Protein–RNA interactions for Protein: P39905

GDNF, Glial cell line-derived neurotrophic factor, humanhuman

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GDNFP39905 ATP6V0E2-203ENST00000456496 2722 ntTSL 1 (best) BASIC18■□□□□ 0.47
GDNFP39905 ATP6V0E2-213ENST00000615196 2727 ntTSL 1 (best) BASIC18■□□□□ 0.47
GDNFP39905 C2CD4B-201ENST00000380392 1579 ntAPPRIS P1 TSL 2 BASIC18■□□□□ 0.47
GDNFP39905 FAM69B-202ENST00000371692 1668 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
GDNFP39905 FUT4-201ENST00000358752 6059 ntAPPRIS P1 BASIC18■□□□□ 0.47
GDNFP39905 UBAP1-204ENST00000625521 2029 ntTSL 2 BASIC18■□□□□ 0.47
GDNFP39905 AC027702.1-201ENST00000563810 1770 ntBASIC18■□□□□ 0.47
GDNFP39905 C1QTNF1-201ENST00000311661 2624 ntTSL 2 BASIC18■□□□□ 0.47
GDNFP39905 AC007009.1-201ENST00000458624 429 ntTSL 2 BASIC18■□□□□ 0.47
GDNFP39905 TYROBP-203ENST00000544690 522 ntTSL 1 (best) BASIC18■□□□□ 0.47
GDNFP39905 TGFBR3L-202ENST00000565886 1260 ntAPPRIS P1 TSL 5 BASIC18■□□□□ 0.47
GDNFP39905 PALM-207ENST00000590161 2137 ntTSL 4 BASIC18■□□□□ 0.47
GDNFP39905 AC011298.3-201ENST00000615796 283 ntBASIC18■□□□□ 0.47
GDNFP39905 AC136469.2-201ENST00000623944 1028 ntBASIC18■□□□□ 0.47
GDNFP39905 AL031602.1-201ENST00000633169 911 ntBASIC18■□□□□ 0.47
GDNFP39905 MARK1-203ENST00000402574 5273 ntTSL 1 (best) BASIC18■□□□□ 0.47
GDNFP39905 ZGPAT-203ENST00000357119 1896 ntTSL 1 (best) BASIC18■□□□□ 0.47
GDNFP39905 NGLY1-202ENST00000280700 2473 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
GDNFP39905 NHLRC1-201ENST00000340650 2248 ntAPPRIS P1 BASIC18■□□□□ 0.47
GDNFP39905 DOK1-201ENST00000233668 2555 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
GDNFP39905 UBE2Z-201ENST00000360943 3122 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
GDNFP39905 BRD4-202ENST00000360016 3240 ntAPPRIS ALT2 TSL 1 (best) BASIC18■□□□□ 0.47
GDNFP39905 STMN3-201ENST00000370053 2255 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
GDNFP39905 NGEF-202ENST00000373552 2286 ntAPPRIS P1 TSL 2 BASIC18■□□□□ 0.47
GDNFP39905 GRM5-202ENST00000305447 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC17.99■□□□□ 0.47
GDNFP39905 TERF1-202ENST00000276603 1677 ntAPPRIS P4 TSL 1 (best) BASIC17.99■□□□□ 0.47
GDNFP39905 C16orf59-201ENST00000361837 1662 ntAPPRIS P2 TSL 1 (best) BASIC17.99■□□□□ 0.47
GDNFP39905 ACP4-201ENST00000270593 1347 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
GDNFP39905 CXCL16-201ENST00000293778 2222 ntAPPRIS P2 TSL 1 (best) BASIC17.99■□□□□ 0.47
GDNFP39905 ALDH6A1-201ENST00000350259 1869 ntAPPRIS ALT2 TSL 2 BASIC17.99■□□□□ 0.47
GDNFP39905 LIMS2-207ENST00000409808 2315 ntAPPRIS ALT1 TSL 5 BASIC17.99■□□□□ 0.47
GDNFP39905 SAXO1-201ENST00000380530 1727 ntAPPRIS ALT2 TSL 2 BASIC17.99■□□□□ 0.47
GDNFP39905 PTMA-205ENST00000410064 814 ntTSL 2 BASIC17.99■□□□□ 0.47
GDNFP39905 AC096631.2-201ENST00000436136 790 ntBASIC17.99■□□□□ 0.47
GDNFP39905 OR2I1P-207ENST00000453522 948 ntBASIC17.99■□□□□ 0.47
GDNFP39905 AC004707.1-201ENST00000511627 715 ntTSL 3 BASIC17.99■□□□□ 0.47
GDNFP39905 CHTF8-208ENST00000522091 863 ntTSL 2 BASIC17.99■□□□□ 0.47
GDNFP39905 AC024257.2-201ENST00000549699 147 ntBASIC17.99■□□□□ 0.47
GDNFP39905 ZNF264-206ENST00000600531 774 ntTSL 2 BASIC17.99■□□□□ 0.47
GDNFP39905 SF1-220ENST00000626028 704 ntTSL 2 BASIC17.99■□□□□ 0.47
GDNFP39905 MAPK9-208ENST00000455781 4336 ntAPPRIS ALT1 TSL 2 BASIC17.99■□□□□ 0.47
GDNFP39905 UBE2F-201ENST00000272930 2009 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
GDNFP39905 HSD11B1L-218ENST00000581773 1687 ntAPPRIS P3 TSL 1 (best) BASIC17.99■□□□□ 0.47
GDNFP39905 LYSMD2-201ENST00000267838 1759 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
GDNFP39905 ISCA1-203ENST00000375991 1958 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
GDNFP39905 TPST2-202ENST00000398110 1968 ntAPPRIS P1 TSL 2 BASIC17.99■□□□□ 0.47
GDNFP39905 LINC01089-202ENST00000429892 1521 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
GDNFP39905 NAAA-201ENST00000286733 1900 ntAPPRIS P2 TSL 5 BASIC17.98■□□□□ 0.47
GDNFP39905 SUMO3-204ENST00000411651 1921 ntTSL 2 BASIC17.98■□□□□ 0.47
GDNFP39905 CSNK1D-203ENST00000392334 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC17.98■□□□□ 0.47
GDNFP39905 WDR4-202ENST00000398208 2122 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
GDNFP39905 RTN4RL2-201ENST00000335099 2203 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
GDNFP39905 RBM6-204ENST00000422955 2324 ntTSL 2 BASIC17.98■□□□□ 0.47
GDNFP39905 LYSMD4-210ENST00000545021 2431 ntTSL 4 BASIC17.98■□□□□ 0.47
GDNFP39905 C16orf95-201ENST00000253461 953 ntAPPRIS P3 TSL 1 (best) BASIC17.98■□□□□ 0.47
GDNFP39905 NAA38-201ENST00000333775 999 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
GDNFP39905 AL136162.1-201ENST00000607711 1078 ntBASIC17.98■□□□□ 0.47
GDNFP39905 STARD3NL-202ENST00000396013 1365 ntAPPRIS P1 TSL 5 BASIC17.98■□□□□ 0.47
GDNFP39905 CEBPE-201ENST00000206513 1554 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
GDNFP39905 BCL7A-201ENST00000261822 2581 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
GDNFP39905 ZFP69-202ENST00000372706 2871 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
GDNFP39905 TMEM214-203ENST00000404032 2830 ntTSL 2 BASIC17.98■□□□□ 0.47
GDNFP39905 SNX32-201ENST00000308342 2003 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
GDNFP39905 PACSIN3-211ENST00000539589 2009 ntAPPRIS P1 TSL 2 BASIC17.98■□□□□ 0.47
GDNFP39905 GRINA-202ENST00000395068 1814 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
GDNFP39905 FAM217A-201ENST00000274673 2265 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
GDNFP39905 MEIS3-202ENST00000441740 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
GDNFP39905 ARSA-205ENST00000453344 1650 ntTSL 2 BASIC17.97■□□□□ 0.47
GDNFP39905 MAP1LC3A-201ENST00000360668 1574 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
GDNFP39905 TTC12-202ENST00000393020 2541 ntTSL 5 BASIC17.97■□□□□ 0.47
GDNFP39905 SLC47A1P1-202ENST00000449666 945 ntBASIC17.97■□□□□ 0.47
GDNFP39905 CDKN3-207ENST00000543789 610 ntTSL 5 BASIC17.97■□□□□ 0.47
GDNFP39905 ACYP1-205ENST00000555463 789 ntTSL 2 BASIC17.97■□□□□ 0.47
GDNFP39905 MIR4767-201ENST00000582827 78 ntBASIC17.97■□□□□ 0.47
GDNFP39905 ERF-202ENST00000440177 2032 ntTSL 2 BASIC17.97■□□□□ 0.47
GDNFP39905 SEMA6B-202ENST00000586965 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
GDNFP39905 FGFR2-204ENST00000356226 3547 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
GDNFP39905 TSR1-201ENST00000301364 5188 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
GDNFP39905 HNRNPA3-204ENST00000435711 1731 ntAPPRIS P3 TSL 1 (best) BASIC17.97■□□□□ 0.47
GDNFP39905 AQP11-201ENST00000313578 2152 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
GDNFP39905 IMPA2-201ENST00000269159 1534 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
GDNFP39905 SLC39A5-209ENST00000454355 1968 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
GDNFP39905 RCN3-201ENST00000270645 1859 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
GDNFP39905 SLC12A4-202ENST00000422611 4670 ntTSL 2 BASIC17.96■□□□□ 0.47
GDNFP39905 CADPS-201ENST00000283269 4591 ntAPPRIS P4 TSL 1 (best) BASIC17.96■□□□□ 0.47
GDNFP39905 MIS18A-201ENST00000290130 1575 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
GDNFP39905 PRR16-202ENST00000407149 1747 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
GDNFP39905 DGKZ-203ENST00000421244 2862 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
GDNFP39905 C7orf49-213ENST00000617987 1727 ntTSL 5 BASIC17.96■□□□□ 0.47
GDNFP39905 HSD17B14-201ENST00000263278 1238 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
GDNFP39905 HES4-201ENST00000304952 899 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
GDNFP39905 LYPD2-201ENST00000359228 594 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
GDNFP39905 IL20RA-202ENST00000367746 1244 ntTSL 2 BASIC17.96■□□□□ 0.47
GDNFP39905 NRL-205ENST00000560550 788 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
GDNFP39905 DMRT2-205ENST00000382255 2367 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
GDNFP39905 SNCB-206ENST00000614675 1407 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
GDNFP39905 C7orf43-206ENST00000456769 2046 ntTSL 2 BASIC17.96■□□□□ 0.47
GDNFP39905 KCNQ5-201ENST00000342056 6688 ntAPPRIS ALT1 TSL 5 BASIC17.96■□□□□ 0.47
GDNFP39905 TMEM5-201ENST00000261234 1918 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
GDNFP39905 AC020907.5-201ENST00000624372 1936 ntBASIC17.96■□□□□ 0.47
Retrieved 100 of 98,524 protein–RNA pairs in 46.3 ms