Protein–RNA interactions for Protein: P54709

ATP1B3, Sodium/potassium-transporting ATPase subunit beta-3, humanhuman

Predictions only

Length 279 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP1B3P54709 NR6A1-202ENST00000373584 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
ATP1B3P54709 SQLE-206ENST00000523430 1879 ntTSL 2 BASIC17.88■□□□□ 0.45
ATP1B3P54709 FDFT1-210ENST00000525954 1890 ntTSL 2 BASIC17.88■□□□□ 0.45
ATP1B3P54709 MARK1-205ENST00000611084 5321 ntAPPRIS ALT1 TSL 1 (best) BASIC17.88■□□□□ 0.45
ATP1B3P54709 TXNRD3-204ENST00000640433 1932 ntAPPRIS P4 TSL 1 (best) BASIC17.88■□□□□ 0.45
ATP1B3P54709 DISC1-215ENST00000602281 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
ATP1B3P54709 CPAMD8-202ENST00000388925 5355 ntTSL 5 BASIC17.88■□□□□ 0.45
ATP1B3P54709 POMGNT2-202ENST00000441964 2531 ntAPPRIS P1 TSL 4 BASIC17.88■□□□□ 0.45
ATP1B3P54709 GLTPD2-201ENST00000331264 1023 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
ATP1B3P54709 LTC4S-202ENST00000401985 486 ntTSL 3 BASIC17.88■□□□□ 0.45
ATP1B3P54709 SUDS3P1-201ENST00000505831 966 ntBASIC17.88■□□□□ 0.45
ATP1B3P54709 SIRT3-215ENST00000532956 1235 ntTSL 2 BASIC17.88■□□□□ 0.45
ATP1B3P54709 SCN1B-203ENST00000595652 814 ntTSL 2 BASIC17.88■□□□□ 0.45
ATP1B3P54709 ILF3-217ENST00000589998 2622 ntTSL 2 BASIC17.88■□□□□ 0.45
ATP1B3P54709 KCNQ5-202ENST00000355194 6566 ntAPPRIS ALT1 TSL 5 BASIC17.88■□□□□ 0.45
ATP1B3P54709 KCNQ5-206ENST00000402622 6596 ntAPPRIS ALT2 TSL 5 BASIC17.88■□□□□ 0.45
ATP1B3P54709 ANAPC13-204ENST00000510994 1840 ntAPPRIS P1 TSL 2 BASIC17.88■□□□□ 0.45
ATP1B3P54709 UCK2-201ENST00000367879 1375 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
ATP1B3P54709 NOXA1-202ENST00000392815 1464 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
ATP1B3P54709 POMGNT2-201ENST00000344697 2544 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
ATP1B3P54709 C2CD2-202ENST00000380486 6345 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
ATP1B3P54709 DAPK3-201ENST00000301264 2105 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
ATP1B3P54709 DR1-201ENST00000370267 1647 ntAPPRIS P1 TSL 2 BASIC17.87■□□□□ 0.45
ATP1B3P54709 TYMP-202ENST00000395678 1614 ntAPPRIS P3 TSL 1 (best) BASIC17.87■□□□□ 0.45
ATP1B3P54709 CLDN23-201ENST00000519106 2169 ntAPPRIS P1 BASIC17.87■□□□□ 0.45
ATP1B3P54709 TCP11-203ENST00000373974 1689 ntAPPRIS ALT2 TSL 2 BASIC17.87■□□□□ 0.45
ATP1B3P54709 EOMES-202ENST00000449599 2829 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
ATP1B3P54709 LINC01547-202ENST00000397841 2303 ntTSL 2 BASIC17.87■□□□□ 0.45
ATP1B3P54709 SMPDL3A-203ENST00000539041 1755 ntTSL 2 BASIC17.87■□□□□ 0.45
ATP1B3P54709 CXCR3-201ENST00000373691 1861 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
ATP1B3P54709 PAX1-202ENST00000444366 1850 ntAPPRIS ALT2 TSL 2 BASIC17.87■□□□□ 0.45
ATP1B3P54709 MRM1-203ENST00000612760 1284 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
ATP1B3P54709 FBXL17-205ENST00000542267 5188 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
ATP1B3P54709 DISC1-202ENST00000317586 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
ATP1B3P54709 GRINA-201ENST00000313269 1968 ntAPPRIS P1 TSL 5 BASIC17.87■□□□□ 0.45
ATP1B3P54709 ZNF821-202ENST00000425432 2000 ntAPPRIS P1 TSL 5 BASIC17.87■□□□□ 0.45
ATP1B3P54709 AP003356.1-202ENST00000517910 2770 ntTSL 2 BASIC17.87■□□□□ 0.45
ATP1B3P54709 LSM11-201ENST00000286307 6584 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
ATP1B3P54709 AP006284.1-201ENST00000527620 2210 ntTSL 2 BASIC17.87■□□□□ 0.45
ATP1B3P54709 RASL12-202ENST00000421977 1523 ntTSL 2 BASIC17.87■□□□□ 0.45
ATP1B3P54709 HSF4-215ENST00000521374 1515 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
ATP1B3P54709 GMPPA-205ENST00000373917 1630 ntTSL 5 BASIC17.87■□□□□ 0.45
ATP1B3P54709 S1PR5-204ENST00000617721 1698 ntTSL 5 BASIC17.87■□□□□ 0.45
ATP1B3P54709 AC006128.1-201ENST00000624704 1661 ntBASIC17.87■□□□□ 0.45
ATP1B3P54709 FAM43B-201ENST00000332947 2572 ntAPPRIS P1 BASIC17.86■□□□□ 0.45
ATP1B3P54709 SLC25A22-228ENST00000628067 2692 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
ATP1B3P54709 CHST1-201ENST00000308064 2718 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
ATP1B3P54709 SCOC-207ENST00000506597 1838 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
ATP1B3P54709 TMEM62-201ENST00000260403 2771 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
ATP1B3P54709 B3GAT3-202ENST00000531383 2056 ntTSL 2 BASIC17.86■□□□□ 0.45
ATP1B3P54709 UBE2B-201ENST00000265339 2515 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
ATP1B3P54709 NKX2-2-AS1-201ENST00000549659 638 ntTSL 5 BASIC17.86■□□□□ 0.45
ATP1B3P54709 AC142381.2-201ENST00000566120 298 ntBASIC17.86■□□□□ 0.45
ATP1B3P54709 AP2S1-203ENST00000593442 636 ntTSL 2 BASIC17.86■□□□□ 0.45
ATP1B3P54709 AC053503.5-201ENST00000601508 636 ntBASIC17.86■□□□□ 0.45
ATP1B3P54709 TRAF4-217ENST00000618771 543 ntTSL 5 BASIC17.86■□□□□ 0.45
ATP1B3P54709 AL358852.1-201ENST00000623174 1268 ntBASIC17.86■□□□□ 0.45
ATP1B3P54709 CSNK1G3-206ENST00000511130 1356 ntTSL 2 BASIC17.86■□□□□ 0.45
ATP1B3P54709 MFF-207ENST00000409565 1548 ntTSL 2 BASIC17.86■□□□□ 0.45
ATP1B3P54709 VPS29-206ENST00000549578 1523 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
ATP1B3P54709 NOC4L-201ENST00000330579 1632 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
ATP1B3P54709 CACNA1A-246ENST00000637736 8340 ntAPPRIS ALT2 TSL 5 BASIC17.86■□□□□ 0.45
ATP1B3P54709 HCN2-201ENST00000251287 3408 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
ATP1B3P54709 CREB3-201ENST00000353704 1832 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
ATP1B3P54709 ZNF773-204ENST00000598770 2019 ntAPPRIS ALT2 TSL 2 BASIC17.86■□□□□ 0.45
ATP1B3P54709 AP000679.1-202ENST00000319763 2081 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
ATP1B3P54709 GTPBP3-222ENST00000600625 2493 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
ATP1B3P54709 EVC-201ENST00000264956 6431 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
ATP1B3P54709 EPO-201ENST00000252723 1330 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
ATP1B3P54709 ARPC5L-201ENST00000259477 1325 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
ATP1B3P54709 FAM151B-201ENST00000282226 1717 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
ATP1B3P54709 DUSP28-201ENST00000343217 1555 ntAPPRIS P1 TSL 2 BASIC17.85■□□□□ 0.45
ATP1B3P54709 MLST8-202ENST00000382450 1861 ntAPPRIS ALT1 TSL 2 BASIC17.85■□□□□ 0.45
ATP1B3P54709 NT5C3AP1-201ENST00000394500 1012 ntBASIC17.85■□□□□ 0.45
ATP1B3P54709 GRB10-206ENST00000402497 2289 ntTSL 5 BASIC17.85■□□□□ 0.45
ATP1B3P54709 JAKMIP1-203ENST00000409371 2420 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
ATP1B3P54709 CCDC107-205ENST00000421582 1324 ntAPPRIS ALT2 TSL 2 BASIC17.85■□□□□ 0.45
ATP1B3P54709 MAP4K4-210ENST00000425019 4403 ntTSL 5 BASIC17.85■□□□□ 0.45
ATP1B3P54709 PRKCQ-AS1-202ENST00000445427 1133 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
ATP1B3P54709 LINC00969-219ENST00000453324 1439 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
ATP1B3P54709 ANKRD53-204ENST00000457410 1671 ntTSL 5 BASIC17.85■□□□□ 0.45
ATP1B3P54709 CHTF8-210ENST00000523421 766 ntTSL 3 BASIC17.85■□□□□ 0.45
ATP1B3P54709 CCDC91-207ENST00000539107 2440 ntTSL 5 BASIC17.85■□□□□ 0.45
ATP1B3P54709 CALM1-203ENST00000544280 1064 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
ATP1B3P54709 ESR2-212ENST00000556275 2695 ntTSL 2 BASIC17.85■□□□□ 0.45
ATP1B3P54709 CERS4-208ENST00000559336 1515 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
ATP1B3P54709 MLST8-215ENST00000564088 1861 ntAPPRIS P3 TSL 2 BASIC17.85■□□□□ 0.45
ATP1B3P54709 EEF1DP3-203ENST00000566025 782 ntBASIC17.85■□□□□ 0.45
ATP1B3P54709 BCAT2-207ENST00000597011 1579 ntTSL 5 BASIC17.85■□□□□ 0.45
ATP1B3P54709 CDK13-207ENST00000613626 3099 ntTSL 5 BASIC17.85■□□□□ 0.45
ATP1B3P54709 AC121338.2-201ENST00000622535 1744 ntBASIC17.85■□□□□ 0.45
ATP1B3P54709 NRXN1-226ENST00000626899 2543 ntTSL 2 BASIC17.85■□□□□ 0.45
ATP1B3P54709 GFER-201ENST00000248114 2345 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
ATP1B3P54709 HOXA11-201ENST00000006015 2295 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
ATP1B3P54709 NTRK3-206ENST00000540489 2145 ntTSL 5 BASIC17.84■□□□□ 0.45
ATP1B3P54709 DOCK9-206ENST00000427887 4176 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
ATP1B3P54709 SLC43A3-225ENST00000533524 1879 ntAPPRIS ALT2 TSL 2 BASIC17.84■□□□□ 0.45
ATP1B3P54709 NEUROG1-201ENST00000314744 1668 ntAPPRIS P1 BASIC17.84■□□□□ 0.45
ATP1B3P54709 LGI2-201ENST00000382114 6428 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
ATP1B3P54709 KCNS2-201ENST00000287042 5219 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 23.4 ms