC19.39■□□□□ 0.7
CLPTM1O96005 TDRKH-203ENST00000368824 2824 ntAPPRIS P2 TSL 1 (best) BASIC19.39■□□□□ 0.7
CLPTM1O96005 HDAC11-211ENST00000433119 2043 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
CLPTM1O96005 PCDHB12-202ENST00000622978 2093 ntTSL 2 BASIC19.39■□□□□ 0.69
CLPTM1O96005 SDHAP1-204ENST00000427415 559 ntTSL 4 BASIC19.39■□□□□ 0.69
CLPTM1O96005 AC019163.1-201ENST00000512634 610 ntTSL 2 BASIC19.39■□□□□ 0.69
CLPTM1O96005 SCARF1-202ENST00000348987 2619 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
CLPTM1O96005 PFKFB4-202ENST00000383734 1491 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
CLPTM1O96005 HSD11B1L-203ENST00000342970 1620 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
CLPTM1O96005 NR1D2-201ENST00000312521 5258 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
CLPTM1O96005 SPOCK2-209ENST00000536168 1824 ntAPPRIS ALT2 TSL 5 BASIC19.39■□□□□ 0.69
CLPTM1O96005 NAGK-229ENST00000613852 1801 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
CLPTM1O96005 SLC29A4-202ENST00000396872 5685 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
CLPTM1O96005 QKI-203ENST00000361752 9463 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
CLPTM1O96005 AC020907.5-201ENST00000624372 1936 ntBASIC19.39■□□□□ 0.69
CLPTM1O96005 DALRD3-201ENST00000313778 1968 ntTSL 2 BASIC19.39■□□□□ 0.69
CLPTM1O96005 ACBD4-204ENST00000431281 2026 ntTSL 5 BASIC19.39■□□□□ 0.69
CLPTM1O96005 PAQR4-203ENST00000572687 2251 ntTSL 2 BASIC19.39■□□□□ 0.69
CLPTM1O96005 ST3GAL3-206ENST00000351035 2377 ntTSL 5 BASIC19.39■□□□□ 0.69
CLPTM1O96005 AOC3-204ENST00000591562 2522 ntTSL 2 BASIC19.39■□□□□ 0.69
CLPTM1O96005 PGP-201ENST00000333503 2727 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
CLPTM1O96005 TBC1D4-201ENST00000377625 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
CLPTM1O96005 HDHD5-201ENST00000155674 1735 ntAPPRIS P3 TSL 1 (best) BASIC19.38■□□□□ 0.69
CLPTM1O96005 MMP11-201ENST00000215743 2291 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
CLPTM1O96005 IGFBP1-201ENST00000275525 1653 ntAPPRIS P2 TSL 1 (best) BASIC19.38■□□□□ 0.69
CLPTM1O96005 SNX32-201ENST00000308342 2003 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
CLPTM1O96005 AC138356.1-201ENST00000330539 2086 ntTSL 2 BASIC19.38■□□□□ 0.69
CLPTM1O96005 HM13-AS1-201ENST00000412178 489 ntTSL 3 BASIC19.38■□□□□ 0.69
CLPTM1O96005 TMEM125-201ENST00000432792 1850 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
CLPTM1O96005 LAYN-204ENST00000525126 1763 ntTSL 5 BASIC19.38■□□□□ 0.69
CLPTM1O96005 SENCR-201ENST00000526269 1298 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
CLPTM1O96005 MAF1-205ENST00000534585 1754 ntTSL 5 BASIC19.38■□□□□ 0.69
CLPTM1O96005 NAA30-202ENST00000554703 795 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
CLPTM1O96005 IRGQ-205ENST00000602269 2210 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
CLPTM1O96005 RBM26-202ENST00000438724 5152 ntAPPRIS ALT1 TSL 1 (best) BASIC19.38■□□□□ 0.69
CLPTM1O96005 EI24-201ENST00000278903 2455 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
CLPTM1O96005 GPAA1-201ENST00000355091 2078 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
CLPTM1O96005 MYC-201ENST00000259523 2042 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
CLPTM1O96005 TMEM51-203ENST00000400796 1842 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
CLPTM1O96005 MB21D2-201ENST00000392452 3368 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
CLPTM1O96005 AC009014.1-201ENST00000607574 1667 ntAPPRIS P1 BASIC19.37■□□□□ 0.69
CLPTM1O96005 PLPP1-202ENST00000307259 1597 ntAPPRIS ALT1 TSL 1 (best) BASIC19.37■□□□□ 0.69
CLPTM1O96005 AC074143.1-203ENST00000518227 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
CLPTM1O96005 ERLIN1-203ENST00000421367 5792 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
CLPTM1O96005 MAST4-205ENST00000406039 717 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
CLPTM1O96005 SSR2-210ENST00000480567 895 ntAPPRIS P1 TSL 2 BASIC19.37■□□□□ 0.69
CLPTM1O96005 HOXA11-AS1_1.1-201ENST00000613939 98 ntBASIC19.37■□□□□ 0.69
CLPTM1O96005 AC093762.1-201ENST00000641981 837 ntAPPRIS P1 BASIC19.37■□□□□ 0.69
CLPTM1O96005 CASR-204ENST00000638421 5088 ntAPPRIS P1 TSL 5 BASIC19.37■□□□□ 0.69
CLPTM1O96005 RNPEPL1-201ENST00000270357 5658 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
CLPTM1O96005 TMEM44-203ENST00000381975 2197 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
CLPTM1O96005 MTA1-207ENST00000435036 2888 ntTSL 5 BASIC19.37■□□□□ 0.69
CLPTM1O96005 DIP2A-203ENST00000435722 2760 ntTSL 2 BASIC19.37■□□□□ 0.69
CLPTM1O96005 WDR90-201ENST00000293879 5488 ntAPPRIS P2 TSL 5 BASIC19.37■□□□□ 0.69
CLPTM1O96005 CBWD5-207ENST00000382405 1791 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
CLPTM1O96005 SNRNP70-201ENST00000221448 1603 ntTSL 2 BASIC19.36■□□□□ 0.69
CLPTM1O96005 SNUPN-207ENST00000567134 1641 ntAPPRIS P1 TSL 5 BASIC19.36■□□□□ 0.69
CLPTM1O96005 AHRR-204ENST00000506456 2350 ntTSL 2 BASIC19.36■□□□□ 0.69
CLPTM1O96005 LINC00304-201ENST00000321214 2243 ntTSL 2 BASIC19.36■□□□□ 0.69
CLPTM1O96005 TPCN2-201ENST00000294309 2931 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
CLPTM1O96005 TULP1-201ENST00000229771 2162 ntAPPRIS P2 TSL 1 (best) BASIC19.36■□□□□ 0.69
CLPTM1O96005 EWSR1-208ENST00000414183 2189 ntAPPRIS P4 TSL 2 BASIC19.36■□□□□ 0.69
CLPTM1O96005 LTBP4-201ENST00000204005 5032 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
CLPTM1O96005 LINC01116-201ENST00000295549 1407 ntTSL 2 BASIC19.36■□□□□ 0.69
CLPTM1O96005 RCE1-202ENST00000524506 1379 ntTSL 5 BASIC19.36■□□□□ 0.69
CLPTM1O96005 ZNF394-203ENST00000426306 2017 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
CLPTM1O96005 PLPPR2-208ENST00000591608 2552 ntAPPRIS ALT2 TSL 2 BASIC19.36■□□□□ 0.69
CLPTM1O96005 C16orf95-201ENST00000253461 953 ntAPPRIS P3 TSL 1 (best) BASIC19.36■□□□□ 0.69
CLPTM1O96005 HMCES-201ENST00000383463 2515 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
CLPTM1O96005 DUSP26-201ENST00000256261 1835 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
CLPTM1O96005 TTC19-201ENST00000261647 3002 ntAPPRIS P2 TSL 1 (best) BASIC19.36■□□□□ 0.69
CLPTM1O96005 FAM213A-202ENST00000372185 1723 ntTSL 2 BASIC19.36■□□□□ 0.69
CLPTM1O96005 GLS-202ENST00000338435 4475 ntAPPRIS ALT1 TSL 1 (best) BASIC19.36■□□□□ 0.69
CLPTM1O96005 SERBP1-201ENST00000361219 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC19.36■□□□□ 0.69
CLPTM1O96005 NBL1-209ENST00000548815 1953 ntAPPRIS P3 TSL 3 BASIC19.35■□□□□ 0.69
CLPTM1O96005 DNLZ-202ENST00000371739 2934 ntTSL 5 BASIC19.35■□□□□ 0.69
CLPTM1O96005 GLRB-207ENST00000541722 2765 ntTSL 5 BASIC19.35■□□□□ 0.69
CLPTM1O96005 LAPTM4B-204ENST00000619747 2758 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
CLPTM1O96005 HOXA13-201ENST00000222753 5030 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
CLPTM1O96005 AL390879.2-201ENST00000424306 2222 ntTSL 2 BASIC19.35■□□□□ 0.69
CLPTM1O96005 HTATIP2-204ENST00000451739 1748 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
CLPTM1O96005 PABPC1L-202ENST00000217074 1263 ntTSL 5 BASIC19.35■□□□□ 0.69
CLPTM1O96005 WDR4-202ENST00000398208 2122 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
CLPTM1O96005 FAM213B-201ENST00000378424 2765 ntAPPRIS ALT2 TSL 5 BASIC19.35■□□□□ 0.69
CLPTM1O96005 MAPK15-201ENST00000338033 1961 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 30.4 ms