Protein–RNA interactions for Protein: Q8IX18

DHX40, Probable ATP-dependent RNA helicase DHX40, humanhuman

Known RBP Predictions only

Length 779 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DHX40Q8IX18 RUVBL2-206ENST00000595090 2009 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
DHX40Q8IX18 EML2-220ENST00000589876 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC22.99■■□□□ 1.27
DHX40Q8IX18 MRPL41-201ENST00000371443 1262 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
DHX40Q8IX18 AL355987.3-201ENST00000456614 735 ntAPPRIS P1 TSL 4 BASIC22.99■■□□□ 1.27
DHX40Q8IX18 IGHV3-19-201ENST00000521488 291 ntBASIC22.99■■□□□ 1.27
DHX40Q8IX18 MCRIP1-205ENST00000572645 1038 ntTSL 1 (best) BASIC22.99■■□□□ 1.27
DHX40Q8IX18 AC233992.3-201ENST00000607491 485 ntBASIC22.99■■□□□ 1.27
DHX40Q8IX18 RAB24-201ENST00000303251 1311 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
DHX40Q8IX18 TMEM44-203ENST00000381975 2197 ntTSL 1 (best) BASIC22.99■■□□□ 1.27
DHX40Q8IX18 DVL1-204ENST00000610709 2268 ntTSL 2 BASIC22.98■■□□□ 1.27
DHX40Q8IX18 CYB561-213ENST00000581573 2344 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
DHX40Q8IX18 PDLIM3-212ENST00000620787 2352 ntTSL 4 BASIC22.98■■□□□ 1.27
DHX40Q8IX18 RTBDN-207ENST00000589272 2076 ntTSL 2 BASIC22.98■■□□□ 1.27
DHX40Q8IX18 SEC11A-201ENST00000268220 1656 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
DHX40Q8IX18 SMCO4-201ENST00000298966 1104 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
DHX40Q8IX18 AC142381.2-201ENST00000566120 298 ntBASIC22.98■■□□□ 1.27
DHX40Q8IX18 TNFSF11-203ENST00000398795 2199 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
DHX40Q8IX18 NTN5-201ENST00000270235 1836 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
DHX40Q8IX18 SDR39U1-208ENST00000554698 1364 ntTSL 1 (best) BASIC22.98■■□□□ 1.27
DHX40Q8IX18 GFER-201ENST00000248114 2345 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
DHX40Q8IX18 KREMEN2-202ENST00000319500 1882 ntAPPRIS ALT2 TSL 1 (best) BASIC22.98■■□□□ 1.27
DHX40Q8IX18 CHRDL2-203ENST00000376332 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC22.98■■□□□ 1.27
DHX40Q8IX18 DGKZ-203ENST00000421244 2862 ntAPPRIS ALT2 TSL 1 (best) BASIC22.98■■□□□ 1.27
DHX40Q8IX18 B4GALT2-204ENST00000434555 1923 ntTSL 1 (best) BASIC22.98■■□□□ 1.27
DHX40Q8IX18 LRFN4-201ENST00000309602 2431 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
DHX40Q8IX18 HSPD1-202ENST00000388968 2455 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
DHX40Q8IX18 OTUB1-210ENST00000541478 1803 ntTSL 5 BASIC22.97■■□□□ 1.27
DHX40Q8IX18 TMCO6-203ENST00000394671 1887 ntAPPRIS P1 TSL 2 BASIC22.97■■□□□ 1.27
DHX40Q8IX18 IMPDH1-208ENST00000470772 1888 ntAPPRIS ALT1 TSL 5 BASIC22.97■■□□□ 1.27
DHX40Q8IX18 TMEM179B-205ENST00000533861 797 ntTSL 5 BASIC22.97■■□□□ 1.27
DHX40Q8IX18 MGAT5B-207ENST00000565675 872 ntTSL 1 (best) BASIC22.97■■□□□ 1.27
DHX40Q8IX18 SCN1B-203ENST00000595652 814 ntTSL 2 BASIC22.97■■□□□ 1.27
DHX40Q8IX18 TTLL7-214ENST00000610996 2028 ntTSL 5 BASIC22.97■■□□□ 1.27
DHX40Q8IX18 AQP11-201ENST00000313578 2152 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
DHX40Q8IX18 NSMF-201ENST00000265663 2981 ntAPPRIS P3 TSL 1 (best) BASIC22.97■■□□□ 1.27
DHX40Q8IX18 NSMF-206ENST00000371475 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC22.97■■□□□ 1.27
DHX40Q8IX18 YBX1-201ENST00000321358 1514 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
DHX40Q8IX18 NOC4L-201ENST00000330579 1632 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
DHX40Q8IX18 MON1A-203ENST00000455683 1617 ntAPPRIS ALT2 TSL 1 (best) BASIC22.97■■□□□ 1.27
DHX40Q8IX18 PARD3-213ENST00000545260 5740 ntAPPRIS ALT2 TSL 1 (best) BASIC22.97■■□□□ 1.27
DHX40Q8IX18 TMEM204-201ENST00000253934 1686 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
DHX40Q8IX18 OR10C1-203ENST00000444197 1672 ntAPPRIS P1 BASIC22.97■■□□□ 1.27
DHX40Q8IX18 GFI1-201ENST00000294702 2784 ntAPPRIS P1 TSL 2 BASIC22.96■■□□□ 1.27
DHX40Q8IX18 RNF165-205ENST00000588679 2904 ntBASIC22.96■■□□□ 1.27
DHX40Q8IX18 WIPF1-203ENST00000392546 2180 ntAPPRIS P2 TSL 5 BASIC22.96■■□□□ 1.27
DHX40Q8IX18 ISYNA1-201ENST00000338128 2420 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
DHX40Q8IX18 PRSS22-201ENST00000161006 1386 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
DHX40Q8IX18 CACNG8-201ENST00000270458 8747 ntAPPRIS ALT2 TSL 1 (best) BASIC22.96■■□□□ 1.27
DHX40Q8IX18 VPS29-206ENST00000549578 1523 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
DHX40Q8IX18 HNRNPA3-204ENST00000435711 1731 ntAPPRIS P3 TSL 1 (best) BASIC22.96■■□□□ 1.27
DHX40Q8IX18 RIPPLY3-201ENST00000329553 2235 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
DHX40Q8IX18 CRHR1-214ENST00000619154 2370 ntTSL 1 (best) BASIC22.96■■□□□ 1.27
DHX40Q8IX18 DALRD3-201ENST00000313778 1968 ntTSL 2 BASIC22.95■■□□□ 1.26
DHX40Q8IX18 PRKRA-201ENST00000325748 1826 ntAPPRIS P1 TSL 1 (best) BASIC22.95■■□□□ 1.26
DHX40Q8IX18 RAC1-201ENST00000348035 2323 ntAPPRIS P1 TSL 1 (best) BASIC22.95■■□□□ 1.26
DHX40Q8IX18 SRM-201ENST00000376957 1266 ntAPPRIS P1 TSL 1 (best) BASIC22.95■■□□□ 1.26
DHX40Q8IX18 ORMDL1-202ENST00000392349 1137 ntAPPRIS P1 TSL 1 (best) BASIC22.95■■□□□ 1.26
DHX40Q8IX18 CLN3-207ENST00000395653 1430 ntTSL 5 BASIC22.95■■□□□ 1.26
DHX40Q8IX18 SSPN-204ENST00000535504 419 ntTSL 1 (best) BASIC22.95■■□□□ 1.26
DHX40Q8IX18 GSR-204ENST00000537535 1323 ntTSL 1 (best) BASIC22.95■■□□□ 1.26
DHX40Q8IX18 AL355102.2-201ENST00000553811 600 ntAPPRIS P1 TSL 2 BASIC22.95■■□□□ 1.26
DHX40Q8IX18 AL031432.3-201ENST00000607698 485 ntBASIC22.95■■□□□ 1.26
DHX40Q8IX18 NEDD4L-237ENST00000617539 728 ntTSL 2 BASIC22.95■■□□□ 1.26
DHX40Q8IX18 PCDHB12-202ENST00000622978 2093 ntTSL 2 BASIC22.95■■□□□ 1.26
DHX40Q8IX18 LRP5-201ENST00000294304 5159 ntAPPRIS P1 TSL 1 (best) BASIC22.95■■□□□ 1.26
DHX40Q8IX18 NKX2-1-202ENST00000498187 2338 ntAPPRIS P1 TSL 1 (best) BASIC22.94■■□□□ 1.26
DHX40Q8IX18 PARD3-209ENST00000374790 5825 ntTSL 5 BASIC22.94■■□□□ 1.26
DHX40Q8IX18 PTPN11-202ENST00000392597 1876 ntTSL 1 (best) BASIC22.94■■□□□ 1.26
DHX40Q8IX18 TMEM132A-202ENST00000453848 3346 ntAPPRIS ALT2 TSL 1 (best) BASIC22.94■■□□□ 1.26
DHX40Q8IX18 POLD2-201ENST00000223361 1597 ntTSL 5 BASIC22.94■■□□□ 1.26
DHX40Q8IX18 LBX2-203ENST00000460508 1452 ntTSL 1 (best) BASIC22.94■■□□□ 1.26
DHX40Q8IX18 FXN-202ENST00000396364 980 ntTSL 5 BASIC22.94■■□□□ 1.26
DHX40Q8IX18 ITGA9-AS1-210ENST00000457661 738 ntTSL 4 BASIC22.94■■□□□ 1.26
DHX40Q8IX18 OTUB1-212ENST00000543988 1259 ntTSL 1 (best) BASIC22.94■■□□□ 1.26
DHX40Q8IX18 AC126544.1-201ENST00000580842 1059 ntBASIC22.94■■□□□ 1.26
DHX40Q8IX18 AC012313.1-203ENST00000597980 570 ntTSL 4 BASIC22.94■■□□□ 1.26
DHX40Q8IX18 SMARCD2-212ENST00000613943 2342 ntTSL 5 BASIC22.94■■□□□ 1.26
DHX40Q8IX18 FGF14-IT1-202ENST00000607251 2123 ntTSL 2 BASIC22.94■■□□□ 1.26
DHX40Q8IX18 SLC16A5-202ENST00000450736 2051 ntAPPRIS P2 TSL 1 (best) BASIC22.94■■□□□ 1.26
DHX40Q8IX18 ARSE-205ENST00000540563 1990 ntTSL 2 BASIC22.94■■□□□ 1.26
DHX40Q8IX18 SPNS2-201ENST00000329078 3447 ntAPPRIS P1 TSL 1 (best) BASIC22.94■■□□□ 1.26
DHX40Q8IX18 CHRDL2-210ENST00000622063 1691 ntTSL 5 BASIC22.93■■□□□ 1.26
DHX40Q8IX18 AC061975.6-201ENST00000579045 1553 ntBASIC22.93■■□□□ 1.26
DHX40Q8IX18 TOLLIP-201ENST00000263646 2283 ntTSL 5 BASIC22.93■■□□□ 1.26
DHX40Q8IX18 MSANTD1-203ENST00000507492 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC22.93■■□□□ 1.26
DHX40Q8IX18 PRR7-201ENST00000323249 1480 ntAPPRIS P1 TSL 1 (best) BASIC22.93■■□□□ 1.26
DHX40Q8IX18 SLC38A7-205ENST00000564010 1437 ntTSL 2 BASIC22.93■■□□□ 1.26
DHX40Q8IX18 FAM129C-207ENST00000599124 1918 ntAPPRIS ALT2 TSL 1 (best) BASIC22.93■■□□□ 1.26
DHX40Q8IX18 URAD-201ENST00000332715 931 ntAPPRIS P1 TSL 5 BASIC22.93■■□□□ 1.26
DHX40Q8IX18 STAU2-229ENST00000524300 3065 ntAPPRIS P4 TSL 2 BASIC22.93■■□□□ 1.26
DHX40Q8IX18 CPNE9-202ENST00000383831 1751 ntTSL 5 BASIC22.93■■□□□ 1.26
DHX40Q8IX18 HMCES-203ENST00000417226 1490 ntTSL 1 (best) BASIC22.92■■□□□ 1.26
DHX40Q8IX18 TCF3P1-201ENST00000423021 1937 ntBASIC22.92■■□□□ 1.26
DHX40Q8IX18 MEIS3-212ENST00000561293 1918 ntAPPRIS P3 TSL 1 (best) BASIC22.92■■□□□ 1.26
DHX40Q8IX18 SMOC2-206ENST00000535039 1875 ntTSL 5 BASIC22.92■■□□□ 1.26
DHX40Q8IX18 NAB2-201ENST00000300131 2711 ntAPPRIS P1 TSL 1 (best) BASIC22.92■■□□□ 1.26
DHX40Q8IX18 DOK1-201ENST00000233668 2555 ntAPPRIS P1 TSL 1 (best) BASIC22.92■■□□□ 1.26
DHX40Q8IX18 PRADC1-201ENST00000258083 1083 ntAPPRIS P1 TSL 1 (best) BASIC22.92■■□□□ 1.26
DHX40Q8IX18 EDA-201ENST00000338901 1233 ntBASIC22.92■■□□□ 1.26
DHX40Q8IX18 C20orf144-201ENST00000375222 571 ntAPPRIS P1 TSL 1 (best) BASIC22.92■■□□□ 1.26
Retrieved 100 of 98,524 protein–RNA pairs in 19.4 ms