Protein–RNA interactions for Protein: O14579

COPE, Coatomer subunit epsilon, humanhuman

Predictions only

Length 308 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COPEO14579 BCAT2-207ENST00000597011 1579 ntTSL 5 BASIC20.66■□□□□ 0.9
COPEO14579 NAA10-208ENST00000464845 1772 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
COPEO14579 SSH3-202ENST00000308298 2046 ntTSL 2 BASIC20.66■□□□□ 0.9
COPEO14579 BRPF3-202ENST00000357641 6052 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
COPEO14579 RASGRP2-211ENST00000394432 2304 ntAPPRIS P2 TSL 1 (best) BASIC20.66■□□□□ 0.9
COPEO14579 TSNAXIP1-202ENST00000415766 2338 ntAPPRIS ALT2 TSL 2 BASIC20.66■□□□□ 0.9
COPEO14579 SOX2-201ENST00000325404 2513 ntAPPRIS P1 BASIC20.66■□□□□ 0.9
COPEO14579 LGI3-202ENST00000424267 3114 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
COPEO14579 CHD1L-201ENST00000361293 2484 ntTSL 2 BASIC20.65■□□□□ 0.9
COPEO14579 SLC39A5-209ENST00000454355 1968 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
COPEO14579 ROR1-201ENST00000371079 5832 ntAPPRIS P2 TSL 1 (best) BASIC20.65■□□□□ 0.9
COPEO14579 AL161756.1-202ENST00000359491 1717 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
COPEO14579 SETD9-211ENST00000628593 1306 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
COPEO14579 SRM-201ENST00000376957 1266 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
COPEO14579 INS-202ENST00000381330 597 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
COPEO14579 PRICKLE4-201ENST00000394259 939 ntAPPRIS ALT2 TSL 5 BASIC20.65■□□□□ 0.9
COPEO14579 IL15RA-209ENST00000397255 759 ntAPPRIS ALT2 TSL 5 BASIC20.65■□□□□ 0.9
COPEO14579 BX842568.3-201ENST00000418104 571 ntBASIC20.65■□□□□ 0.9
COPEO14579 SUMF1-205ENST00000458465 1102 ntTSL 2 BASIC20.65■□□□□ 0.9
COPEO14579 SMIM29-205ENST00000468145 903 ntTSL 2 BASIC20.65■□□□□ 0.9
COPEO14579 LRRC75A-AS1-202ENST00000470491 1057 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
COPEO14579 SMIM29-207ENST00000481533 1053 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
COPEO14579 IL15RA-216ENST00000530685 660 ntTSL 5 BASIC20.65■□□□□ 0.9
COPEO14579 PPP1R14A-204ENST00000591291 433 ntTSL 5 BASIC20.65■□□□□ 0.9
COPEO14579 ZNF771-201ENST00000319296 2371 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
COPEO14579 FAM189B-201ENST00000350210 2379 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
COPEO14579 AL512408.1-201ENST00000569378 2000 ntBASIC20.65■□□□□ 0.9
COPEO14579 TPST2-202ENST00000398110 1968 ntAPPRIS P1 TSL 2 BASIC20.65■□□□□ 0.9
COPEO14579 HMOX2-218ENST00000619913 1908 ntAPPRIS P1 TSL 5 BASIC20.65■□□□□ 0.9
COPEO14579 NFIB-207ENST00000397579 3129 ntTSL 5 BASIC20.64■□□□□ 0.9
COPEO14579 PRMT2-210ENST00000458387 1874 ntTSL 1 (best) BASIC20.64■□□□□ 0.9
COPEO14579 HDHD5-201ENST00000155674 1735 ntAPPRIS P3 TSL 1 (best) BASIC20.64■□□□□ 0.9
COPEO14579 SYTL1-211ENST00000618673 1712 ntTSL 5 BASIC20.64■□□□□ 0.9
COPEO14579 TYMP-202ENST00000395678 1614 ntAPPRIS P3 TSL 1 (best) BASIC20.64■□□□□ 0.9
COPEO14579 IGFBP3-210ENST00000613132 2412 ntTSL 5 BASIC20.64■□□□□ 0.89
COPEO14579 HSD3B7-202ENST00000297679 2172 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
COPEO14579 PCMTD2-202ENST00000299468 1049 ntTSL 5 BASIC20.64■□□□□ 0.89
COPEO14579 PYCARD-202ENST00000350605 696 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
COPEO14579 GRM5-202ENST00000305447 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.89
COPEO14579 AC112907.3-201ENST00000577781 2400 ntBASIC20.64■□□□□ 0.89
COPEO14579 PYCR3-207ENST00000495276 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.89
COPEO14579 ZNF579-201ENST00000325421 2899 ntAPPRIS P1 TSL 2 BASIC20.64■□□□□ 0.89
COPEO14579 USP48-201ENST00000308271 4595 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
COPEO14579 HPS6-201ENST00000299238 2649 ntAPPRIS P1 BASIC20.63■□□□□ 0.89
COPEO14579 FBXL19-207ENST00000565690 2570 ntAPPRIS ALT2 TSL 5 BASIC20.63■□□□□ 0.89
COPEO14579 FBXO31-201ENST00000311635 5934 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
COPEO14579 MRPL41-201ENST00000371443 1262 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
COPEO14579 FXN-202ENST00000396364 980 ntTSL 5 BASIC20.63■□□□□ 0.89
COPEO14579 AL161908.1-203ENST00000425370 506 ntTSL 2 BASIC20.63■□□□□ 0.89
COPEO14579 AL356441.2-201ENST00000443009 864 ntBASIC20.63■□□□□ 0.89
COPEO14579 SENCR-201ENST00000526269 1298 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
COPEO14579 TGFBR3L-202ENST00000565886 1260 ntAPPRIS P1 TSL 5 BASIC20.63■□□□□ 0.89
COPEO14579 HOMER3-206ENST00000594439 982 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
COPEO14579 AL162377.1-201ENST00000618844 1793 ntBASIC20.63■□□□□ 0.89
COPEO14579 FYN-204ENST00000368678 2573 ntAPPRIS ALT1 TSL 5 BASIC20.63■□□□□ 0.89
COPEO14579 USP39-204ENST00000409766 2033 ntTSL 2 BASIC20.63■□□□□ 0.89
COPEO14579 YBX1-201ENST00000321358 1514 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
COPEO14579 BX005040.4-201ENST00000637145 1518 ntBASIC20.63■□□□□ 0.89
COPEO14579 MZF1-203ENST00000594234 2385 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
COPEO14579 NGEF-202ENST00000373552 2286 ntAPPRIS P1 TSL 2 BASIC20.62■□□□□ 0.89
COPEO14579 NYX-202ENST00000378220 2297 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
COPEO14579 CXCL16-201ENST00000293778 2222 ntAPPRIS P2 TSL 1 (best) BASIC20.62■□□□□ 0.89
COPEO14579 TDRP-203ENST00000523656 2622 ntTSL 5 BASIC20.62■□□□□ 0.89
COPEO14579 SLC25A22-216ENST00000531214 1790 ntAPPRIS P1 TSL 2 BASIC20.62■□□□□ 0.89
COPEO14579 CBLN2-201ENST00000269503 2945 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
COPEO14579 AC007249.2-201ENST00000553181 1737 ntTSL 5 BASIC20.62■□□□□ 0.89
COPEO14579 OLFM1-205ENST00000371796 2492 ntTSL 2 BASIC20.62■□□□□ 0.89
COPEO14579 ADAMTS10-205ENST00000595838 2458 ntTSL 2 BASIC20.62■□□□□ 0.89
COPEO14579 NRP2-206ENST00000417189 2386 ntTSL 2 BASIC20.62■□□□□ 0.89
COPEO14579 PEMT-201ENST00000255389 1013 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
COPEO14579 DNAJC4-202ENST00000321685 1288 ntAPPRIS P3 TSL 1 (best) BASIC20.62■□□□□ 0.89
COPEO14579 DNAJC4-212ENST00000628077 938 ntTSL 5 BASIC20.62■□□□□ 0.89
COPEO14579 SDHA-220ENST00000617470 1952 ntTSL 5 BASIC20.62■□□□□ 0.89
COPEO14579 PFKFB3-219ENST00000640683 2311 ntTSL 5 BASIC20.62■□□□□ 0.89
COPEO14579 TSR1-201ENST00000301364 5188 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
COPEO14579 CACNB2-203ENST00000352115 1911 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
COPEO14579 APAF1-210ENST00000551964 5444 ntAPPRIS P4 TSL 1 (best) BASIC20.62■□□□□ 0.89
COPEO14579 PAN3-201ENST00000380958 2833 ntAPPRIS P2 TSL 5 BASIC20.62■□□□□ 0.89
COPEO14579 RIMBP3B-201ENST00000620804 6105 ntAPPRIS P1 BASIC20.61■□□□□ 0.89
COPEO14579 FAM213A-202ENST00000372185 1723 ntTSL 2 BASIC20.61■□□□□ 0.89
COPEO14579 IDH1-205ENST00000446179 2298 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
COPEO14579 EOMES-202ENST00000449599 2829 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
COPEO14579 CYP21A2-222ENST00000435122 1914 ntTSL 2 BASIC20.61■□□□□ 0.89
COPEO14579 CPAMD8-202ENST00000388925 5355 ntTSL 5 BASIC20.61■□□□□ 0.89
COPEO14579 CDO1-201ENST00000250535 1860 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
COPEO14579 NFYC-204ENST00000372653 1862 ntTSL 2 BASIC20.61■□□□□ 0.89
COPEO14579 KANK4-202ENST00000354381 2103 ntTSL 2 BASIC20.61■□□□□ 0.89
COPEO14579 CBWD3-212ENST00000616550 721 ntTSL 2 BASIC20.61■□□□□ 0.89
COPEO14579 CBWD6-216ENST00000617933 721 ntTSL 3 BASIC20.61■□□□□ 0.89
COPEO14579 CIRBP-225ENST00000589710 1835 ntTSL 2 BASIC20.61■□□□□ 0.89
COPEO14579 ENGASE-205ENST00000579016 2579 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
COPEO14579 C7orf43-206ENST00000456769 2046 ntTSL 2 BASIC20.61■□□□□ 0.89
COPEO14579 SEMA6B-202ENST00000586965 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
COPEO14579 ME3-202ENST00000393324 2240 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
COPEO14579 PLCB2-204ENST00000557821 4517 ntAPPRIS ALT1 TSL 1 (best) BASIC20.61■□□□□ 0.89
COPEO14579 C2CD2-202ENST00000380486 6345 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
COPEO14579 TRIM4-202ENST00000354241 1942 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
COPEO14579 CCDC47-202ENST00000403162 2195 ntAPPRIS P1 TSL 2 BASIC20.61■□□□□ 0.89
COPEO14579 IVD-206ENST00000487418 1809 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
COPEO14579 ANAPC13-204ENST00000510994 1840 ntAPPRIS P1 TSL 2 BASIC20.6■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 19.3 ms