Protein–RNA interactions for Protein: P01127

PDGFB, Platelet-derived growth factor subunit B, humanhuman

Predicted RBP Predictions only

Length 241 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFBP01127 RAP1B-221ENST00000540209 1264 ntTSL 2 BASIC21.02■□□□□ 0.96
PDGFBP01127 GRAP-204ENST00000573099 846 ntTSL 3 BASIC21.02■□□□□ 0.96
PDGFBP01127 C17orf62-238ENST00000585064 1074 ntAPPRIS P1 TSL 2 BASIC21.02■□□□□ 0.96
PDGFBP01127 ZCCHC2-201ENST00000269499 5959 ntAPPRIS P2 TSL 5 BASIC21.01■□□□□ 0.95
PDGFBP01127 LEF1-203ENST00000438313 1488 ntAPPRIS ALT1 TSL 1 (best) BASIC21.01■□□□□ 0.95
PDGFBP01127 PRDX5-201ENST00000265462 893 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
PDGFBP01127 C5orf56-203ENST00000378953 942 ntAPPRIS ALT2 TSL 2 BASIC21.01■□□□□ 0.95
PDGFBP01127 CRAT-202ENST00000393384 973 ntTSL 2 BASIC21.01■□□□□ 0.95
PDGFBP01127 GGT1-206ENST00000404223 952 ntTSL 2 BASIC21.01■□□□□ 0.95
PDGFBP01127 RAP1B-229ENST00000543393 874 ntTSL 3 BASIC21.01■□□□□ 0.95
PDGFBP01127 NME3-204ENST00000563498 920 ntTSL 2 BASIC21.01■□□□□ 0.95
PDGFBP01127 GGTLC2-204ENST00000613850 973 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
PDGFBP01127 GGTLC2-205ENST00000618722 1047 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
PDGFBP01127 AL590094.1-202ENST00000634619 1131 ntTSL 5 BASIC21.01■□□□□ 0.95
PDGFBP01127 FBXL22-204ENST00000638704 729 ntAPPRIS ALT2 TSL 2 BASIC21.01■□□□□ 0.95
PDGFBP01127 GPR6-202ENST00000414000 1945 ntTSL 2 BASIC21.01■□□□□ 0.95
PDGFBP01127 KRT8P9-201ENST00000558927 1449 ntBASIC21.01■□□□□ 0.95
PDGFBP01127 RBMS1-205ENST00000409972 1815 ntTSL 5 BASIC21.01■□□□□ 0.95
PDGFBP01127 EGFR-204ENST00000420316 1570 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
PDGFBP01127 FDFT1-209ENST00000525900 1596 ntTSL 5 BASIC21.01■□□□□ 0.95
PDGFBP01127 SMAD1-201ENST00000302085 1966 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
PDGFBP01127 NFKBIL1-203ENST00000376148 1478 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
PDGFBP01127 HIGD1A-201ENST00000321331 1373 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
PDGFBP01127 NUF2-208ENST00000524800 1845 ntTSL 5 BASIC21■□□□□ 0.95
PDGFBP01127 KCNIP3-205ENST00000468529 985 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
PDGFBP01127 AKIP1-206ENST00000525005 1128 ntTSL 2 BASIC21■□□□□ 0.95
PDGFBP01127 AC145285.6-201ENST00000604632 637 ntBASIC21■□□□□ 0.95
PDGFBP01127 KRTAP5-11-203ENST00000617152 558 ntAPPRIS ALT2 TSL 5 BASIC21■□□□□ 0.95
PDGFBP01127 CAB39-203ENST00000410084 1324 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
PDGFBP01127 EEF1D-256ENST00000618139 2238 ntTSL 5 BASIC21■□□□□ 0.95
PDGFBP01127 C11orf96-202ENST00000528572 1834 ntBASIC20.99■□□□□ 0.95
PDGFBP01127 TOR2A-203ENST00000373284 1523 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
PDGFBP01127 TUB-201ENST00000299506 2019 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
PDGFBP01127 PHOSPHO1-206ENST00000514112 1587 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
PDGFBP01127 CTAG2-201ENST00000247306 993 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
PDGFBP01127 FAM26F-202ENST00000368605 1117 ntAPPRIS P1 TSL 5 BASIC20.99■□□□□ 0.95
PDGFBP01127 AL355355.2-201ENST00000442321 338 ntBASIC20.99■□□□□ 0.95
PDGFBP01127 ALG5-202ENST00000443765 1119 ntTSL 2 BASIC20.99■□□□□ 0.95
PDGFBP01127 REPIN1-210ENST00000482680 1029 ntTSL 2 BASIC20.99■□□□□ 0.95
PDGFBP01127 PACRGL-207ENST00000502938 810 ntTSL 4 BASIC20.99■□□□□ 0.95
PDGFBP01127 AC020922.2-201ENST00000596786 359 ntTSL 4 BASIC20.99■□□□□ 0.95
PDGFBP01127 SMAGP-204ENST00000603838 816 ntTSL 2 BASIC20.99■□□□□ 0.95
PDGFBP01127 RAB11B-201ENST00000328024 1751 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
PDGFBP01127 GMPPA-205ENST00000373917 1630 ntTSL 5 BASIC20.99■□□□□ 0.95
PDGFBP01127 SLC15A3-201ENST00000227880 2115 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
PDGFBP01127 MARC2-201ENST00000359316 1335 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
PDGFBP01127 SNTA1-201ENST00000217381 2342 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
PDGFBP01127 TMEM204-201ENST00000253934 1686 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
PDGFBP01127 NHLRC4-202ENST00000540585 2071 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
PDGFBP01127 C14orf80-201ENST00000329886 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC20.98■□□□□ 0.95
PDGFBP01127 CABP2-202ENST00000353903 789 ntAPPRIS P1 TSL 5 BASIC20.98■□□□□ 0.95
PDGFBP01127 AC019257.1-201ENST00000517676 557 ntTSL 5 BASIC20.98■□□□□ 0.95
PDGFBP01127 REPIN1-217ENST00000518514 478 ntTSL 3 BASIC20.98■□□□□ 0.95
PDGFBP01127 FOSL1-204ENST00000532401 1132 ntTSL 2 BASIC20.98■□□□□ 0.95
PDGFBP01127 AC105020.4-201ENST00000569467 563 ntTSL 4 BASIC20.98■□□□□ 0.95
PDGFBP01127 SLC39A11-207ENST00000579732 1004 ntTSL 2 BASIC20.98■□□□□ 0.95
PDGFBP01127 KLF3-AS1-202ENST00000440181 2368 ntTSL 2 BASIC20.98■□□□□ 0.95
PDGFBP01127 ILKAP-201ENST00000254654 1490 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
PDGFBP01127 TXNL1-211ENST00000590954 1339 ntAPPRIS P1 TSL 2 BASIC20.98■□□□□ 0.95
PDGFBP01127 SPHK2-213ENST00000601712 1394 ntAPPRIS ALT2 TSL 5 BASIC20.97■□□□□ 0.95
PDGFBP01127 FDXR-219ENST00000583917 1762 ntTSL 5 BASIC20.97■□□□□ 0.95
PDGFBP01127 COPS7A-208ENST00000538410 1610 ntTSL 3 BASIC20.97■□□□□ 0.95
PDGFBP01127 TUSC2-201ENST00000232496 1691 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
PDGFBP01127 MIF-AS1-201ENST00000406213 1476 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
PDGFBP01127 PLBD2-202ENST00000545182 2321 ntTSL 2 BASIC20.97■□□□□ 0.95
PDGFBP01127 PTPRCAP-201ENST00000326294 1292 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
PDGFBP01127 ZNRF2P2-202ENST00000442865 590 ntTSL 4 BASIC20.97■□□□□ 0.95
PDGFBP01127 UNC5B-AS1-201ENST00000447119 647 ntTSL 2 BASIC20.97■□□□□ 0.95
PDGFBP01127 ELOVL2-AS1-202ENST00000456616 903 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
PDGFBP01127 ABCD4-228ENST00000557588 763 ntTSL 3 BASIC20.97■□□□□ 0.95
PDGFBP01127 ARHGAP8-204ENST00000389774 1725 ntAPPRIS ALT2 TSL 2 BASIC20.97■□□□□ 0.95
PDGFBP01127 SLC27A4-202ENST00000372870 1557 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
PDGFBP01127 GRK4-202ENST00000398051 2068 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
PDGFBP01127 POLDIP2-201ENST00000540200 2121 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
PDGFBP01127 CHRDL2-210ENST00000622063 1691 ntTSL 5 BASIC20.96■□□□□ 0.95
PDGFBP01127 BTBD1-202ENST00000379403 1467 ntTSL 5 BASIC20.96■□□□□ 0.95
PDGFBP01127 WWTR1-AS1-202ENST00000479752 1700 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
PDGFBP01127 PRR35-201ENST00000409413 2216 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
PDGFBP01127 RCAN1-201ENST00000313806 2490 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
PDGFBP01127 CHCHD10-201ENST00000401675 691 ntAPPRIS P1 TSL 5 BASIC20.96■□□□□ 0.95
PDGFBP01127 PTPA-214ENST00000423100 988 ntTSL 2 BASIC20.96■□□□□ 0.95
PDGFBP01127 SERP1-205ENST00000487153 657 ntTSL 4 BASIC20.96■□□□□ 0.95
PDGFBP01127 USF2-205ENST00000594064 1179 ntTSL 2 BASIC20.96■□□□□ 0.95
PDGFBP01127 NCBP2-AS2-201ENST00000602845 918 ntAPPRIS P1 BASIC20.96■□□□□ 0.95
PDGFBP01127 GPR150-201ENST00000380007 2065 ntAPPRIS P1 BASIC20.96■□□□□ 0.95
PDGFBP01127 OTUD5-203ENST00000396743 2682 ntAPPRIS ALT1 TSL 1 (best) BASIC20.96■□□□□ 0.95
PDGFBP01127 HOXD9-201ENST00000249499 1870 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
PDGFBP01127 SLC35F4-206ENST00000556826 1908 ntAPPRIS P1 TSL 5 BASIC20.96■□□□□ 0.95
PDGFBP01127 LRP5L-203ENST00000444995 1714 ntAPPRIS ALT2 TSL 5 BASIC20.95■□□□□ 0.94
PDGFBP01127 FZD9-201ENST00000344575 2338 ntAPPRIS P1 BASIC20.95■□□□□ 0.94
PDGFBP01127 EIF2B4-201ENST00000347454 1792 ntAPPRIS P3 TSL 1 (best) BASIC20.95■□□□□ 0.94
PDGFBP01127 RNF8-204ENST00000469731 1800 ntTSL 5 BASIC20.95■□□□□ 0.94
PDGFBP01127 CBWD6-213ENST00000613716 1820 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
PDGFBP01127 TARBP2-201ENST00000266987 1867 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
PDGFBP01127 SMOX-202ENST00000305958 2233 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
PDGFBP01127 ODF3B-201ENST00000329363 970 ntAPPRIS P1 TSL 5 BASIC20.95■□□□□ 0.94
PDGFBP01127 METTL21A-207ENST00000442521 1003 ntAPPRIS P1 TSL 2 BASIC20.95■□□□□ 0.94
PDGFBP01127 TSPAN14-209ENST00000481124 808 ntTSL 2 BASIC20.95■□□□□ 0.94
PDGFBP01127 SRPK3-202ENST00000370101 1958 ntAPPRIS P3 TSL 1 (best) BASIC20.95■□□□□ 0.94
PDGFBP01127 CLDN5-203ENST00000413119 1760 ntTSL 2 BASIC20.95■□□□□ 0.94
Retrieved 100 of 98,524 protein–RNA pairs in 41.9 ms