Protein–RNA interactions for Protein: Q8N9R0

LINC00304, Putative uncharacterized protein encoded by LINC00304, humanhuman

Predictions only

Length 145 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00304Q8N9R0 MRPL39-201ENST00000307301 1199 ntAPPRIS ALT2 TSL 5 BASIC12.13□□□□□ -0.47
LINC00304Q8N9R0 MRPL39-202ENST00000352957 1110 ntAPPRIS P3 TSL 1 (best) BASIC12.13□□□□□ -0.47
LINC00304Q8N9R0 HSD17B10-202ENST00000375298 823 ntTSL 3 BASIC12.13□□□□□ -0.47
LINC00304Q8N9R0 AC062017.1-203ENST00000413029 455 ntTSL 2 BASIC12.13□□□□□ -0.47
LINC00304Q8N9R0 ABHD14A-202ENST00000458031 1113 ntTSL 5 BASIC12.13□□□□□ -0.47
LINC00304Q8N9R0 POLE4-205ENST00000483063 1248 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
LINC00304Q8N9R0 AC007322.4-201ENST00000509611 723 ntBASIC12.13□□□□□ -0.47
LINC00304Q8N9R0 Z92544.1-201ENST00000567091 730 ntTSL 3 BASIC12.13□□□□□ -0.47
LINC00304Q8N9R0 AC069236.1-201ENST00000604339 616 ntBASIC12.13□□□□□ -0.47
LINC00304Q8N9R0 GGTLC3-201ENST00000619998 968 ntAPPRIS P1 TSL 5 BASIC12.13□□□□□ -0.47
LINC00304Q8N9R0 PARP1-210ENST00000629232 477 ntTSL 5 BASIC12.13□□□□□ -0.47
LINC00304Q8N9R0 NFIX-203ENST00000397661 3143 ntTSL 5 BASIC12.13□□□□□ -0.47
LINC00304Q8N9R0 TSR1-201ENST00000301364 5188 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
LINC00304Q8N9R0 PHOSPHO1-206ENST00000514112 1587 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
LINC00304Q8N9R0 EIPR1-206ENST00000443925 1771 ntTSL 3 BASIC12.13□□□□□ -0.47
LINC00304Q8N9R0 ADAMTS19-205ENST00000638972 5089 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
LINC00304Q8N9R0 PCDHA2-203ENST00000526136 5254 ntAPPRIS P2 TSL 1 (best) BASIC12.12□□□□□ -0.47
LINC00304Q8N9R0 RNF38-205ENST00000377877 1974 ntTSL 2 BASIC12.12□□□□□ -0.47
LINC00304Q8N9R0 SRP68-201ENST00000307877 2649 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
LINC00304Q8N9R0 HAND1-201ENST00000231121 1738 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
LINC00304Q8N9R0 SNX7-201ENST00000306121 1734 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
LINC00304Q8N9R0 FAM3A-202ENST00000359889 1712 ntAPPRIS P1 TSL 2 BASIC12.12□□□□□ -0.47
LINC00304Q8N9R0 BRWD1-202ENST00000341322 2495 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
LINC00304Q8N9R0 PCDHAC2-201ENST00000289269 5963 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
LINC00304Q8N9R0 CDV3P1-201ENST00000471403 739 ntBASIC12.12□□□□□ -0.47
LINC00304Q8N9R0 PRELID2-204ENST00000505416 738 ntAPPRIS P2 TSL 3 BASIC12.12□□□□□ -0.47
LINC00304Q8N9R0 FAM47E-204ENST00000510328 1002 ntAPPRIS ALT2 TSL 2 BASIC12.12□□□□□ -0.47
LINC00304Q8N9R0 TK2-208ENST00000545043 1120 ntTSL 2 BASIC12.12□□□□□ -0.47
LINC00304Q8N9R0 SNAP23-210ENST00000564153 775 ntTSL 2 BASIC12.12□□□□□ -0.47
LINC00304Q8N9R0 ELAC1-204ENST00000591429 975 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
LINC00304Q8N9R0 ARHGAP27-201ENST00000290470 1376 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
LINC00304Q8N9R0 SIRT3-202ENST00000524564 1395 ntTSL 2 BASIC12.12□□□□□ -0.47
LINC00304Q8N9R0 RFXAP-201ENST00000255476 2304 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
LINC00304Q8N9R0 MAP4K4-210ENST00000425019 4403 ntTSL 5 BASIC12.12□□□□□ -0.47
LINC00304Q8N9R0 IRAK3-203ENST00000545837 1579 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
LINC00304Q8N9R0 TFG-201ENST00000240851 1978 ntAPPRIS P3 TSL 1 (best) BASIC12.12□□□□□ -0.47
LINC00304Q8N9R0 REEP5-202ENST00000379638 3326 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
LINC00304Q8N9R0 CNTFR-202ENST00000378980 2052 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
LINC00304Q8N9R0 FRMD3-204ENST00000376438 2198 ntTSL 2 BASIC12.12□□□□□ -0.47
LINC00304Q8N9R0 STK25-234ENST00000535007 2459 ntTSL 2 BASIC12.12□□□□□ -0.47
LINC00304Q8N9R0 PLCB2-204ENST00000557821 4517 ntAPPRIS ALT1 TSL 1 (best) BASIC12.12□□□□□ -0.47
LINC00304Q8N9R0 GRK3-203ENST00000619906 2873 ntTSL 5 BASIC12.12□□□□□ -0.47
LINC00304Q8N9R0 CLIP2-202ENST00000361545 5445 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
LINC00304Q8N9R0 CD58-203ENST00000457047 1328 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
LINC00304Q8N9R0 HLA-C-201ENST00000376228 1536 ntAPPRIS P2 BASIC12.11□□□□□ -0.47
LINC00304Q8N9R0 OSR2-210ENST00000523368 1519 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
LINC00304Q8N9R0 RBPJL-202ENST00000372741 1636 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
LINC00304Q8N9R0 CDK18-203ENST00000429964 1648 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
LINC00304Q8N9R0 FAM129C-211ENST00000600871 1822 ntAPPRIS ALT2 TSL 5 BASIC12.11□□□□□ -0.47
LINC00304Q8N9R0 ARHGEF28-204ENST00000437974 5792 ntAPPRIS P3 TSL 1 (best) BASIC12.11□□□□□ -0.47
LINC00304Q8N9R0 SOAT2-201ENST00000301466 2044 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
LINC00304Q8N9R0 PXK-211ENST00000484288 2031 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
LINC00304Q8N9R0 NPAS3-210ENST00000551492 2817 ntAPPRIS ALT2 TSL 5 BASIC12.11□□□□□ -0.47
LINC00304Q8N9R0 DENND1A-203ENST00000373624 5010 ntAPPRIS P4 TSL 5 BASIC12.11□□□□□ -0.47
LINC00304Q8N9R0 TDRKH-206ENST00000440583 2296 ntTSL 5 BASIC12.11□□□□□ -0.47
LINC00304Q8N9R0 SPOP-206ENST00000504102 1865 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
LINC00304Q8N9R0 MAP1LC3A-201ENST00000360668 1574 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
LINC00304Q8N9R0 PTOV1-212ENST00000599732 1577 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
LINC00304Q8N9R0 CLN3-240ENST00000631023 1586 ntTSL 5 BASIC12.11□□□□□ -0.47
LINC00304Q8N9R0 GNB4-204ENST00000468623 1360 ntAPPRIS P1 TSL 2 BASIC12.11□□□□□ -0.47
LINC00304Q8N9R0 MTHFS-201ENST00000258874 907 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
LINC00304Q8N9R0 TM4SF5-201ENST00000270560 708 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
LINC00304Q8N9R0 CD58-201ENST00000369487 892 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
LINC00304Q8N9R0 CD58-202ENST00000369489 1098 ntAPPRIS P3 TSL 1 (best) BASIC12.11□□□□□ -0.47
LINC00304Q8N9R0 DHRS4-202ENST00000397074 785 ntTSL 5 BASIC12.11□□□□□ -0.47
LINC00304Q8N9R0 EIF5A-205ENST00000419711 1271 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
LINC00304Q8N9R0 PBX1-209ENST00000485769 834 ntTSL 2 BASIC12.11□□□□□ -0.47
LINC00304Q8N9R0 CD44-222ENST00000526025 1052 ntTSL 2 BASIC12.11□□□□□ -0.47
LINC00304Q8N9R0 TMEM218-207ENST00000528724 1117 ntTSL 5 BASIC12.11□□□□□ -0.47
LINC00304Q8N9R0 TMEM218-214ENST00000532156 954 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
LINC00304Q8N9R0 AC106738.2-202ENST00000558156 533 ntTSL 4 BASIC12.11□□□□□ -0.47
LINC00304Q8N9R0 AP2S1-207ENST00000599990 829 ntAPPRIS ALT1 TSL 2 BASIC12.11□□□□□ -0.47
LINC00304Q8N9R0 AL591742.1-201ENST00000604433 565 ntBASIC12.11□□□□□ -0.47
LINC00304Q8N9R0 RAP2CP1-201ENST00000605103 478 ntBASIC12.11□□□□□ -0.47
LINC00304Q8N9R0 VIM-AS1-202ENST00000605833 918 ntTSL 3 BASIC12.11□□□□□ -0.47
LINC00304Q8N9R0 FOXJ1-201ENST00000322957 2641 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
LINC00304Q8N9R0 DYNC1I1-211ENST00000537881 2146 ntTSL 5 BASIC12.11□□□□□ -0.47
LINC00304Q8N9R0 ZNF467-201ENST00000302017 2553 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
LINC00304Q8N9R0 PPCS-203ENST00000372561 1431 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
LINC00304Q8N9R0 SLC10A3-201ENST00000263512 2161 ntAPPRIS P3 TSL 2 BASIC12.11□□□□□ -0.47
LINC00304Q8N9R0 PLCG1-202ENST00000373271 7395 ntAPPRIS ALT1 TSL 1 (best) BASIC12.11□□□□□ -0.47
LINC00304Q8N9R0 CLIP2-201ENST00000223398 5563 ntAPPRIS P1 TSL 5 BASIC12.11□□□□□ -0.47
LINC00304Q8N9R0 ZGPAT-204ENST00000369967 1890 ntAPPRIS P1 TSL 5 BASIC12.1□□□□□ -0.47
LINC00304Q8N9R0 ARL6IP4-220ENST00000543566 1591 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
LINC00304Q8N9R0 AC004980.1-201ENST00000418663 2667 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
LINC00304Q8N9R0 OLIG3-201ENST00000367734 2049 ntAPPRIS P1 BASIC12.1□□□□□ -0.47
LINC00304Q8N9R0 BCR-201ENST00000305877 7082 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
LINC00304Q8N9R0 AC084757.3-201ENST00000558061 1943 ntTSL 3 BASIC12.1□□□□□ -0.47
LINC00304Q8N9R0 AC079834.2-201ENST00000609776 1949 ntBASIC12.1□□□□□ -0.47
LINC00304Q8N9R0 AC007192.1-201ENST00000593731 5142 ntAPPRIS P1 TSL 2 BASIC12.1□□□□□ -0.47
LINC00304Q8N9R0 TRNT1-207ENST00000420393 854 ntTSL 3 BASIC12.1□□□□□ -0.47
LINC00304Q8N9R0 CYP2T1P-201ENST00000432607 1285 ntBASIC12.1□□□□□ -0.47
LINC00304Q8N9R0 CNN2P6-201ENST00000439038 900 ntBASIC12.1□□□□□ -0.47
LINC00304Q8N9R0 AL645608.9-201ENST00000442292 829 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
LINC00304Q8N9R0 PPP1R14BP3-201ENST00000509033 445 ntBASIC12.1□□□□□ -0.47
LINC00304Q8N9R0 AL161421.1-201ENST00000619666 1101 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
LINC00304Q8N9R0 AC093762.2-201ENST00000641700 291 ntAPPRIS P1 BASIC12.1□□□□□ -0.47
LINC00304Q8N9R0 DOK3-202ENST00000357198 1729 ntTSL 2 BASIC12.1□□□□□ -0.47
LINC00304Q8N9R0 CACNA1A-227ENST00000636549 6792 ntAPPRIS ALT2 TSL 5 BASIC12.1□□□□□ -0.47
LINC00304Q8N9R0 FOXD2-201ENST00000334793 4675 ntAPPRIS P1 BASIC12.1□□□□□ -0.47
Retrieved 100 of 98,524 protein–RNA pairs in 28.1 ms