Protein–RNA interactions for Protein: A0A075B6U4

TRAV7, T-cell receptor alpha variable 7 (Fragment), humanhuman

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV7A0A075B6U4 ULK3-201ENST00000440863 2623 ntAPPRIS P3 TSL 2 BASIC12.24□□□□□ -0.45
TRAV7A0A075B6U4 PRKCB-202ENST00000321728 2689 ntAPPRIS ALT1 TSL 1 (best) BASIC12.24□□□□□ -0.45
TRAV7A0A075B6U4 PCDHA8-202ENST00000531613 5260 ntAPPRIS P2 TSL 1 (best) BASIC12.24□□□□□ -0.45
TRAV7A0A075B6U4 KRT5-201ENST00000252242 2531 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
TRAV7A0A075B6U4 NOV-201ENST00000259526 2522 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
TRAV7A0A075B6U4 CENPU-201ENST00000281453 1998 ntAPPRIS P2 TSL 1 (best) BASIC12.24□□□□□ -0.45
TRAV7A0A075B6U4 TRH-201ENST00000302649 1978 ntAPPRIS P2 TSL 1 (best) BASIC12.24□□□□□ -0.45
TRAV7A0A075B6U4 MYO1B-204ENST00000392318 5082 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
TRAV7A0A075B6U4 DOCK5-202ENST00000410074 786 ntTSL 2 BASIC12.24□□□□□ -0.45
TRAV7A0A075B6U4 NKX1-1-201ENST00000422806 1236 ntAPPRIS P1 TSL 5 BASIC12.24□□□□□ -0.45
TRAV7A0A075B6U4 ADAP1-205ENST00000449296 2093 ntTSL 2 BASIC12.24□□□□□ -0.45
TRAV7A0A075B6U4 SNX21-212ENST00000491381 1607 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
TRAV7A0A075B6U4 FER1L4-210ENST00000615531 5998 ntBASIC12.24□□□□□ -0.45
TRAV7A0A075B6U4 AC020907.5-201ENST00000624372 1936 ntBASIC12.24□□□□□ -0.45
TRAV7A0A075B6U4 DYM-201ENST00000269445 5049 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
TRAV7A0A075B6U4 RAB23-202ENST00000468148 4837 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
TRAV7A0A075B6U4 PPP1R18-201ENST00000274853 4599 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
TRAV7A0A075B6U4 PPP1R18-205ENST00000615527 4597 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
TRAV7A0A075B6U4 NSMAF-202ENST00000427130 3371 ntTSL 2 BASIC12.24□□□□□ -0.45
TRAV7A0A075B6U4 QRICH1-201ENST00000357496 3083 ntAPPRIS P1 TSL 2 BASIC12.24□□□□□ -0.45
TRAV7A0A075B6U4 RHOT1-202ENST00000354266 2919 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
TRAV7A0A075B6U4 AAED1-201ENST00000375234 2863 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
TRAV7A0A075B6U4 CDKN1B-201ENST00000228872 2657 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
TRAV7A0A075B6U4 CHPF-203ENST00000535926 2634 ntTSL 2 BASIC12.24□□□□□ -0.45
TRAV7A0A075B6U4 ZDHHC8P1-204ENST00000433168 2309 ntTSL 2 BASIC12.23□□□□□ -0.45
TRAV7A0A075B6U4 SGO1-209ENST00000442720 2266 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
TRAV7A0A075B6U4 ITSN2-201ENST00000355123 6300 ntAPPRIS P4 TSL 1 (best) BASIC12.23□□□□□ -0.45
TRAV7A0A075B6U4 HOXB1-201ENST00000239174 2020 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
TRAV7A0A075B6U4 CCT7-215ENST00000539919 2031 ntTSL 2 BASIC12.23□□□□□ -0.45
TRAV7A0A075B6U4 PRKAA1-202ENST00000354209 1918 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
TRAV7A0A075B6U4 RBMS1-205ENST00000409972 1815 ntTSL 5 BASIC12.23□□□□□ -0.45
TRAV7A0A075B6U4 HPCAL1-201ENST00000307845 1751 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
TRAV7A0A075B6U4 ADAMTS13-206ENST00000371929 4934 ntAPPRIS P4 TSL 1 (best) BASIC12.23□□□□□ -0.45
TRAV7A0A075B6U4 FAM222A-202ENST00000538780 3294 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
TRAV7A0A075B6U4 RBPJL-203ENST00000372743 1623 ntAPPRIS ALT1 TSL 1 (best) BASIC12.23□□□□□ -0.45
TRAV7A0A075B6U4 CCDC85B-201ENST00000312579 1524 ntAPPRIS P1 BASIC12.23□□□□□ -0.45
TRAV7A0A075B6U4 CCDC24-201ENST00000372318 1463 ntAPPRIS P2 TSL 1 (best) BASIC12.23□□□□□ -0.45
TRAV7A0A075B6U4 FOXO6-202ENST00000641094 1476 ntAPPRIS P1 BASIC12.23□□□□□ -0.45
TRAV7A0A075B6U4 PCDHA7-202ENST00000525929 5221 ntAPPRIS P2 TSL 1 (best) BASIC12.23□□□□□ -0.45
TRAV7A0A075B6U4 PHLDB3-201ENST00000292140 2591 ntAPPRIS P1 TSL 5 BASIC12.23□□□□□ -0.45
TRAV7A0A075B6U4 STARD10-220ENST00000545082 1085 ntTSL 3 BASIC12.23□□□□□ -0.45
TRAV7A0A075B6U4 UBE2S-203ENST00000589978 496 ntTSL 5 BASIC12.23□□□□□ -0.45
TRAV7A0A075B6U4 GNAS-AS1-202ENST00000443966 2341 ntTSL 5 BASIC12.23□□□□□ -0.45
TRAV7A0A075B6U4 LINC00461-203ENST00000504246 2300 ntTSL 2 BASIC12.23□□□□□ -0.45
TRAV7A0A075B6U4 FAM72C-202ENST00000584486 2297 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
TRAV7A0A075B6U4 GAREM2-202ENST00000407684 5138 ntTSL 2 BASIC12.23□□□□□ -0.45
TRAV7A0A075B6U4 KRT81-201ENST00000327741 1929 ntAPPRIS P2 TSL 1 (best) BASIC12.23□□□□□ -0.45
TRAV7A0A075B6U4 GPR6-202ENST00000414000 1945 ntTSL 2 BASIC12.23□□□□□ -0.45
TRAV7A0A075B6U4 LZTS2-202ENST00000370223 2883 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
TRAV7A0A075B6U4 RNF128-201ENST00000255499 2817 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
TRAV7A0A075B6U4 PDZD3-203ENST00000525131 1882 ntTSL 2 BASIC12.23□□□□□ -0.45
TRAV7A0A075B6U4 SCOC-207ENST00000506597 1838 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
TRAV7A0A075B6U4 AL138781.2-201ENST00000617896 1843 ntBASIC12.23□□□□□ -0.45
TRAV7A0A075B6U4 RAB43-201ENST00000315150 4467 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
TRAV7A0A075B6U4 PTH2R-204ENST00000617735 2472 ntTSL 2 BASIC12.22□□□□□ -0.45
TRAV7A0A075B6U4 TMEM109-201ENST00000227525 2413 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
TRAV7A0A075B6U4 NRL-202ENST00000396997 1517 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
TRAV7A0A075B6U4 PMS1-206ENST00000418224 3018 ntTSL 5 BASIC12.22□□□□□ -0.45
TRAV7A0A075B6U4 KIAA0895L-206ENST00000563902 2233 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
TRAV7A0A075B6U4 SPATA33-209ENST00000579310 1490 ntAPPRIS ALT2 TSL 2 BASIC12.22□□□□□ -0.45
TRAV7A0A075B6U4 TINAGL1-201ENST00000271064 2187 ntAPPRIS P3 TSL 1 (best) BASIC12.22□□□□□ -0.45
TRAV7A0A075B6U4 SH2D5-202ENST00000444387 1934 ntAPPRIS P1 TSL 2 BASIC12.22□□□□□ -0.45
TRAV7A0A075B6U4 KRT16P3-203ENST00000580621 1939 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
TRAV7A0A075B6U4 ARTN-204ENST00000438616 889 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
TRAV7A0A075B6U4 FAM46A-201ENST00000320172 5609 ntAPPRIS P2 TSL 1 (best) BASIC12.22□□□□□ -0.45
TRAV7A0A075B6U4 ZGPAT-206ENST00000448100 1881 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
TRAV7A0A075B6U4 TRAF3-203ENST00000392745 2459 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
TRAV7A0A075B6U4 WWOX-214ENST00000566780 2482 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
TRAV7A0A075B6U4 UCHL5-205ENST00000367454 1815 ntAPPRIS ALT1 TSL 1 (best) BASIC12.22□□□□□ -0.45
TRAV7A0A075B6U4 HOXA4-201ENST00000360046 1747 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
TRAV7A0A075B6U4 KPTN-201ENST00000338134 1691 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
TRAV7A0A075B6U4 MGLL-204ENST00000434178 4941 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
TRAV7A0A075B6U4 FRMD3-204ENST00000376438 2198 ntTSL 2 BASIC12.22□□□□□ -0.45
TRAV7A0A075B6U4 PNCK-204ENST00000370150 1612 ntAPPRIS P1 TSL 5 BASIC12.22□□□□□ -0.45
TRAV7A0A075B6U4 LACTBL1-201ENST00000426928 1641 ntAPPRIS P5 TSL 5 BASIC12.22□□□□□ -0.45
TRAV7A0A075B6U4 EI24-204ENST00000527235 1625 ntTSL 5 BASIC12.22□□□□□ -0.45
TRAV7A0A075B6U4 TCAP-201ENST00000309889 2123 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
TRAV7A0A075B6U4 LINC01168-201ENST00000461291 5254 ntTSL 2 BASIC12.22□□□□□ -0.45
TRAV7A0A075B6U4 FAM53B-201ENST00000280780 1568 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
TRAV7A0A075B6U4 POTEF-201ENST00000361163 1586 ntTSL 5 BASIC12.22□□□□□ -0.45
TRAV7A0A075B6U4 CMTM7-201ENST00000334983 2038 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
TRAV7A0A075B6U4 AC005332.7-201ENST00000614046 2005 ntBASIC12.21□□□□□ -0.45
TRAV7A0A075B6U4 EIF3C-211ENST00000566866 2986 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
TRAV7A0A075B6U4 RNF166-203ENST00000541206 2419 ntTSL 2 BASIC12.21□□□□□ -0.45
TRAV7A0A075B6U4 LAMP5-AS1-201ENST00000443469 1928 ntTSL 2 BASIC12.21□□□□□ -0.45
TRAV7A0A075B6U4 LSM4-203ENST00000593829 1908 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
TRAV7A0A075B6U4 COBL-201ENST00000265136 5291 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
TRAV7A0A075B6U4 MIB2-203ENST00000378712 2890 ntTSL 2 BASIC12.21□□□□□ -0.45
TRAV7A0A075B6U4 SPC24-206ENST00000592540 2315 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
TRAV7A0A075B6U4 TSPAN3-201ENST00000267970 6467 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
TRAV7A0A075B6U4 C19orf25-203ENST00000585675 1837 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
TRAV7A0A075B6U4 IDH1-205ENST00000446179 2298 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
TRAV7A0A075B6U4 IGFBP4-201ENST00000269593 2200 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
TRAV7A0A075B6U4 AL390879.2-201ENST00000424306 2222 ntTSL 2 BASIC12.21□□□□□ -0.45
TRAV7A0A075B6U4 NAA35-202ENST00000376040 1797 ntTSL 2 BASIC12.21□□□□□ -0.45
TRAV7A0A075B6U4 AC027702.1-201ENST00000563810 1770 ntBASIC12.21□□□□□ -0.45
TRAV7A0A075B6U4 KDM1A-202ENST00000400181 3059 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.45
TRAV7A0A075B6U4 ACSL6-205ENST00000379246 2622 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
TRAV7A0A075B6U4 ZNF394-201ENST00000337673 2179 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
TRAV7A0A075B6U4 ARHGEF19-201ENST00000270747 3029 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Retrieved 100 of 98,524 protein–RNA pairs in 20.6 ms