Protein–RNA interactions for Protein: Q96PU5

NEDD4L, E3 ubiquitin-protein ligase NEDD4-like, humanhuman

Predictions only

Length 975 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4LQ96PU5 TMEM204-202ENST00000566264 1938 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
NEDD4LQ96PU5 COPS7A-222ENST00000626119 1768 ntTSL 3 BASIC18.27■□□□□ 0.52
NEDD4LQ96PU5 FAM110A-206ENST00000541082 1614 ntAPPRIS P1 TSL 3 BASIC18.27■□□□□ 0.52
NEDD4LQ96PU5 ST3GAL4-213ENST00000530591 1459 ntAPPRIS P3 TSL 1 (best) BASIC18.27■□□□□ 0.52
NEDD4LQ96PU5 LARGE2-206ENST00000529052 2459 ntAPPRIS ALT2 TSL 2 BASIC18.27■□□□□ 0.52
NEDD4LQ96PU5 EHBP1-209ENST00000431489 5076 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.52
NEDD4LQ96PU5 WWTR1-AS1-202ENST00000479752 1700 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
NEDD4LQ96PU5 AK3-203ENST00000447596 705 ntTSL 2 BASIC18.27■□□□□ 0.52
NEDD4LQ96PU5 CENPU-201ENST00000281453 1998 ntAPPRIS P2 TSL 1 (best) BASIC18.27■□□□□ 0.52
NEDD4LQ96PU5 SLC39A5-209ENST00000454355 1968 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
NEDD4LQ96PU5 GALNS-201ENST00000268695 2363 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
NEDD4LQ96PU5 FGFR3-210ENST00000613647 4438 ntTSL 5 BASIC18.27■□□□□ 0.51
NEDD4LQ96PU5 CACNA1B-206ENST00000371372 9790 ntAPPRIS P4 TSL 5 BASIC18.27■□□□□ 0.51
NEDD4LQ96PU5 RTN4-201ENST00000317610 2333 ntTSL 1 (best) BASIC18.27■□□□□ 0.51
NEDD4LQ96PU5 ARHGAP22-204ENST00000417247 2340 ntTSL 2 BASIC18.27■□□□□ 0.51
NEDD4LQ96PU5 UBE2F-201ENST00000272930 2009 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
NEDD4LQ96PU5 RAX2-201ENST00000555633 2414 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
NEDD4LQ96PU5 MAIP1-201ENST00000295079 1495 ntAPPRIS P2 TSL 2 BASIC18.26■□□□□ 0.51
NEDD4LQ96PU5 CALY-201ENST00000252939 2271 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
NEDD4LQ96PU5 GLRX3-201ENST00000331244 1302 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
NEDD4LQ96PU5 PKIG-206ENST00000372892 1338 ntAPPRIS P1 TSL 2 BASIC18.26■□□□□ 0.51
NEDD4LQ96PU5 AGPAT5-201ENST00000285518 3685 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
NEDD4LQ96PU5 CCDC106-207ENST00000591578 1592 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
NEDD4LQ96PU5 PIANP-201ENST00000320591 2323 ntAPPRIS P3 TSL 1 (best) BASIC18.26■□□□□ 0.51
NEDD4LQ96PU5 TMEM155-201ENST00000337677 2313 ntAPPRIS P2 TSL 1 (best) BASIC18.26■□□□□ 0.51
NEDD4LQ96PU5 NKX2-1-203ENST00000518149 2583 ntAPPRIS P1 TSL 5 BASIC18.26■□□□□ 0.51
NEDD4LQ96PU5 TMEM151B-201ENST00000438774 1140 ntAPPRIS ALT2 TSL 3 BASIC18.26■□□□□ 0.51
NEDD4LQ96PU5 AC004540.2-202ENST00000451264 508 ntTSL 2 BASIC18.26■□□□□ 0.51
NEDD4LQ96PU5 AC079089.2-201ENST00000531211 1277 ntBASIC18.26■□□□□ 0.51
NEDD4LQ96PU5 ACYP1-205ENST00000555463 789 ntTSL 2 BASIC18.26■□□□□ 0.51
NEDD4LQ96PU5 GPX4-213ENST00000622390 1002 ntTSL 5 BASIC18.26■□□□□ 0.51
NEDD4LQ96PU5 AC133637.1-201ENST00000624115 1537 ntBASIC18.26■□□□□ 0.51
NEDD4LQ96PU5 ARHGAP28-203ENST00000383472 2295 ntAPPRIS ALT2 TSL 5 BASIC18.26■□□□□ 0.51
NEDD4LQ96PU5 ZNF688-203ENST00000563276 1492 ntTSL 2 BASIC18.26■□□□□ 0.51
NEDD4LQ96PU5 CLINT1-207ENST00000523908 2346 ntAPPRIS ALT1 TSL 1 (best) BASIC18.26■□□□□ 0.51
NEDD4LQ96PU5 SLC25A43-201ENST00000217909 2783 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
NEDD4LQ96PU5 AC004408.2-201ENST00000623613 2777 ntBASIC18.25■□□□□ 0.51
NEDD4LQ96PU5 AC116562.4-201ENST00000641316 2276 ntBASIC18.25■□□□□ 0.51
NEDD4LQ96PU5 PCDHB14-202ENST00000624896 2367 ntTSL 2 BASIC18.25■□□□□ 0.51
NEDD4LQ96PU5 PCBP3-206ENST00000400314 2202 ntAPPRIS P2 TSL 5 BASIC18.25■□□□□ 0.51
NEDD4LQ96PU5 CLPSL2-202ENST00000403376 405 ntAPPRIS P3 TSL 1 (best) BASIC18.25■□□□□ 0.51
NEDD4LQ96PU5 UNC93B8-201ENST00000511903 705 ntBASIC18.25■□□□□ 0.51
NEDD4LQ96PU5 DOC2A-201ENST00000350119 2071 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
NEDD4LQ96PU5 SREBF2-209ENST00000612482 5365 ntTSL 5 BASIC18.25■□□□□ 0.51
NEDD4LQ96PU5 C3orf18-203ENST00000426034 2486 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
NEDD4LQ96PU5 GPSM1-201ENST00000291775 2114 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
NEDD4LQ96PU5 SNX4-201ENST00000251775 2513 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
NEDD4LQ96PU5 NR2F1-AS1-210ENST00000606739 1431 ntTSL 2 BASIC18.24■□□□□ 0.51
NEDD4LQ96PU5 RNF146-213ENST00000610153 2070 ntAPPRIS ALT1 TSL 2 BASIC18.24■□□□□ 0.51
NEDD4LQ96PU5 POLD2-202ENST00000406581 2158 ntAPPRIS P1 TSL 2 BASIC18.24■□□□□ 0.51
NEDD4LQ96PU5 FAM239A-202ENST00000438107 2155 ntTSL 5 BASIC18.24■□□□□ 0.51
NEDD4LQ96PU5 USP45-205ENST00000472914 1617 ntTSL 5 BASIC18.24■□□□□ 0.51
NEDD4LQ96PU5 SMPD1-201ENST00000342245 2452 ntAPPRIS ALT1 TSL 1 (best) BASIC18.24■□□□□ 0.51
NEDD4LQ96PU5 DUSP26-201ENST00000256261 1835 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
NEDD4LQ96PU5 TUB-201ENST00000299506 2019 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
NEDD4LQ96PU5 PNMT-201ENST00000269582 1253 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
NEDD4LQ96PU5 MYD88-205ENST00000424893 1279 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
NEDD4LQ96PU5 C14orf80-211ENST00000450383 1107 ntAPPRIS ALT2 TSL 5 BASIC18.24■□□□□ 0.51
NEDD4LQ96PU5 FAM66C-205ENST00000456135 1216 ntTSL 5 BASIC18.24■□□□□ 0.51
NEDD4LQ96PU5 CUL4A-209ENST00000488558 1111 ntTSL 3 BASIC18.24■□□□□ 0.51
NEDD4LQ96PU5 TSPAN17-204ENST00000503045 1019 ntTSL 5 BASIC18.24■□□□□ 0.51
NEDD4LQ96PU5 AP001267.3-203ENST00000554407 579 ntTSL 2 BASIC18.24■□□□□ 0.51
NEDD4LQ96PU5 AL451085.2-201ENST00000605085 799 ntBASIC18.24■□□□□ 0.51
NEDD4LQ96PU5 pRNA.6-201ENST00000610482 90 ntBASIC18.24■□□□□ 0.51
NEDD4LQ96PU5 pRNA.5-201ENST00000612139 90 ntBASIC18.24■□□□□ 0.51
NEDD4LQ96PU5 pRNA.11-201ENST00000618423 90 ntBASIC18.24■□□□□ 0.51
NEDD4LQ96PU5 pRNA.13-201ENST00000619112 90 ntBASIC18.24■□□□□ 0.51
NEDD4LQ96PU5 AL031602.1-201ENST00000633169 911 ntBASIC18.24■□□□□ 0.51
NEDD4LQ96PU5 SHMT1-203ENST00000354098 1656 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
NEDD4LQ96PU5 STARD10-213ENST00000538536 1678 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
NEDD4LQ96PU5 KRT9-201ENST00000246662 2290 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
NEDD4LQ96PU5 LAPTM4B-204ENST00000619747 2758 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
NEDD4LQ96PU5 GTSE1-AS1-202ENST00000623117 1518 ntBASIC18.23■□□□□ 0.51
NEDD4LQ96PU5 GMPPA-205ENST00000373917 1630 ntTSL 5 BASIC18.23■□□□□ 0.51
NEDD4LQ96PU5 IGFBP1-202ENST00000457280 1601 ntAPPRIS ALT2 TSL 5 BASIC18.23■□□□□ 0.51
NEDD4LQ96PU5 CPAMD8-202ENST00000388925 5355 ntTSL 5 BASIC18.23■□□□□ 0.51
NEDD4LQ96PU5 LAYN-202ENST00000375615 1836 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
NEDD4LQ96PU5 FAM69B-201ENST00000371691 2410 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
NEDD4LQ96PU5 ECHDC1-214ENST00000474289 2443 ntAPPRIS P3 TSL 5 BASIC18.23■□□□□ 0.51
NEDD4LQ96PU5 SCARF1-202ENST00000348987 2619 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
NEDD4LQ96PU5 DIP2A-203ENST00000435722 2760 ntTSL 2 BASIC18.23■□□□□ 0.51
NEDD4LQ96PU5 GATM-201ENST00000396659 2597 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
NEDD4LQ96PU5 CHRAC1-203ENST00000519533 1678 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
NEDD4LQ96PU5 AC074143.1-203ENST00000518227 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
NEDD4LQ96PU5 CREM-229ENST00000474362 1030 ntTSL 2 BASIC18.23■□□□□ 0.51
NEDD4LQ96PU5 BEST2-201ENST00000042931 1908 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
NEDD4LQ96PU5 NR1H2-204ENST00000593926 1828 ntAPPRIS P2 TSL 5 BASIC18.23■□□□□ 0.51
NEDD4LQ96PU5 OR7E47P-201ENST00000546390 1422 ntBASIC18.23■□□□□ 0.51
NEDD4LQ96PU5 AP000974.1-201ENST00000623909 2387 ntBASIC18.23■□□□□ 0.51
NEDD4LQ96PU5 PTPRJ-207ENST00000613246 7851 ntAPPRIS ALT2 TSL 5 BASIC18.23■□□□□ 0.51
NEDD4LQ96PU5 SPOCK3-215ENST00000510741 1963 ntAPPRIS ALT2 TSL 5 BASIC18.22■□□□□ 0.51
NEDD4LQ96PU5 UBP1-202ENST00000283629 4148 ntAPPRIS P3 TSL 1 (best) BASIC18.22■□□□□ 0.51
NEDD4LQ96PU5 ATPIF1-202ENST00000465645 1855 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
NEDD4LQ96PU5 HMCES-201ENST00000383463 2515 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
NEDD4LQ96PU5 PGM1-205ENST00000540265 2345 ntTSL 2 BASIC18.22■□□□□ 0.51
NEDD4LQ96PU5 SEPHS1-206ENST00000545675 2988 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
NEDD4LQ96PU5 PACSIN3-211ENST00000539589 2009 ntAPPRIS P1 TSL 2 BASIC18.22■□□□□ 0.51
NEDD4LQ96PU5 CERS1-202ENST00000542296 1947 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
NEDD4LQ96PU5 IKBKG-212ENST00000617207 1949 ntAPPRIS ALT1 TSL 3 BASIC18.22■□□□□ 0.51
NEDD4LQ96PU5 NAXE-202ENST00000368234 901 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 19.8 ms