Protein–RNA interactions for Protein: Q9Y282

ERGIC3, Endoplasmic reticulum-Golgi intermediate compartment protein 3, humanhuman

Predictions only

Length 383 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERGIC3Q9Y282 ZNF771-201ENST00000319296 2371 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
ERGIC3Q9Y282 SNX4-201ENST00000251775 2513 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
ERGIC3Q9Y282 HSD17B14-201ENST00000263278 1238 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
ERGIC3Q9Y282 WBP1-203ENST00000409737 1110 ntAPPRIS ALT1 TSL 5 BASIC18.88■□□□□ 0.61
ERGIC3Q9Y282 BX664725.1-201ENST00000438252 379 ntBASIC18.88■□□□□ 0.61
ERGIC3Q9Y282 C12orf75-207ENST00000552457 689 ntTSL 5 BASIC18.88■□□□□ 0.61
ERGIC3Q9Y282 AC012354.3-201ENST00000623734 483 ntBASIC18.88■□□□□ 0.61
ERGIC3Q9Y282 HSPB2-201ENST00000304298 1335 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
ERGIC3Q9Y282 GOLGA3-203ENST00000456883 5496 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
ERGIC3Q9Y282 SDSL-202ENST00000403593 1449 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
ERGIC3Q9Y282 BACE2-202ENST00000330333 2993 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
ERGIC3Q9Y282 VKORC1L1-202ENST00000434382 1541 ntTSL 2 BASIC18.88■□□□□ 0.61
ERGIC3Q9Y282 LAYN-204ENST00000525126 1763 ntTSL 5 BASIC18.88■□□□□ 0.61
ERGIC3Q9Y282 SPOCK2-209ENST00000536168 1824 ntAPPRIS ALT2 TSL 5 BASIC18.88■□□□□ 0.61
ERGIC3Q9Y282 FAM239A-202ENST00000438107 2155 ntTSL 5 BASIC18.88■□□□□ 0.61
ERGIC3Q9Y282 AURKA-202ENST00000347343 2248 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
ERGIC3Q9Y282 ARHGAP28-203ENST00000383472 2295 ntAPPRIS ALT2 TSL 5 BASIC18.88■□□□□ 0.61
ERGIC3Q9Y282 ARHGAP22-204ENST00000417247 2340 ntTSL 2 BASIC18.88■□□□□ 0.61
ERGIC3Q9Y282 SCARF1-202ENST00000348987 2619 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
ERGIC3Q9Y282 ATRN-201ENST00000262919 8633 ntAPPRIS P4 TSL 5 BASIC18.87■□□□□ 0.61
ERGIC3Q9Y282 FSTL3-201ENST00000166139 2542 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
ERGIC3Q9Y282 HAUS4-201ENST00000206474 1642 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
ERGIC3Q9Y282 AKR7A2-201ENST00000235835 1362 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
ERGIC3Q9Y282 PHF12-201ENST00000268756 2957 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
ERGIC3Q9Y282 SPOPL-201ENST00000280098 6025 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
ERGIC3Q9Y282 ARID1A-201ENST00000324856 8577 ntAPPRIS P3 TSL 1 (best) BASIC18.87■□□□□ 0.61
ERGIC3Q9Y282 SHMT1-203ENST00000354098 1656 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
ERGIC3Q9Y282 FGFR2-204ENST00000356226 3547 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
ERGIC3Q9Y282 GPR35-202ENST00000403859 2032 ntAPPRIS P3 TSL 2 BASIC18.87■□□□□ 0.61
ERGIC3Q9Y282 AL034346.1-201ENST00000568244 1277 ntBASIC18.87■□□□□ 0.61
ERGIC3Q9Y282 AL031848.2-201ENST00000607670 837 ntBASIC18.87■□□□□ 0.61
ERGIC3Q9Y282 AC087239.1-201ENST00000622671 572 ntBASIC18.87■□□□□ 0.61
ERGIC3Q9Y282 SUSD1-204ENST00000374270 3124 ntAPPRIS P3 TSL 1 (best) BASIC18.87■□□□□ 0.61
ERGIC3Q9Y282 ZNF839-202ENST00000442396 2987 ntAPPRIS P3 TSL 5 BASIC18.87■□□□□ 0.61
ERGIC3Q9Y282 SMPD3-201ENST00000219334 5453 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
ERGIC3Q9Y282 PGP-201ENST00000333503 2727 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
ERGIC3Q9Y282 PTPRE-201ENST00000254667 5331 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
ERGIC3Q9Y282 LHX3-202ENST00000371748 2365 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
ERGIC3Q9Y282 PALM-207ENST00000590161 2137 ntTSL 4 BASIC18.86■□□□□ 0.61
ERGIC3Q9Y282 ZGPAT-206ENST00000448100 1881 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
ERGIC3Q9Y282 GRINA-202ENST00000395068 1814 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
ERGIC3Q9Y282 MAP1LC3A-201ENST00000360668 1574 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
ERGIC3Q9Y282 AC133637.1-201ENST00000624115 1537 ntBASIC18.86■□□□□ 0.61
ERGIC3Q9Y282 LEMD2-201ENST00000293760 2958 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
ERGIC3Q9Y282 FXYD3-201ENST00000344013 1404 ntTSL 5 BASIC18.86■□□□□ 0.61
ERGIC3Q9Y282 GUK1-208ENST00000366728 842 ntTSL 2 BASIC18.86■□□□□ 0.61
ERGIC3Q9Y282 MYD88-205ENST00000424893 1279 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
ERGIC3Q9Y282 ISYNA1-201ENST00000338128 2420 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
ERGIC3Q9Y282 NPLOC4-201ENST00000331134 4415 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
ERGIC3Q9Y282 SLC16A5-202ENST00000450736 2051 ntAPPRIS P2 TSL 1 (best) BASIC18.86■□□□□ 0.61
ERGIC3Q9Y282 SLC16A5-201ENST00000329783 1934 ntAPPRIS P2 TSL 1 (best) BASIC18.86■□□□□ 0.61
ERGIC3Q9Y282 BEST2-201ENST00000042931 1908 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
ERGIC3Q9Y282 AC003102.1-202ENST00000563394 1796 ntBASIC18.86■□□□□ 0.61
ERGIC3Q9Y282 TMEM259-209ENST00000592590 2509 ntTSL 5 BASIC18.85■□□□□ 0.61
ERGIC3Q9Y282 DMRT2-201ENST00000259622 2459 ntTSL 2 BASIC18.85■□□□□ 0.61
ERGIC3Q9Y282 NGEF-202ENST00000373552 2286 ntAPPRIS P1 TSL 2 BASIC18.85■□□□□ 0.61
ERGIC3Q9Y282 WT1-210ENST00000639563 1494 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
ERGIC3Q9Y282 CAPG-201ENST00000263867 1442 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
ERGIC3Q9Y282 KRT8P33-201ENST00000508125 1423 ntBASIC18.85■□□□□ 0.61
ERGIC3Q9Y282 PLEKHF1-204ENST00000592810 1357 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
ERGIC3Q9Y282 PLK5-205ENST00000642079 1969 ntBASIC18.85■□□□□ 0.61
ERGIC3Q9Y282 NAAA-201ENST00000286733 1900 ntAPPRIS P2 TSL 5 BASIC18.85■□□□□ 0.61
ERGIC3Q9Y282 TRIM7-202ENST00000334421 1228 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
ERGIC3Q9Y282 PRELID1-203ENST00000503216 1171 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
ERGIC3Q9Y282 AC138207.2-201ENST00000583377 492 ntTSL 2 BASIC18.85■□□□□ 0.61
ERGIC3Q9Y282 AL590094.1-201ENST00000635581 706 ntTSL 2 BASIC18.85■□□□□ 0.61
ERGIC3Q9Y282 ZDHHC20-203ENST00000400590 1869 ntAPPRIS ALT2 TSL 5 BASIC18.85■□□□□ 0.61
ERGIC3Q9Y282 PDCD2-203ENST00000443345 1897 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
ERGIC3Q9Y282 UNC5D-204ENST00000420357 2966 ntTSL 5 BASIC18.85■□□□□ 0.61
ERGIC3Q9Y282 COPS7A-222ENST00000626119 1768 ntTSL 3 BASIC18.85■□□□□ 0.61
ERGIC3Q9Y282 PIANP-201ENST00000320591 2323 ntAPPRIS P3 TSL 1 (best) BASIC18.85■□□□□ 0.61
ERGIC3Q9Y282 WT1-205ENST00000452863 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
ERGIC3Q9Y282 MFSD10-201ENST00000329687 2173 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
ERGIC3Q9Y282 ERF-202ENST00000440177 2032 ntTSL 2 BASIC18.84■□□□□ 0.61
ERGIC3Q9Y282 REPS1-203ENST00000409812 2511 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
ERGIC3Q9Y282 TRAPPC12-202ENST00000382110 2483 ntAPPRIS P2 TSL 2 BASIC18.84■□□□□ 0.61
ERGIC3Q9Y282 STX4-202ENST00000394998 1498 ntTSL 2 BASIC18.84■□□□□ 0.61
ERGIC3Q9Y282 ST3GAL4-213ENST00000530591 1459 ntAPPRIS P3 TSL 1 (best) BASIC18.84■□□□□ 0.61
ERGIC3Q9Y282 RBM38-205ENST00000440234 686 ntTSL 2 BASIC18.84■□□□□ 0.61
ERGIC3Q9Y282 AC026785.2-201ENST00000511821 867 ntTSL 2 BASIC18.84■□□□□ 0.61
ERGIC3Q9Y282 AL451085.2-201ENST00000605085 799 ntBASIC18.84■□□□□ 0.61
ERGIC3Q9Y282 AC241377.3-202ENST00000626088 1088 ntBASIC18.84■□□□□ 0.61
ERGIC3Q9Y282 AC241585.3-202ENST00000628937 1088 ntBASIC18.84■□□□□ 0.61
ERGIC3Q9Y282 AC245100.8-202ENST00000629247 1058 ntBASIC18.84■□□□□ 0.61
ERGIC3Q9Y282 LSM11-201ENST00000286307 6584 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
ERGIC3Q9Y282 SUSD1-203ENST00000374264 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
ERGIC3Q9Y282 ADAP2-204ENST00000580525 1598 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
ERGIC3Q9Y282 RAC1-201ENST00000348035 2323 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
ERGIC3Q9Y282 MB21D2-201ENST00000392452 3368 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
ERGIC3Q9Y282 CXCL16-201ENST00000293778 2222 ntAPPRIS P2 TSL 1 (best) BASIC18.84■□□□□ 0.61
ERGIC3Q9Y282 NFKBIL1-203ENST00000376148 1478 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
ERGIC3Q9Y282 PQLC2-201ENST00000375153 2153 ntAPPRIS P1 TSL 2 BASIC18.83■□□□□ 0.61
ERGIC3Q9Y282 TTC12-202ENST00000393020 2541 ntTSL 5 BASIC18.83■□□□□ 0.61
ERGIC3Q9Y282 CBFA2T2-201ENST00000342704 2864 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
ERGIC3Q9Y282 PCP4L1-201ENST00000504449 1424 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
ERGIC3Q9Y282 FAM120B-204ENST00000625626 1794 ntAPPRIS ALT2 TSL 2 BASIC18.83■□□□□ 0.61
ERGIC3Q9Y282 AP3S1-201ENST00000316788 1730 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
ERGIC3Q9Y282 SHANK3-203ENST00000445220 5175 ntAPPRIS ALT2 TSL 5 BASIC18.83■□□□□ 0.61
ERGIC3Q9Y282 ERI3-201ENST00000372257 1684 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
ERGIC3Q9Y282 ZNF12-201ENST00000342651 2921 ntAPPRIS ALT2 TSL 2 BASIC18.83■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 24.5 ms