Protein–RNA interactions for Protein: Q9BYR8

KRTAP3-1, Keratin-associated protein 3-1, humanhuman

Predictions only

Length 98 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRTAP3-1Q9BYR8 NRIP3-203ENST00000531090 980 ntTSL 2 BASIC10.48□□□□□ -0.73
KRTAP3-1Q9BYR8 C15orf61-202ENST00000557807 769 ntTSL 2 BASIC10.48□□□□□ -0.73
KRTAP3-1Q9BYR8 LINC02136-201ENST00000567469 530 ntTSL 4 BASIC10.48□□□□□ -0.73
KRTAP3-1Q9BYR8 SRR-208ENST00000576848 588 ntTSL 4 BASIC10.48□□□□□ -0.73
KRTAP3-1Q9BYR8 CDKN2A-212ENST00000578845 678 ntTSL 2 BASIC10.48□□□□□ -0.73
KRTAP3-1Q9BYR8 HOMER3-206ENST00000594439 982 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
KRTAP3-1Q9BYR8 AC107419.1-202ENST00000608735 1081 ntTSL 3 BASIC10.48□□□□□ -0.73
KRTAP3-1Q9BYR8 SF1-220ENST00000626028 704 ntTSL 2 BASIC10.48□□□□□ -0.73
KRTAP3-1Q9BYR8 AL035685.1-201ENST00000636663 812 ntBASIC10.48□□□□□ -0.73
KRTAP3-1Q9BYR8 AC044802.1-201ENST00000501143 2894 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
KRTAP3-1Q9BYR8 TMCO6-203ENST00000394671 1887 ntAPPRIS P1 TSL 2 BASIC10.48□□□□□ -0.73
KRTAP3-1Q9BYR8 AC009237.3-201ENST00000393279 1427 ntBASIC10.48□□□□□ -0.73
KRTAP3-1Q9BYR8 CEP78-202ENST00000376597 2618 ntAPPRIS P4 TSL 1 (best) BASIC10.48□□□□□ -0.73
KRTAP3-1Q9BYR8 LBX2-203ENST00000460508 1452 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
KRTAP3-1Q9BYR8 GNS-208ENST00000543646 2164 ntAPPRIS ALT2 TSL 2 BASIC10.48□□□□□ -0.73
KRTAP3-1Q9BYR8 ELOA3B-201ENST00000611323 1641 ntAPPRIS P1 BASIC10.47□□□□□ -0.73
KRTAP3-1Q9BYR8 ELOA3D-201ENST00000620881 1641 ntAPPRIS P1 BASIC10.47□□□□□ -0.73
KRTAP3-1Q9BYR8 ARHGAP22-204ENST00000417247 2340 ntTSL 2 BASIC10.47□□□□□ -0.73
KRTAP3-1Q9BYR8 CHRDL2-210ENST00000622063 1691 ntTSL 5 BASIC10.47□□□□□ -0.73
KRTAP3-1Q9BYR8 PAIP1-203ENST00000436644 1734 ntAPPRIS ALT1 TSL 1 (best) BASIC10.47□□□□□ -0.73
KRTAP3-1Q9BYR8 TBL1Y-203ENST00000383032 2407 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
KRTAP3-1Q9BYR8 NR5A1-202ENST00000373588 3104 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
KRTAP3-1Q9BYR8 CPNE9-202ENST00000383831 1751 ntTSL 5 BASIC10.47□□□□□ -0.73
KRTAP3-1Q9BYR8 PACRGL-227ENST00000513459 1773 ntTSL 5 BASIC10.47□□□□□ -0.73
KRTAP3-1Q9BYR8 PRKRA-201ENST00000325748 1826 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
KRTAP3-1Q9BYR8 ZNF852-201ENST00000436261 1968 ntAPPRIS P1 TSL 2 BASIC10.47□□□□□ -0.73
KRTAP3-1Q9BYR8 ARHGEF7-202ENST00000317133 4361 ntAPPRIS ALT2 TSL 1 (best) BASIC10.47□□□□□ -0.73
KRTAP3-1Q9BYR8 LEFTY2-202ENST00000420304 2085 ntTSL 2 BASIC10.47□□□□□ -0.73
KRTAP3-1Q9BYR8 PCMTD2-202ENST00000299468 1049 ntTSL 5 BASIC10.47□□□□□ -0.73
KRTAP3-1Q9BYR8 LST1-204ENST00000376086 554 ntTSL 1 (best) BASIC10.47□□□□□ -0.73
KRTAP3-1Q9BYR8 PRICKLE4-201ENST00000394259 939 ntAPPRIS ALT2 TSL 5 BASIC10.47□□□□□ -0.73
KRTAP3-1Q9BYR8 TUSC3-209ENST00000509380 1266 ntTSL 5 BASIC10.47□□□□□ -0.73
KRTAP3-1Q9BYR8 KDM2B-217ENST00000543852 1188 ntTSL 5 BASIC10.47□□□□□ -0.73
KRTAP3-1Q9BYR8 FAM228B-208ENST00000613899 1238 ntAPPRIS ALT2 TSL 1 (best) BASIC10.47□□□□□ -0.73
KRTAP3-1Q9BYR8 TOLLIP-201ENST00000263646 2283 ntTSL 5 BASIC10.47□□□□□ -0.73
KRTAP3-1Q9BYR8 PAQR4-203ENST00000572687 2251 ntTSL 2 BASIC10.47□□□□□ -0.73
KRTAP3-1Q9BYR8 CSNK1G3-206ENST00000511130 1356 ntTSL 2 BASIC10.47□□□□□ -0.73
KRTAP3-1Q9BYR8 NPNT-214ENST00000514622 2362 ntTSL 2 BASIC10.47□□□□□ -0.73
KRTAP3-1Q9BYR8 RCCD1-201ENST00000394258 2689 ntAPPRIS P2 TSL 1 (best) BASIC10.47□□□□□ -0.73
KRTAP3-1Q9BYR8 LINC00682-201ENST00000498940 1625 ntTSL 3 BASIC10.47□□□□□ -0.73
KRTAP3-1Q9BYR8 ADARB1-205ENST00000437626 5032 ntTSL 1 (best) BASIC10.47□□□□□ -0.73
KRTAP3-1Q9BYR8 OR10C1-203ENST00000444197 1672 ntAPPRIS P1 BASIC10.47□□□□□ -0.73
KRTAP3-1Q9BYR8 RAB11FIP4-201ENST00000394744 1968 ntTSL 2 BASIC10.46□□□□□ -0.73
KRTAP3-1Q9BYR8 NBL1-209ENST00000548815 1953 ntAPPRIS P3 TSL 3 BASIC10.46□□□□□ -0.73
KRTAP3-1Q9BYR8 IGFALS-201ENST00000215539 2116 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.73
KRTAP3-1Q9BYR8 AL020996.1-203ENST00000536896 2307 ntBASIC10.46□□□□□ -0.73
KRTAP3-1Q9BYR8 SHROOM1-202ENST00000378676 2352 ntAPPRIS ALT2 TSL 5 BASIC10.46□□□□□ -0.73
KRTAP3-1Q9BYR8 TRAPPC12-202ENST00000382110 2483 ntAPPRIS P2 TSL 2 BASIC10.46□□□□□ -0.73
KRTAP3-1Q9BYR8 TMEM151A-201ENST00000327259 2562 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.73
KRTAP3-1Q9BYR8 RAVER2-201ENST00000294428 4398 ntAPPRIS ALT2 TSL 5 BASIC10.46□□□□□ -0.73
KRTAP3-1Q9BYR8 RPP21-222ENST00000433076 577 ntTSL 2 BASIC10.46□□□□□ -0.73
KRTAP3-1Q9BYR8 ERGIC1-206ENST00000519860 1000 ntTSL 3 BASIC10.46□□□□□ -0.73
KRTAP3-1Q9BYR8 RBPMS-209ENST00000520161 842 ntTSL 2 BASIC10.46□□□□□ -0.73
KRTAP3-1Q9BYR8 ZNF696-205ENST00000521537 705 ntTSL 2 BASIC10.46□□□□□ -0.73
KRTAP3-1Q9BYR8 PPP1R14A-204ENST00000591291 433 ntTSL 5 BASIC10.46□□□□□ -0.73
KRTAP3-1Q9BYR8 HAUS7-211ENST00000626181 414 ntAPPRIS ALT2 TSL 5 BASIC10.46□□□□□ -0.73
KRTAP3-1Q9BYR8 Z98883.1-202ENST00000635107 1289 ntTSL 5 BASIC10.46□□□□□ -0.73
KRTAP3-1Q9BYR8 ZNHIT2-201ENST00000310597 1306 ntAPPRIS P1 BASIC10.46□□□□□ -0.73
KRTAP3-1Q9BYR8 UQCR11-203ENST00000591899 1324 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.73
KRTAP3-1Q9BYR8 SLC38A7-205ENST00000564010 1437 ntTSL 2 BASIC10.46□□□□□ -0.74
KRTAP3-1Q9BYR8 TUSC3-203ENST00000503731 1498 ntAPPRIS P4 TSL 1 (best) BASIC10.46□□□□□ -0.74
KRTAP3-1Q9BYR8 TMEM204-201ENST00000253934 1686 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.74
KRTAP3-1Q9BYR8 SUMF2-204ENST00000395436 1683 ntAPPRIS ALT2 TSL 1 (best) BASIC10.46□□□□□ -0.74
KRTAP3-1Q9BYR8 EEF1A2-202ENST00000298049 1748 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.74
KRTAP3-1Q9BYR8 ST3GAL4-204ENST00000444328 1812 ntAPPRIS ALT1 TSL 5 BASIC10.46□□□□□ -0.74
KRTAP3-1Q9BYR8 MMP28-201ENST00000605424 1928 ntAPPRIS P3 TSL 1 (best) BASIC10.46□□□□□ -0.74
KRTAP3-1Q9BYR8 STXBP6-203ENST00000419632 1970 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.74
KRTAP3-1Q9BYR8 NRL-206ENST00000561028 2103 ntAPPRIS P1 TSL 2 BASIC10.46□□□□□ -0.74
KRTAP3-1Q9BYR8 FAM129C-205ENST00000595684 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC10.46□□□□□ -0.74
KRTAP3-1Q9BYR8 AC008073.3-201ENST00000610442 2281 ntAPPRIS P1 TSL 2 BASIC10.46□□□□□ -0.74
KRTAP3-1Q9BYR8 STIM2-211ENST00000639195 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC10.46□□□□□ -0.74
KRTAP3-1Q9BYR8 AC116562.4-201ENST00000641316 2276 ntBASIC10.46□□□□□ -0.74
KRTAP3-1Q9BYR8 KMT5C-201ENST00000255613 2308 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.74
KRTAP3-1Q9BYR8 TAF7-201ENST00000313368 2334 ntAPPRIS P1 BASIC10.46□□□□□ -0.74
KRTAP3-1Q9BYR8 UTP4-201ENST00000314423 2322 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.74
KRTAP3-1Q9BYR8 MAFF-202ENST00000407965 2325 ntAPPRIS P1 TSL 2 BASIC10.46□□□□□ -0.74
KRTAP3-1Q9BYR8 VSTM2A-203ENST00000404951 2521 ntTSL 5 BASIC10.46□□□□□ -0.74
KRTAP3-1Q9BYR8 PTPRJ-201ENST00000418331 5122 ntAPPRIS P2 TSL 1 (best) BASIC10.45□□□□□ -0.74
KRTAP3-1Q9BYR8 ECEL1-201ENST00000304546 2865 ntAPPRIS P3 TSL 1 (best) BASIC10.45□□□□□ -0.74
KRTAP3-1Q9BYR8 DMRT2-201ENST00000259622 2459 ntTSL 2 BASIC10.45□□□□□ -0.74
KRTAP3-1Q9BYR8 CHP2-201ENST00000300113 2382 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
KRTAP3-1Q9BYR8 NETO1-207ENST00000583169 2357 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
KRTAP3-1Q9BYR8 DLEU7-201ENST00000400393 2092 ntAPPRIS P3 TSL 1 (best) BASIC10.45□□□□□ -0.74
KRTAP3-1Q9BYR8 MORF4L2-AS1-201ENST00000435306 2086 ntTSL 1 (best) BASIC10.45□□□□□ -0.74
KRTAP3-1Q9BYR8 RNF135-205ENST00000535306 2098 ntTSL 1 (best) BASIC10.45□□□□□ -0.74
KRTAP3-1Q9BYR8 KCNN2-207ENST00000610748 2091 ntTSL 3 BASIC10.45□□□□□ -0.74
KRTAP3-1Q9BYR8 UBXN6-201ENST00000301281 1943 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
KRTAP3-1Q9BYR8 ST3GAL4-217ENST00000534083 1919 ntAPPRIS ALT1 TSL 5 BASIC10.45□□□□□ -0.74
KRTAP3-1Q9BYR8 AC005224.4-201ENST00000583262 1652 ntBASIC10.45□□□□□ -0.74
KRTAP3-1Q9BYR8 SCN1B-206ENST00000638536 1600 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
KRTAP3-1Q9BYR8 ZDHHC7-203ENST00000564466 1488 ntTSL 5 BASIC10.45□□□□□ -0.74
KRTAP3-1Q9BYR8 EXOG-203ENST00000422077 1317 ntTSL 2 BASIC10.45□□□□□ -0.74
KRTAP3-1Q9BYR8 BX842568.3-201ENST00000418104 571 ntBASIC10.45□□□□□ -0.74
KRTAP3-1Q9BYR8 CAMTA1-208ENST00000473578 567 ntTSL 1 (best) BASIC10.45□□□□□ -0.74
KRTAP3-1Q9BYR8 TMC6-218ENST00000591436 1155 ntTSL 1 (best) BASIC10.45□□□□□ -0.74
KRTAP3-1Q9BYR8 LINC01632-201ENST00000615763 496 ntTSL 3 BASIC10.45□□□□□ -0.74
KRTAP3-1Q9BYR8 C5orf47-201ENST00000340147 2522 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
KRTAP3-1Q9BYR8 KLC1-219ENST00000555836 2467 ntTSL 5 BASIC10.45□□□□□ -0.74
KRTAP3-1Q9BYR8 ASCL4-201ENST00000342331 2260 ntAPPRIS P1 BASIC10.45□□□□□ -0.74
KRTAP3-1Q9BYR8 ACAP3-201ENST00000353662 2280 ntTSL 1 (best) BASIC10.45□□□□□ -0.74
Retrieved 100 of 98,524 protein–RNA pairs in 17.4 ms