Protein–RNA interactions for Protein: A6NGU7

LINC01546, Putative uncharacterized protein encoded by LINC01546, humanhuman

Predictions only

Length 62 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01546A6NGU7 FAR2P2-204ENST00000424873 2070 ntTSL 2 BASIC14.61□□□□□ -0.07
LINC01546A6NGU7 SNAI3-AS1-202ENST00000563475 2081 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
LINC01546A6NGU7 FBXL16-203ENST00000562563 2257 ntTSL 2 BASIC14.61□□□□□ -0.07
LINC01546A6NGU7 MGEA5-205ENST00000439817 5043 ntTSL 5 BASIC14.6□□□□□ -0.07
LINC01546A6NGU7 IFRD2-202ENST00000417626 2109 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
LINC01546A6NGU7 H19-201ENST00000411754 1788 ntTSL 5 BASIC14.6□□□□□ -0.07
LINC01546A6NGU7 RUSC1-AS1-203ENST00000450199 1636 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
LINC01546A6NGU7 PUF60-202ENST00000349157 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
LINC01546A6NGU7 SORBS3-221ENST00000523965 2028 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
LINC01546A6NGU7 KAT5-203ENST00000377046 2237 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
LINC01546A6NGU7 WNT7B-204ENST00000410089 2202 ntTSL 5 BASIC14.6□□□□□ -0.07
LINC01546A6NGU7 ECHDC1-214ENST00000474289 2443 ntAPPRIS P3 TSL 5 BASIC14.6□□□□□ -0.07
LINC01546A6NGU7 TCERG1L-201ENST00000368642 2618 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
LINC01546A6NGU7 RARRES2P2-201ENST00000394842 485 ntBASIC14.6□□□□□ -0.07
LINC01546A6NGU7 WBP1-203ENST00000409737 1110 ntAPPRIS ALT1 TSL 5 BASIC14.6□□□□□ -0.07
LINC01546A6NGU7 AL355490.1-201ENST00000445808 805 ntTSL 3 BASIC14.6□□□□□ -0.07
LINC01546A6NGU7 AC010980.1-201ENST00000587192 1142 ntBASIC14.6□□□□□ -0.07
LINC01546A6NGU7 SNX5-219ENST00000606602 885 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
LINC01546A6NGU7 pRNA.6-201ENST00000610482 90 ntBASIC14.6□□□□□ -0.07
LINC01546A6NGU7 pRNA.5-201ENST00000612139 90 ntBASIC14.6□□□□□ -0.07
LINC01546A6NGU7 pRNA.11-201ENST00000618423 90 ntBASIC14.6□□□□□ -0.07
LINC01546A6NGU7 pRNA.13-201ENST00000619112 90 ntBASIC14.6□□□□□ -0.07
LINC01546A6NGU7 TH-203ENST00000352909 1889 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
LINC01546A6NGU7 TH-205ENST00000381175 1898 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
LINC01546A6NGU7 PLCXD1-202ENST00000381663 1863 ntAPPRIS P2 TSL 5 BASIC14.6□□□□□ -0.07
LINC01546A6NGU7 SPHK1-207ENST00000590959 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
LINC01546A6NGU7 UBXN11-201ENST00000314675 2254 ntAPPRIS ALT2 TSL 2 BASIC14.6□□□□□ -0.07
LINC01546A6NGU7 COL9A3-201ENST00000343916 2485 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
LINC01546A6NGU7 CERS5-203ENST00000422340 2855 ntAPPRIS ALT2 TSL 2 BASIC14.6□□□□□ -0.07
LINC01546A6NGU7 NRXN2-203ENST00000377551 6373 ntAPPRIS P3 TSL 1 (best) BASIC14.6□□□□□ -0.07
LINC01546A6NGU7 UBE2F-205ENST00000414443 2100 ntTSL 2 BASIC14.6□□□□□ -0.07
LINC01546A6NGU7 PCBP3-203ENST00000400308 1911 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
LINC01546A6NGU7 AL035252.2-201ENST00000454676 3168 ntTSL 2 BASIC14.6□□□□□ -0.07
LINC01546A6NGU7 CNNM4-201ENST00000377075 4800 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
LINC01546A6NGU7 REEP2-202ENST00000378339 2170 ntAPPRIS ALT1 TSL 1 (best) BASIC14.6□□□□□ -0.07
LINC01546A6NGU7 OAS3-205ENST00000548514 1392 ntTSL 2 BASIC14.6□□□□□ -0.07
LINC01546A6NGU7 COL15A1-205ENST00000610452 5422 ntAPPRIS ALT2 TSL 5 BASIC14.59□□□□□ -0.07
LINC01546A6NGU7 PARD3-214ENST00000545693 5962 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
LINC01546A6NGU7 KSR1-205ENST00000509603 2731 ntAPPRIS ALT2 TSL 5 BASIC14.59□□□□□ -0.07
LINC01546A6NGU7 CASP9-210ENST00000546424 4463 ntAPPRIS ALT2 TSL 5 BASIC14.59□□□□□ -0.07
LINC01546A6NGU7 ABCB9-202ENST00000344275 2394 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
LINC01546A6NGU7 CRHR1-214ENST00000619154 2370 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
LINC01546A6NGU7 GNB2-209ENST00000436220 1479 ntTSL 5 BASIC14.59□□□□□ -0.07
LINC01546A6NGU7 CTSH-201ENST00000220166 2190 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
LINC01546A6NGU7 ISYNA1-201ENST00000338128 2420 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
LINC01546A6NGU7 RASGRP2-204ENST00000377487 642 ntTSL 2 BASIC14.59□□□□□ -0.07
LINC01546A6NGU7 BAD-203ENST00000394532 1157 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
LINC01546A6NGU7 UBE2E2-203ENST00000425792 1248 ntAPPRIS P1 TSL 2 BASIC14.59□□□□□ -0.07
LINC01546A6NGU7 AC090587.2-201ENST00000430222 527 ntTSL 2 BASIC14.59□□□□□ -0.07
LINC01546A6NGU7 CALM1-202ENST00000447653 1104 ntAPPRIS ALT1 TSL 2 BASIC14.59□□□□□ -0.07
LINC01546A6NGU7 SERGEF-219ENST00000532265 1124 ntTSL 2 BASIC14.59□□□□□ -0.07
LINC01546A6NGU7 CD8A-202ENST00000352580 1977 ntAPPRIS ALT2 TSL 2 BASIC14.59□□□□□ -0.07
LINC01546A6NGU7 CPEB1-214ENST00000617522 2220 ntTSL 5 BASIC14.59□□□□□ -0.07
LINC01546A6NGU7 SNUPN-201ENST00000308588 1513 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
LINC01546A6NGU7 TBX1-203ENST00000359500 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
LINC01546A6NGU7 PGR-201ENST00000263463 2496 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
LINC01546A6NGU7 LEMD2-201ENST00000293760 2958 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
LINC01546A6NGU7 NGLY1-204ENST00000396649 2024 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
LINC01546A6NGU7 FBXO24-201ENST00000241071 2276 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
LINC01546A6NGU7 PAFAH1B2-202ENST00000419197 2517 ntTSL 2 BASIC14.59□□□□□ -0.07
LINC01546A6NGU7 DPF1-209ENST00000456296 1562 ntAPPRIS P1 TSL 5 BASIC14.59□□□□□ -0.07
LINC01546A6NGU7 AGTR1-201ENST00000349243 2356 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
LINC01546A6NGU7 C14orf79-202ENST00000547315 2370 ntAPPRIS P2 TSL 1 (best) BASIC14.59□□□□□ -0.07
LINC01546A6NGU7 DEDD2-204ENST00000595337 1894 ntAPPRIS P3 TSL 3 BASIC14.59□□□□□ -0.07
LINC01546A6NGU7 B3GALT4-204ENST00000451237 1694 ntAPPRIS P1 BASIC14.58□□□□□ -0.07
LINC01546A6NGU7 PPCS-203ENST00000372561 1431 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
LINC01546A6NGU7 HOMER3-203ENST00000433218 1418 ntAPPRIS ALT1 TSL 5 BASIC14.58□□□□□ -0.07
LINC01546A6NGU7 AC005082.1-201ENST00000413042 2259 ntBASIC14.58□□□□□ -0.08
LINC01546A6NGU7 LSR-214ENST00000621372 2274 ntAPPRIS P4 TSL 1 (best) BASIC14.58□□□□□ -0.08
LINC01546A6NGU7 TUSC3-203ENST00000503731 1498 ntAPPRIS P4 TSL 1 (best) BASIC14.58□□□□□ -0.08
LINC01546A6NGU7 LINC00482-201ENST00000332012 2023 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
LINC01546A6NGU7 LDHD-201ENST00000300051 2067 ntAPPRIS P3 TSL 1 (best) BASIC14.58□□□□□ -0.08
LINC01546A6NGU7 ZNF282-203ENST00000479907 1815 ntTSL 2 BASIC14.58□□□□□ -0.08
LINC01546A6NGU7 AL138781.2-201ENST00000617896 1843 ntBASIC14.58□□□□□ -0.08
LINC01546A6NGU7 CDKN2A-208ENST00000498124 880 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
LINC01546A6NGU7 CIDEB-202ENST00000336557 2409 ntAPPRIS P1 TSL 2 BASIC14.58□□□□□ -0.08
LINC01546A6NGU7 MSLN-202ENST00000545450 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.08
LINC01546A6NGU7 PLPPR2-208ENST00000591608 2552 ntAPPRIS ALT2 TSL 2 BASIC14.58□□□□□ -0.08
LINC01546A6NGU7 DMRT2-204ENST00000382251 2292 ntAPPRIS P1 TSL 5 BASIC14.58□□□□□ -0.08
LINC01546A6NGU7 MKRN1-208ENST00000474576 1661 ntTSL 5 BASIC14.58□□□□□ -0.08
LINC01546A6NGU7 TRABD-201ENST00000303434 2329 ntAPPRIS P3 TSL 1 (best) BASIC14.58□□□□□ -0.08
LINC01546A6NGU7 FBLN7-202ENST00000331203 2301 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
LINC01546A6NGU7 PDLIM5-205ENST00000380180 2020 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
LINC01546A6NGU7 TOR1A-201ENST00000351698 2076 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
LINC01546A6NGU7 TREX1-205ENST00000625293 1783 ntBASIC14.57□□□□□ -0.08
LINC01546A6NGU7 HERPUD2-201ENST00000311350 2474 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
LINC01546A6NGU7 USP21-201ENST00000289865 2195 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
LINC01546A6NGU7 NSMF-203ENST00000371472 1852 ntAPPRIS P3 TSL 2 BASIC14.57□□□□□ -0.08
LINC01546A6NGU7 LRWD1-201ENST00000292616 2215 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
LINC01546A6NGU7 BOD1-202ENST00000311086 1562 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
LINC01546A6NGU7 TH-206ENST00000381178 1910 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
LINC01546A6NGU7 AC107959.1-202ENST00000502083 1945 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
LINC01546A6NGU7 PHF2-201ENST00000359246 5569 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
LINC01546A6NGU7 PHPT1-201ENST00000247665 890 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
LINC01546A6NGU7 ST20-MTHFS-201ENST00000479961 859 ntAPPRIS P1 TSL 3 BASIC14.57□□□□□ -0.08
LINC01546A6NGU7 ARFIP2-205ENST00000525235 852 ntTSL 2 BASIC14.57□□□□□ -0.08
LINC01546A6NGU7 RHOA-202ENST00000418115 2031 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
LINC01546A6NGU7 CBWD3-202ENST00000377342 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
LINC01546A6NGU7 NDUFB2-212ENST00000476279 1666 ntAPPRIS P1 TSL 5 BASIC14.57□□□□□ -0.08
LINC01546A6NGU7 SMUG1-215ENST00000508394 1697 ntAPPRIS P1 TSL 2 BASIC14.57□□□□□ -0.08
Retrieved 100 of 98,524 protein–RNA pairs in 31.2 ms