Protein–RNA interactions for Protein: Q86UE6

LRRTM1, Leucine-rich repeat transmembrane neuronal protein 1, humanhuman

Predictions only

Length 522 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRTM1Q86UE6 CXXC5-201ENST00000302517 2658 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
LRRTM1Q86UE6 ECHDC2-221ENST00000536120 1446 ntTSL 3 BASIC17.93■□□□□ 0.46
LRRTM1Q86UE6 SMCO4-201ENST00000298966 1104 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
LRRTM1Q86UE6 TMEM80-201ENST00000397510 1094 ntAPPRIS P2 TSL 5 BASIC17.93■□□□□ 0.46
LRRTM1Q86UE6 RPP21-222ENST00000433076 577 ntTSL 2 BASIC17.93■□□□□ 0.46
LRRTM1Q86UE6 PACRGL-227ENST00000513459 1773 ntTSL 5 BASIC17.93■□□□□ 0.46
LRRTM1Q86UE6 MSANTD1-203ENST00000507492 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
LRRTM1Q86UE6 TUBA4A-202ENST00000392088 2499 ntTSL 2 BASIC17.93■□□□□ 0.46
LRRTM1Q86UE6 RBM6-204ENST00000422955 2324 ntTSL 2 BASIC17.93■□□□□ 0.46
LRRTM1Q86UE6 BACE2-201ENST00000328735 2824 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
LRRTM1Q86UE6 ACHE-207ENST00000428317 2159 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
LRRTM1Q86UE6 FBXL22-201ENST00000360587 1526 ntAPPRIS P2 TSL 1 (best) BASIC17.93■□□□□ 0.46
LRRTM1Q86UE6 ZNF511-202ENST00000361518 1520 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
LRRTM1Q86UE6 RGS11-204ENST00000397770 2390 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
LRRTM1Q86UE6 SHANK1-203ENST00000391813 4785 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
LRRTM1Q86UE6 LINC00304-201ENST00000321214 2243 ntTSL 2 BASIC17.92■□□□□ 0.46
LRRTM1Q86UE6 ZNF664-207ENST00000539644 5108 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
LRRTM1Q86UE6 MON1A-203ENST00000455683 1617 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
LRRTM1Q86UE6 TNFSF11-203ENST00000398795 2199 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
LRRTM1Q86UE6 TMEM134-202ENST00000393877 823 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
LRRTM1Q86UE6 PPP1R14A-204ENST00000591291 433 ntTSL 5 BASIC17.92■□□□□ 0.46
LRRTM1Q86UE6 HOMER3-206ENST00000594439 982 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
LRRTM1Q86UE6 KLHL11-201ENST00000319121 2383 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
LRRTM1Q86UE6 SUSD1-204ENST00000374270 3124 ntAPPRIS P3 TSL 1 (best) BASIC17.92■□□□□ 0.46
LRRTM1Q86UE6 HLA-G-204ENST00000376828 1490 ntAPPRIS ALT2 BASIC17.92■□□□□ 0.46
LRRTM1Q86UE6 TTYH3-201ENST00000258796 4840 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
LRRTM1Q86UE6 EMILIN2-201ENST00000254528 5910 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
LRRTM1Q86UE6 FGF14-IT1-202ENST00000607251 2123 ntTSL 2 BASIC17.92■□□□□ 0.46
LRRTM1Q86UE6 PTOV1-212ENST00000599732 1577 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
LRRTM1Q86UE6 POLE2-202ENST00000539565 1792 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
LRRTM1Q86UE6 AC011484.1-201ENST00000377652 1995 ntBASIC17.91■□□□□ 0.46
LRRTM1Q86UE6 PACSIN3-201ENST00000298838 1843 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
LRRTM1Q86UE6 SYNC-201ENST00000373484 1824 ntAPPRIS ALT2 TSL 2 BASIC17.91■□□□□ 0.46
LRRTM1Q86UE6 OTUB1-210ENST00000541478 1803 ntTSL 5 BASIC17.91■□□□□ 0.46
LRRTM1Q86UE6 BIN2-210ENST00000615107 2255 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
LRRTM1Q86UE6 SEC11A-201ENST00000268220 1656 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
LRRTM1Q86UE6 OR10C1-203ENST00000444197 1672 ntAPPRIS P1 BASIC17.91■□□□□ 0.46
LRRTM1Q86UE6 UBE2B-201ENST00000265339 2515 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
LRRTM1Q86UE6 PRICKLE4-201ENST00000394259 939 ntAPPRIS ALT2 TSL 5 BASIC17.91■□□□□ 0.46
LRRTM1Q86UE6 RNF146-206ENST00000480444 843 ntTSL 2 BASIC17.91■□□□□ 0.46
LRRTM1Q86UE6 NRIP3-203ENST00000531090 980 ntTSL 2 BASIC17.91■□□□□ 0.46
LRRTM1Q86UE6 LINC01881-206ENST00000614114 957 ntTSL 2 BASIC17.91■□□□□ 0.46
LRRTM1Q86UE6 HAUS7-211ENST00000626181 414 ntAPPRIS ALT2 TSL 5 BASIC17.91■□□□□ 0.46
LRRTM1Q86UE6 SOCS2-201ENST00000340600 2761 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
LRRTM1Q86UE6 GTF2IRD2B-208ENST00000619142 1932 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
LRRTM1Q86UE6 BAALC-203ENST00000309982 2831 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
LRRTM1Q86UE6 NEIL3-201ENST00000264596 2408 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
LRRTM1Q86UE6 ADRA1B-201ENST00000306675 2047 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
LRRTM1Q86UE6 ANAPC13-204ENST00000510994 1840 ntAPPRIS P1 TSL 2 BASIC17.91■□□□□ 0.46
LRRTM1Q86UE6 NFIL3-201ENST00000297689 2085 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
LRRTM1Q86UE6 LRCH4-211ENST00000619071 2098 ntTSL 5 BASIC17.91■□□□□ 0.46
LRRTM1Q86UE6 AP003356.1-202ENST00000517910 2770 ntTSL 2 BASIC17.91■□□□□ 0.46
LRRTM1Q86UE6 LINC00682-201ENST00000498940 1625 ntTSL 3 BASIC17.9■□□□□ 0.46
LRRTM1Q86UE6 ELOA3B-201ENST00000611323 1641 ntAPPRIS P1 BASIC17.9■□□□□ 0.46
LRRTM1Q86UE6 ELOA3D-201ENST00000620881 1641 ntAPPRIS P1 BASIC17.9■□□□□ 0.46
LRRTM1Q86UE6 MARK2-202ENST00000361128 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
LRRTM1Q86UE6 GALNS-201ENST00000268695 2363 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
LRRTM1Q86UE6 USP25-202ENST00000285681 5216 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
LRRTM1Q86UE6 NEU4-203ENST00000404257 2352 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
LRRTM1Q86UE6 LGI3-202ENST00000424267 3114 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
LRRTM1Q86UE6 MEF2D-203ENST00000368240 1905 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
LRRTM1Q86UE6 FAM129C-207ENST00000599124 1918 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
LRRTM1Q86UE6 ZNF692-202ENST00000366471 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
LRRTM1Q86UE6 KRTAP5-4-201ENST00000399682 1181 ntAPPRIS P5 BASIC17.9■□□□□ 0.46
LRRTM1Q86UE6 HDHD5-203ENST00000399852 1118 ntTSL 3 BASIC17.9■□□□□ 0.46
LRRTM1Q86UE6 CCDC115-202ENST00000409127 1247 ntTSL 2 BASIC17.9■□□□□ 0.46
LRRTM1Q86UE6 PTMA-205ENST00000410064 814 ntTSL 2 BASIC17.9■□□□□ 0.46
LRRTM1Q86UE6 BX842568.3-201ENST00000418104 571 ntBASIC17.9■□□□□ 0.46
LRRTM1Q86UE6 ERGIC1-206ENST00000519860 1000 ntTSL 3 BASIC17.9■□□□□ 0.46
LRRTM1Q86UE6 ZNF696-205ENST00000521537 705 ntTSL 2 BASIC17.9■□□□□ 0.46
LRRTM1Q86UE6 TMC6-218ENST00000591436 1155 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
LRRTM1Q86UE6 FBXW8-201ENST00000309909 2343 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
LRRTM1Q86UE6 CHRDL2-203ENST00000376332 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
LRRTM1Q86UE6 INPP1-202ENST00000392329 2162 ntAPPRIS P1 TSL 5 BASIC17.9■□□□□ 0.46
LRRTM1Q86UE6 MGAT1-204ENST00000427865 1919 ntAPPRIS P1 TSL 2 BASIC17.9■□□□□ 0.46
LRRTM1Q86UE6 FAM217A-201ENST00000274673 2265 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.46
LRRTM1Q86UE6 KLF16-201ENST00000250916 2890 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.46
LRRTM1Q86UE6 NKX2-1-202ENST00000498187 2338 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.46
LRRTM1Q86UE6 EEF1D-201ENST00000317198 1458 ntAPPRIS ALT2 TSL 5 BASIC17.89■□□□□ 0.45
LRRTM1Q86UE6 ROCK2-202ENST00000315872 8292 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
LRRTM1Q86UE6 SLC16A5-202ENST00000450736 2051 ntAPPRIS P2 TSL 1 (best) BASIC17.89■□□□□ 0.45
LRRTM1Q86UE6 SMG1P5-201ENST00000411546 2362 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
LRRTM1Q86UE6 NTN5-201ENST00000270235 1836 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
LRRTM1Q86UE6 YBX1-201ENST00000321358 1514 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
LRRTM1Q86UE6 AQP11-201ENST00000313578 2152 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
LRRTM1Q86UE6 KREMEN2-202ENST00000319500 1882 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
LRRTM1Q86UE6 PTPN11-202ENST00000392597 1876 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
LRRTM1Q86UE6 TRAPPC5-202ENST00000426877 765 ntAPPRIS P1 TSL 2 BASIC17.89■□□□□ 0.45
LRRTM1Q86UE6 LRRC75A-AS1-202ENST00000470491 1057 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
LRRTM1Q86UE6 TPD52-209ENST00000518937 2856 ntTSL 2 BASIC17.89■□□□□ 0.45
LRRTM1Q86UE6 TRIM58-201ENST00000366481 3225 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
LRRTM1Q86UE6 AGTR1-209ENST00000497524 2359 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
LRRTM1Q86UE6 PDLIM3-212ENST00000620787 2352 ntTSL 4 BASIC17.89■□□□□ 0.45
LRRTM1Q86UE6 CENPH-201ENST00000283006 1389 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
LRRTM1Q86UE6 LBX2-203ENST00000460508 1452 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
LRRTM1Q86UE6 PDZD3-201ENST00000322712 2204 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
LRRTM1Q86UE6 SCARB2-219ENST00000639738 1517 ntTSL 5 BASIC17.88■□□□□ 0.45
LRRTM1Q86UE6 CYB561-213ENST00000581573 2344 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
LRRTM1Q86UE6 CA7-201ENST00000338437 1555 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
LRRTM1Q86UE6 SPOCK3-215ENST00000510741 1963 ntAPPRIS ALT2 TSL 5 BASIC17.88■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 28.4 ms