Protein–RNA interactions for Protein: P0CG40

SP9, Transcription factor Sp9, humanhuman

Predictions only

Length 484 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SP9P0CG40 CBWD6-213ENST00000613716 1820 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
SP9P0CG40 EXTL3-213ENST00000523149 1779 ntTSL 5 BASIC20.64■□□□□ 0.89
SP9P0CG40 POFUT1-201ENST00000375730 1507 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
SP9P0CG40 NHLRC4-202ENST00000540585 2071 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
SP9P0CG40 GCH1-202ENST00000395514 1977 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
SP9P0CG40 TARBP2-201ENST00000266987 1867 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
SP9P0CG40 TOX2-201ENST00000341197 1880 ntAPPRIS P1 TSL 2 BASIC20.63■□□□□ 0.89
SP9P0CG40 AC005521.1-201ENST00000393351 872 ntBASIC20.63■□□□□ 0.89
SP9P0CG40 AC005829.2-201ENST00000571422 1056 ntBASIC20.63■□□□□ 0.89
SP9P0CG40 GRAP-204ENST00000573099 846 ntTSL 3 BASIC20.63■□□□□ 0.89
SP9P0CG40 CORO1B-210ENST00000627576 960 ntTSL 5 BASIC20.63■□□□□ 0.89
SP9P0CG40 MEIOB-202ENST00000397344 1792 ntTSL 5 BASIC20.63■□□□□ 0.89
SP9P0CG40 GPR143-203ENST00000467482 1762 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
SP9P0CG40 USP36-218ENST00000590546 1771 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
SP9P0CG40 KLC1-203ENST00000347839 2271 ntTSL 5 BASIC20.63■□□□□ 0.89
SP9P0CG40 LRP5L-203ENST00000444995 1714 ntAPPRIS ALT2 TSL 5 BASIC20.63■□□□□ 0.89
SP9P0CG40 COPS7A-208ENST00000538410 1610 ntTSL 3 BASIC20.63■□□□□ 0.89
SP9P0CG40 NGLY1-204ENST00000396649 2024 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
SP9P0CG40 SMAD1-201ENST00000302085 1966 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
SP9P0CG40 BTBD1-202ENST00000379403 1467 ntTSL 5 BASIC20.62■□□□□ 0.89
SP9P0CG40 MORF4L1-202ENST00000379535 2274 ntTSL 2 BASIC20.62■□□□□ 0.89
SP9P0CG40 TXNL1-211ENST00000590954 1339 ntAPPRIS P1 TSL 2 BASIC20.62■□□□□ 0.89
SP9P0CG40 CRAT-202ENST00000393384 973 ntTSL 2 BASIC20.62■□□□□ 0.89
SP9P0CG40 TSPAN14-209ENST00000481124 808 ntTSL 2 BASIC20.62■□□□□ 0.89
SP9P0CG40 LINC01184-202ENST00000501173 949 ntTSL 5 BASIC20.62■□□□□ 0.89
SP9P0CG40 AC019257.1-201ENST00000517676 557 ntTSL 5 BASIC20.62■□□□□ 0.89
SP9P0CG40 SLC52A2-205ENST00000526752 710 ntTSL 3 BASIC20.62■□□□□ 0.89
SP9P0CG40 AP001458.2-201ENST00000528405 577 ntAPPRIS P1 TSL 4 BASIC20.62■□□□□ 0.89
SP9P0CG40 CIRBP-213ENST00000587323 1092 ntTSL 5 BASIC20.62■□□□□ 0.89
SP9P0CG40 AC138028.2-201ENST00000440406 1539 ntTSL 2 BASIC20.62■□□□□ 0.89
SP9P0CG40 RBMS1-205ENST00000409972 1815 ntTSL 5 BASIC20.62■□□□□ 0.89
SP9P0CG40 MIF-AS1-201ENST00000406213 1476 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
SP9P0CG40 IGF2-AS-201ENST00000381361 2063 ntTSL 2 BASIC20.62■□□□□ 0.89
SP9P0CG40 DBNL-207ENST00000440166 1415 ntTSL 2 BASIC20.61■□□□□ 0.89
SP9P0CG40 NKIRAS2-206ENST00000393885 1909 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
SP9P0CG40 AC020928.2-201ENST00000588717 2197 ntBASIC20.61■□□□□ 0.89
SP9P0CG40 FDFT1-209ENST00000525900 1596 ntTSL 5 BASIC20.61■□□□□ 0.89
SP9P0CG40 AL035541.1-201ENST00000424850 823 ntTSL 2 BASIC20.61■□□□□ 0.89
SP9P0CG40 KCNIP3-205ENST00000468529 985 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
SP9P0CG40 PACRGL-207ENST00000502938 810 ntTSL 4 BASIC20.61■□□□□ 0.89
SP9P0CG40 MRPL36-202ENST00000505059 610 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
SP9P0CG40 AL590094.1-202ENST00000634619 1131 ntTSL 5 BASIC20.61■□□□□ 0.89
SP9P0CG40 NUF2-208ENST00000524800 1845 ntTSL 5 BASIC20.61■□□□□ 0.89
SP9P0CG40 PTPN13-205ENST00000502971 1708 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
SP9P0CG40 PABPN1-202ENST00000397276 2768 ntAPPRIS ALT1 TSL 1 (best) BASIC20.61■□□□□ 0.89
SP9P0CG40 SRPK3-202ENST00000370101 1958 ntAPPRIS P3 TSL 1 (best) BASIC20.61■□□□□ 0.89
SP9P0CG40 CDKN1C-204ENST00000440480 1811 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
SP9P0CG40 RAB11B-201ENST00000328024 1751 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
SP9P0CG40 SERP1-205ENST00000487153 657 ntTSL 4 BASIC20.6■□□□□ 0.89
SP9P0CG40 TNFRSF12A-206ENST00000575124 1133 ntTSL 2 BASIC20.6■□□□□ 0.89
SP9P0CG40 TMEM204-201ENST00000253934 1686 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
SP9P0CG40 TOP1MT-201ENST00000329245 1958 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
SP9P0CG40 AC139530.1-201ENST00000575312 1977 ntBASIC20.59■□□□□ 0.89
SP9P0CG40 TOR2A-203ENST00000373284 1523 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
SP9P0CG40 ARHGAP8-204ENST00000389774 1725 ntAPPRIS ALT2 TSL 2 BASIC20.59■□□□□ 0.89
SP9P0CG40 PTPRCAP-201ENST00000326294 1292 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
SP9P0CG40 IAH1-215ENST00000497473 1266 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
SP9P0CG40 NDUFA13-203ENST00000503283 825 ntTSL 2 BASIC20.59■□□□□ 0.89
SP9P0CG40 EFTUD1P1-201ENST00000558187 596 ntTSL 4 BASIC20.59■□□□□ 0.89
SP9P0CG40 RARG-201ENST00000338561 1836 ntAPPRIS ALT1 TSL 1 (best) BASIC20.59■□□□□ 0.89
SP9P0CG40 C11orf96-202ENST00000528572 1834 ntBASIC20.59■□□□□ 0.89
SP9P0CG40 EPS8L1-209ENST00000588359 1407 ntTSL 5 BASIC20.59■□□□□ 0.89
SP9P0CG40 COMMD5-207ENST00000543949 1571 ntAPPRIS P1 TSL 3 BASIC20.59■□□□□ 0.89
SP9P0CG40 TSTA3-201ENST00000425753 1362 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
SP9P0CG40 GRK4-202ENST00000398051 2068 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
SP9P0CG40 KLHL35-201ENST00000376292 1500 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
SP9P0CG40 ATP5D-201ENST00000215375 997 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
SP9P0CG40 GAMT-201ENST00000252288 1121 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
SP9P0CG40 PRDX5-201ENST00000265462 893 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
SP9P0CG40 CMTM8-201ENST00000307526 1174 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
SP9P0CG40 MEIS3-201ENST00000331559 2104 ntAPPRIS ALT2 TSL 5 BASIC20.58■□□□□ 0.89
SP9P0CG40 RHOC-204ENST00000369633 1295 ntAPPRIS P1 TSL 3 BASIC20.58■□□□□ 0.89
SP9P0CG40 METTL21A-204ENST00000425132 869 ntTSL 2 BASIC20.58■□□□□ 0.89
SP9P0CG40 AF131216.3-201ENST00000525867 1099 ntTSL 2 BASIC20.58■□□□□ 0.89
SP9P0CG40 FOSL1-204ENST00000532401 1132 ntTSL 2 BASIC20.58■□□□□ 0.89
SP9P0CG40 LINC01956-201ENST00000557729 695 ntTSL 5 BASIC20.58■□□□□ 0.89
SP9P0CG40 CLDN5-203ENST00000413119 1760 ntTSL 2 BASIC20.58■□□□□ 0.89
SP9P0CG40 C11orf63-201ENST00000227349 3147 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
SP9P0CG40 HOXD9-201ENST00000249499 1870 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
SP9P0CG40 KPTN-201ENST00000338134 1691 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
SP9P0CG40 ALDH5A1-204ENST00000491546 1699 ntTSL 5 BASIC20.58■□□□□ 0.88
SP9P0CG40 RNF8-204ENST00000469731 1800 ntTSL 5 BASIC20.57■□□□□ 0.88
SP9P0CG40 CENPS-CORT-204ENST00000602296 1326 ntTSL 3 BASIC20.57■□□□□ 0.88
SP9P0CG40 FDXR-219ENST00000583917 1762 ntTSL 5 BASIC20.57■□□□□ 0.88
SP9P0CG40 SLC35F4-206ENST00000556826 1908 ntAPPRIS P1 TSL 5 BASIC20.57■□□□□ 0.88
SP9P0CG40 GPR150-201ENST00000380007 2065 ntAPPRIS P1 BASIC20.57■□□□□ 0.88
SP9P0CG40 EID2B-201ENST00000326282 1865 ntAPPRIS P1 BASIC20.57■□□□□ 0.88
SP9P0CG40 FAM212A-201ENST00000333323 1040 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
SP9P0CG40 NELFE-202ENST00000375429 1584 ntAPPRIS P2 TSL 1 (best) BASIC20.57■□□□□ 0.88
SP9P0CG40 NELFE-206ENST00000444811 1202 ntAPPRIS ALT2 TSL 2 BASIC20.57■□□□□ 0.88
SP9P0CG40 NOL7-202ENST00000451315 1184 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
SP9P0CG40 AC002310.4-201ENST00000568114 377 ntAPPRIS P1 TSL 5 BASIC20.57■□□□□ 0.88
SP9P0CG40 AC087742.1-201ENST00000575880 1738 ntBASIC20.57■□□□□ 0.88
SP9P0CG40 AF186192.3-201ENST00000583427 947 ntBASIC20.57■□□□□ 0.88
SP9P0CG40 PGF-201ENST00000238607 1693 ntAPPRIS ALT2 TSL 3 BASIC20.57■□□□□ 0.88
SP9P0CG40 ESR1-210ENST00000456483 1368 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
SP9P0CG40 RCN2-201ENST00000320963 1750 ntTSL 5 BASIC20.57■□□□□ 0.88
SP9P0CG40 NXNL2-202ENST00000375855 1457 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
SP9P0CG40 MGAT4D-208ENST00000515354 1806 ntTSL 3 BASIC20.56■□□□□ 0.88
SP9P0CG40 RNF5-203ENST00000375094 1168 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 30.4 ms