Protein–RNA interactions for Protein: P52655

GTF2A1, Transcription initiation factor IIA subunit 1, humanhuman

Predicted RBP Predictions only

Length 376 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2A1P52655 ARHGAP35-201ENST00000404338 8889 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
GTF2A1P52655 YTHDC2-207ENST00000515883 2629 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
GTF2A1P52655 SPAST-202ENST00000345662 5116 ntAPPRIS ALT1 TSL 1 (best) BASIC20.29■□□□□ 0.84
GTF2A1P52655 ACBD4-204ENST00000431281 2026 ntTSL 5 BASIC20.29■□□□□ 0.84
GTF2A1P52655 CDKN1B-201ENST00000228872 2657 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
GTF2A1P52655 PRKCB-202ENST00000321728 2689 ntAPPRIS ALT1 TSL 1 (best) BASIC20.29■□□□□ 0.84
GTF2A1P52655 FNTA-208ENST00000529687 1950 ntTSL 2 BASIC20.29■□□□□ 0.84
GTF2A1P52655 TNFAIP2-201ENST00000333007 4175 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
GTF2A1P52655 TSR3-201ENST00000007390 1243 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
GTF2A1P52655 TEAD2-202ENST00000377214 2440 ntAPPRIS ALT1 TSL 2 BASIC20.29■□□□□ 0.84
GTF2A1P52655 RNF166-203ENST00000541206 2419 ntTSL 2 BASIC20.29■□□□□ 0.84
GTF2A1P52655 LEFTY2-202ENST00000420304 2085 ntTSL 2 BASIC20.29■□□□□ 0.84
GTF2A1P52655 SCARF2-203ENST00000623402 3248 ntAPPRIS P3 TSL 1 (best) BASIC20.29■□□□□ 0.84
GTF2A1P52655 PCDH7-201ENST00000361762 6403 ntAPPRIS P3 TSL 1 (best) BASIC20.29■□□□□ 0.84
GTF2A1P52655 CTSB-202ENST00000353047 3875 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
GTF2A1P52655 JPT1-206ENST00000476258 2289 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
GTF2A1P52655 LYN-202ENST00000519728 2297 ntAPPRIS P3 TSL 1 (best) BASIC20.29■□□□□ 0.84
GTF2A1P52655 RASL10A-201ENST00000216101 1490 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
GTF2A1P52655 SPATA18-202ENST00000419395 2816 ntTSL 2 BASIC20.29■□□□□ 0.84
GTF2A1P52655 SORCS3-201ENST00000369699 5530 ntAPPRIS P1 TSL 5 BASIC20.29■□□□□ 0.84
GTF2A1P52655 KCTD13-202ENST00000561540 1773 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
GTF2A1P52655 GNAS-AS1-202ENST00000443966 2341 ntTSL 5 BASIC20.28■□□□□ 0.84
GTF2A1P52655 ME2-216ENST00000639850 2331 ntTSL 5 BASIC20.28■□□□□ 0.84
GTF2A1P52655 THOP1-202ENST00000395212 1877 ntTSL 2 BASIC20.28■□□□□ 0.84
GTF2A1P52655 NAPRT-203ENST00000435154 1877 ntTSL 2 BASIC20.28■□□□□ 0.84
GTF2A1P52655 PMEPA1-202ENST00000341744 4845 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
GTF2A1P52655 ZBTB25-202ENST00000555220 1440 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
GTF2A1P52655 C3orf58-201ENST00000315691 4346 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
GTF2A1P52655 P2RY6-208ENST00000540124 2351 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
GTF2A1P52655 TRAF3-203ENST00000392745 2459 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
GTF2A1P52655 NAE1-202ENST00000359087 1825 ntTSL 2 BASIC20.28■□□□□ 0.84
GTF2A1P52655 MYO1D-213ENST00000583621 1916 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
GTF2A1P52655 RBBP7-202ENST00000380084 2036 ntTSL 2 BASIC20.28■□□□□ 0.84
GTF2A1P52655 SETD3-202ENST00000331768 2878 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
GTF2A1P52655 U2AF1L5-202ENST00000619610 813 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
GTF2A1P52655 SIRT1-201ENST00000212015 4094 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
GTF2A1P52655 ARHGAP26-201ENST00000274498 6862 ntAPPRIS P3 TSL 1 (best) BASIC20.28■□□□□ 0.84
GTF2A1P52655 MMP11-201ENST00000215743 2291 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
GTF2A1P52655 PDSS1-201ENST00000376215 1626 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
GTF2A1P52655 SLC41A3-202ENST00000346785 1705 ntTSL 2 BASIC20.27■□□□□ 0.84
GTF2A1P52655 PPP1R12B-212ENST00000480184 1808 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
GTF2A1P52655 VPS37B-201ENST00000267202 3028 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
GTF2A1P52655 EEPD1-201ENST00000242108 4765 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
GTF2A1P52655 AEBP1-206ENST00000450684 2571 ntTSL 2 BASIC20.27■□□□□ 0.84
GTF2A1P52655 TFCP2-204ENST00000548115 1862 ntTSL 5 BASIC20.27■□□□□ 0.84
GTF2A1P52655 HNRNPD-203ENST00000353341 1585 ntAPPRIS ALT1 TSL 1 (best) BASIC20.27■□□□□ 0.84
GTF2A1P52655 TRIM72-202ENST00000613872 1573 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
GTF2A1P52655 KRT18P10-201ENST00000388836 1287 ntBASIC20.27■□□□□ 0.84
GTF2A1P52655 AC016595.1-201ENST00000559410 383 ntTSL 3 BASIC20.27■□□□□ 0.84
GTF2A1P52655 AC026202.3-201ENST00000600805 1127 ntBASIC20.27■□□□□ 0.84
GTF2A1P52655 PARVG-206ENST00000444313 3523 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
GTF2A1P52655 KIAA1324L-207ENST00000444627 3527 ntTSL 5 BASIC20.27■□□□□ 0.84
GTF2A1P52655 SPAG9-202ENST00000357122 4761 ntAPPRIS P2 TSL 1 (best) BASIC20.27■□□□□ 0.84
GTF2A1P52655 ACSL6-205ENST00000379246 2622 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
GTF2A1P52655 NFATC4-218ENST00000554966 2506 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
GTF2A1P52655 NFATC4-225ENST00000556169 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
GTF2A1P52655 STX17-212ENST00000534052 2424 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
GTF2A1P52655 LIPG-203ENST00000577628 2323 ntTSL 2 BASIC20.27■□□□□ 0.84
GTF2A1P52655 ATXN7-210ENST00000487717 3683 ntAPPRIS P3 TSL 5 BASIC20.27■□□□□ 0.84
GTF2A1P52655 SSH3-202ENST00000308298 2046 ntTSL 2 BASIC20.27■□□□□ 0.84
GTF2A1P52655 QSOX2-201ENST00000358701 4530 ntAPPRIS P1 TSL 2 BASIC20.27■□□□□ 0.84
GTF2A1P52655 NFKBID-201ENST00000396901 1834 ntAPPRIS P2 TSL 1 (best) BASIC20.27■□□□□ 0.84
GTF2A1P52655 NFKBID-211ENST00000641389 1834 ntAPPRIS ALT2 BASIC20.27■□□□□ 0.84
GTF2A1P52655 DUSP15-201ENST00000278979 1732 ntTSL 2 BASIC20.27■□□□□ 0.83
GTF2A1P52655 RAB20-201ENST00000267328 1518 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
GTF2A1P52655 DTX2-211ENST00000446600 2281 ntTSL 2 BASIC20.27■□□□□ 0.83
GTF2A1P52655 AC112907.3-201ENST00000577781 2400 ntBASIC20.26■□□□□ 0.83
GTF2A1P52655 OPRD1-201ENST00000234961 9345 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
GTF2A1P52655 ATPAF1-214ENST00000576409 4158 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
GTF2A1P52655 ARL6IP4-210ENST00000453766 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
GTF2A1P52655 UNKL-204ENST00000389221 5116 ntAPPRIS ALT2 TSL 5 BASIC20.26■□□□□ 0.83
GTF2A1P52655 YTHDF3-212ENST00000621413 2370 ntTSL 5 BASIC20.26■□□□□ 0.83
GTF2A1P52655 GFER-205ENST00000569451 517 ntTSL 5 BASIC20.26■□□□□ 0.83
GTF2A1P52655 SRP68-213ENST00000629930 165 ntTSL 5 BASIC20.26■□□□□ 0.83
GTF2A1P52655 TANGO2-210ENST00000432883 2084 ntTSL 2 BASIC20.26■□□□□ 0.83
GTF2A1P52655 MAP6-201ENST00000304771 3334 ntAPPRIS P3 TSL 1 (best) BASIC20.26■□□□□ 0.83
GTF2A1P52655 DGKI-203ENST00000446122 4070 ntAPPRIS ALT2 TSL 5 BASIC20.26■□□□□ 0.83
GTF2A1P52655 KANSL2-212ENST00000550347 2714 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
GTF2A1P52655 PDE4D-204ENST00000358923 2969 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
GTF2A1P52655 ME2-206ENST00000638410 2289 ntTSL 5 BASIC20.25■□□□□ 0.83
GTF2A1P52655 ME2-210ENST00000639255 2262 ntTSL 5 BASIC20.25■□□□□ 0.83
GTF2A1P52655 NOV-201ENST00000259526 2522 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
GTF2A1P52655 RHBDD2-201ENST00000006777 1802 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
GTF2A1P52655 ENTPD4-201ENST00000356206 2097 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
GTF2A1P52655 ENTPD4-203ENST00000417069 2063 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
GTF2A1P52655 TMSB4X-203ENST00000380636 1702 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
GTF2A1P52655 POTEC-204ENST00000620346 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
GTF2A1P52655 PTPRJ-202ENST00000440289 3158 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
GTF2A1P52655 ARL4D-201ENST00000320033 1612 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
GTF2A1P52655 RIPPLY2-202ENST00000369689 664 ntAPPRIS P2 TSL 1 (best) BASIC20.25■□□□□ 0.83
GTF2A1P52655 PLEKHJ1-204ENST00000586608 935 ntTSL 3 BASIC20.25■□□□□ 0.83
GTF2A1P52655 NAT14-201ENST00000205194 1536 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
GTF2A1P52655 RGS9BP-201ENST00000334176 2894 ntAPPRIS P1 BASIC20.25■□□□□ 0.83
GTF2A1P52655 SPHK1-202ENST00000392496 1779 ntAPPRIS P3 TSL 1 (best) BASIC20.25■□□□□ 0.83
GTF2A1P52655 PACRGL-201ENST00000295290 1937 ntTSL 5 BASIC20.25■□□□□ 0.83
GTF2A1P52655 PTPA-201ENST00000337738 2845 ntTSL 2 BASIC20.25■□□□□ 0.83
GTF2A1P52655 KLHL31-201ENST00000370905 5743 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
GTF2A1P52655 NR6A1-201ENST00000344523 1846 ntAPPRIS ALT2 TSL 5 BASIC20.25■□□□□ 0.83
GTF2A1P52655 DALRD3-201ENST00000313778 1968 ntTSL 2 BASIC20.25■□□□□ 0.83
GTF2A1P52655 GALNS-201ENST00000268695 2363 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 59.2 ms