Protein–RNA interactions for Protein: A0A087WT02

TRAV9-2, T-cell receptor alpha variable 9-2 (Fragment), humanhuman

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV9-2A0A087WT02 ANHX-202ENST00000545940 3452 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
TRAV9-2A0A087WT02 KRT9-201ENST00000246662 2290 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
TRAV9-2A0A087WT02 LONP1-201ENST00000360614 3236 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
TRAV9-2A0A087WT02 WRNIP1-202ENST00000380769 3239 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
TRAV9-2A0A087WT02 TMEM11-201ENST00000317635 2095 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
TRAV9-2A0A087WT02 SLC16A5-201ENST00000329783 1934 ntAPPRIS P2 TSL 1 (best) BASIC15.29■□□□□ 0.04
TRAV9-2A0A087WT02 HSF2BP-201ENST00000291560 1899 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
TRAV9-2A0A087WT02 DTNBP1-201ENST00000338950 1880 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
TRAV9-2A0A087WT02 CACNB1-203ENST00000394310 1753 ntAPPRIS ALT1 TSL 1 (best) BASIC15.29■□□□□ 0.04
TRAV9-2A0A087WT02 TMEM178A-201ENST00000281961 1662 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
TRAV9-2A0A087WT02 SPNS1-201ENST00000311008 2208 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
TRAV9-2A0A087WT02 TLX3-201ENST00000296921 1493 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
TRAV9-2A0A087WT02 TPCN2-201ENST00000294309 2931 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
TRAV9-2A0A087WT02 RHOU-201ENST00000366691 4372 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
TRAV9-2A0A087WT02 CYP1B1-207ENST00000614273 2174 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
TRAV9-2A0A087WT02 SUMF1-202ENST00000383843 1447 ntTSL 2 BASIC15.28■□□□□ 0.04
TRAV9-2A0A087WT02 AC007040.2-201ENST00000606025 4170 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
TRAV9-2A0A087WT02 C16orf95-201ENST00000253461 953 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
TRAV9-2A0A087WT02 AC096631.2-201ENST00000436136 790 ntBASIC15.28■□□□□ 0.04
TRAV9-2A0A087WT02 AC019163.1-201ENST00000512634 610 ntTSL 2 BASIC15.28■□□□□ 0.04
TRAV9-2A0A087WT02 TYROBP-203ENST00000544690 522 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
TRAV9-2A0A087WT02 NAA30-202ENST00000554703 795 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
TRAV9-2A0A087WT02 ZNF264-206ENST00000600531 774 ntTSL 2 BASIC15.28■□□□□ 0.04
TRAV9-2A0A087WT02 OTOP1-201ENST00000296358 1864 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
TRAV9-2A0A087WT02 SOX18-201ENST00000340356 1864 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
TRAV9-2A0A087WT02 FDFT1-210ENST00000525954 1890 ntTSL 2 BASIC15.28■□□□□ 0.04
TRAV9-2A0A087WT02 AHRR-204ENST00000506456 2350 ntTSL 2 BASIC15.28■□□□□ 0.04
TRAV9-2A0A087WT02 CACNA1A-247ENST00000637769 8648 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
TRAV9-2A0A087WT02 AATK-203ENST00000417379 5081 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
TRAV9-2A0A087WT02 AC007326.4-201ENST00000638240 1669 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
TRAV9-2A0A087WT02 SOCS3-201ENST00000330871 2734 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
TRAV9-2A0A087WT02 HNRNPAB-201ENST00000355836 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
TRAV9-2A0A087WT02 ASCC1-204ENST00000394915 1510 ntTSL 5 BASIC15.27■□□□□ 0.04
TRAV9-2A0A087WT02 TSNARE1-208ENST00000524325 1963 ntAPPRIS P3 TSL 2 BASIC15.27■□□□□ 0.04
TRAV9-2A0A087WT02 RASSF1-203ENST00000359365 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC15.27■□□□□ 0.04
TRAV9-2A0A087WT02 MYO1D-213ENST00000583621 1916 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
TRAV9-2A0A087WT02 TLE3-226ENST00000627388 5742 ntAPPRIS ALT1 TSL 5 BASIC15.27■□□□□ 0.04
TRAV9-2A0A087WT02 TRAK1-209ENST00000487159 5536 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.04
TRAV9-2A0A087WT02 C1QTNF1-207ENST00000580454 1396 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.04
TRAV9-2A0A087WT02 ANKRD9-201ENST00000286918 6727 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
TRAV9-2A0A087WT02 SLC35C1-202ENST00000442528 1756 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
TRAV9-2A0A087WT02 ITGB5-201ENST00000296181 4372 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
TRAV9-2A0A087WT02 ADORA2B-201ENST00000304222 1735 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
TRAV9-2A0A087WT02 DALRD3-206ENST00000441576 1706 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
TRAV9-2A0A087WT02 RASSF1-AS1-201ENST00000629828 790 ntBASIC15.27■□□□□ 0.04
TRAV9-2A0A087WT02 GRAMD1B-217ENST00000640939 1212 ntTSL 5 BASIC15.27■□□□□ 0.04
TRAV9-2A0A087WT02 AC093762.1-201ENST00000641981 837 ntAPPRIS P1 BASIC15.27■□□□□ 0.04
TRAV9-2A0A087WT02 TTC12-202ENST00000393020 2541 ntTSL 5 BASIC15.27■□□□□ 0.03
TRAV9-2A0A087WT02 SAMD8-202ENST00000372690 1654 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
TRAV9-2A0A087WT02 CHST11-205ENST00000549260 5696 ntAPPRIS ALT1 TSL 1 (best) BASIC15.27■□□□□ 0.03
TRAV9-2A0A087WT02 PCED1A-202ENST00000360652 2016 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
TRAV9-2A0A087WT02 PSPC1-201ENST00000338910 2407 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
TRAV9-2A0A087WT02 FUT5-202ENST00000588525 1988 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
TRAV9-2A0A087WT02 GJB6-204ENST00000400066 1927 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
TRAV9-2A0A087WT02 CCT5-205ENST00000506600 1939 ntTSL 2 BASIC15.27■□□□□ 0.03
TRAV9-2A0A087WT02 C17orf82-201ENST00000623772 1530 ntBASIC15.27■□□□□ 0.03
TRAV9-2A0A087WT02 ACAP3-201ENST00000353662 2280 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
TRAV9-2A0A087WT02 LYN-202ENST00000519728 2297 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.03
TRAV9-2A0A087WT02 UBE3C-201ENST00000348165 5229 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
TRAV9-2A0A087WT02 LMTK2-201ENST00000297293 8946 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
TRAV9-2A0A087WT02 RAP1B-207ENST00000450214 1466 ntTSL 2 BASIC15.27■□□□□ 0.03
TRAV9-2A0A087WT02 SYDE2-202ENST00000341460 5512 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.03
TRAV9-2A0A087WT02 RNF38-202ENST00000350199 5104 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.03
TRAV9-2A0A087WT02 EWSR1-208ENST00000414183 2189 ntAPPRIS P4 TSL 2 BASIC15.26■□□□□ 0.03
TRAV9-2A0A087WT02 PCDHA2-203ENST00000526136 5254 ntAPPRIS P2 TSL 1 (best) BASIC15.26■□□□□ 0.03
TRAV9-2A0A087WT02 DIP2A-203ENST00000435722 2760 ntTSL 2 BASIC15.26■□□□□ 0.03
TRAV9-2A0A087WT02 IRX4-207ENST00000613726 2403 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
TRAV9-2A0A087WT02 FP325331.1-202ENST00000623531 1380 ntBASIC15.26■□□□□ 0.03
TRAV9-2A0A087WT02 KLHDC10-201ENST00000335420 6437 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
TRAV9-2A0A087WT02 USP25-204ENST00000400183 5341 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
TRAV9-2A0A087WT02 LRRC25-202ENST00000595840 1924 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
TRAV9-2A0A087WT02 CARD19-201ENST00000375464 855 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
TRAV9-2A0A087WT02 CCDC189-211ENST00000545825 1046 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
TRAV9-2A0A087WT02 AL138724.1-201ENST00000606771 1088 ntBASIC15.26■□□□□ 0.03
TRAV9-2A0A087WT02 LINC01632-201ENST00000615763 496 ntTSL 3 BASIC15.26■□□□□ 0.03
TRAV9-2A0A087WT02 NLGN2-204ENST00000575301 4374 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
TRAV9-2A0A087WT02 PSKH1-202ENST00000570631 1509 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
TRAV9-2A0A087WT02 RBMS1-205ENST00000409972 1815 ntTSL 5 BASIC15.26■□□□□ 0.03
TRAV9-2A0A087WT02 NAPEPLD-208ENST00000427257 1822 ntAPPRIS P1 TSL 2 BASIC15.26■□□□□ 0.03
TRAV9-2A0A087WT02 PCDHAC2-201ENST00000289269 5963 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
TRAV9-2A0A087WT02 PLEKHB1-204ENST00000398494 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC15.26■□□□□ 0.03
TRAV9-2A0A087WT02 PFKFB4-202ENST00000383734 1491 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
TRAV9-2A0A087WT02 RNF180-201ENST00000296615 1727 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
TRAV9-2A0A087WT02 SUSD2-201ENST00000358321 3404 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
TRAV9-2A0A087WT02 AC116562.4-201ENST00000641316 2276 ntBASIC15.26■□□□□ 0.03
TRAV9-2A0A087WT02 TPST2-202ENST00000398110 1968 ntAPPRIS P1 TSL 2 BASIC15.25■□□□□ 0.03
TRAV9-2A0A087WT02 SLC35F3-201ENST00000366617 2762 ntAPPRIS ALT1 TSL 1 (best) BASIC15.25■□□□□ 0.03
TRAV9-2A0A087WT02 MAP7D2-203ENST00000443379 2476 ntAPPRIS ALT2 TSL 2 BASIC15.25■□□□□ 0.03
TRAV9-2A0A087WT02 PQLC2-201ENST00000375153 2153 ntAPPRIS P1 TSL 2 BASIC15.25■□□□□ 0.03
TRAV9-2A0A087WT02 SNRNP70-201ENST00000221448 1603 ntTSL 2 BASIC15.25■□□□□ 0.03
TRAV9-2A0A087WT02 CNTNAP3B-203ENST00000377561 5379 ntAPPRIS P2 TSL 1 (best) BASIC15.25■□□□□ 0.03
TRAV9-2A0A087WT02 PTRH1-204ENST00000419060 2692 ntAPPRIS P1 TSL 2 BASIC15.25■□□□□ 0.03
TRAV9-2A0A087WT02 RILPL2-201ENST00000280571 6141 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
TRAV9-2A0A087WT02 KIF22-201ENST00000160827 2113 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
TRAV9-2A0A087WT02 SP3-208ENST00000640958 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
TRAV9-2A0A087WT02 NFKBIE-204ENST00000619360 2327 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
TRAV9-2A0A087WT02 UNC93B3-201ENST00000308076 687 ntBASIC15.25■□□□□ 0.03
TRAV9-2A0A087WT02 AL357078.1-201ENST00000448344 310 ntTSL 4 BASIC15.25■□□□□ 0.03
TRAV9-2A0A087WT02 SMIM29-205ENST00000468145 903 ntTSL 2 BASIC15.25■□□□□ 0.03
TRAV9-2A0A087WT02 SMIM29-207ENST00000481533 1053 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 24.4 ms