Protein–RNA interactions for Protein: P13637

ATP1A3, Sodium/potassium-transporting ATPase subunit alpha-3, humanhuman

Predictions only

Length 1,013 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP1A3P13637 NSUN5-204ENST00000438747 1663 ntAPPRIS P4 TSL 1 (best) BASIC22.88■■□□□ 1.25
ATP1A3P13637 EXOC3-AS1-202ENST00000623673 1663 ntBASIC22.88■■□□□ 1.25
ATP1A3P13637 NDUFAF1-201ENST00000260361 1461 ntAPPRIS P1 TSL 1 (best) BASIC22.88■■□□□ 1.25
ATP1A3P13637 SRSF4-201ENST00000373795 2387 ntAPPRIS P2 TSL 1 (best) BASIC22.88■■□□□ 1.25
ATP1A3P13637 DNPH1-201ENST00000230431 657 ntAPPRIS P1 TSL 1 (best) BASIC22.88■■□□□ 1.25
ATP1A3P13637 ZNF32-202ENST00000395797 1201 ntAPPRIS P1 TSL 2 BASIC22.88■■□□□ 1.25
ATP1A3P13637 SERTAD4-AS1-202ENST00000475406 591 ntTSL 2 BASIC22.88■■□□□ 1.25
ATP1A3P13637 AC073934.1-201ENST00000490314 495 ntTSL 4 BASIC22.88■■□□□ 1.25
ATP1A3P13637 ACAP1-206ENST00000571471 320 ntTSL 2 BASIC22.88■■□□□ 1.25
ATP1A3P13637 AC012313.1-203ENST00000597980 570 ntTSL 4 BASIC22.88■■□□□ 1.25
ATP1A3P13637 AC105233.4-201ENST00000642045 216 ntBASIC22.88■■□□□ 1.25
ATP1A3P13637 SLC39A5-209ENST00000454355 1968 ntAPPRIS P1 TSL 1 (best) BASIC22.88■■□□□ 1.25
ATP1A3P13637 ADAMTS10-205ENST00000595838 2458 ntTSL 2 BASIC22.88■■□□□ 1.25
ATP1A3P13637 SUMO3-204ENST00000411651 1921 ntTSL 2 BASIC22.88■■□□□ 1.25
ATP1A3P13637 TMEM132A-202ENST00000453848 3346 ntAPPRIS ALT2 TSL 1 (best) BASIC22.88■■□□□ 1.25
ATP1A3P13637 ME3-202ENST00000393324 2240 ntAPPRIS P1 TSL 1 (best) BASIC22.88■■□□□ 1.25
ATP1A3P13637 NFYC-204ENST00000372653 1862 ntTSL 2 BASIC22.88■■□□□ 1.25
ATP1A3P13637 HS3ST4-201ENST00000331351 3203 ntAPPRIS P1 TSL 1 (best) BASIC22.87■■□□□ 1.25
ATP1A3P13637 NRP2-206ENST00000417189 2386 ntTSL 2 BASIC22.87■■□□□ 1.25
ATP1A3P13637 INPP1-202ENST00000392329 2162 ntAPPRIS P1 TSL 5 BASIC22.87■■□□□ 1.25
ATP1A3P13637 EOMES-202ENST00000449599 2829 ntTSL 1 (best) BASIC22.87■■□□□ 1.25
ATP1A3P13637 PRR7-201ENST00000323249 1480 ntAPPRIS P1 TSL 1 (best) BASIC22.87■■□□□ 1.25
ATP1A3P13637 NOC4L-201ENST00000330579 1632 ntAPPRIS P1 TSL 1 (best) BASIC22.87■■□□□ 1.25
ATP1A3P13637 NKX1-2-201ENST00000451024 3364 ntAPPRIS P1 TSL 5 BASIC22.87■■□□□ 1.25
ATP1A3P13637 GPAA1-201ENST00000355091 2078 ntAPPRIS P1 TSL 1 (best) BASIC22.87■■□□□ 1.25
ATP1A3P13637 NKX2-5-202ENST00000424406 1124 ntTSL 1 (best) BASIC22.87■■□□□ 1.25
ATP1A3P13637 AP003419.1-201ENST00000535922 470 ntTSL 3 BASIC22.87■■□□□ 1.25
ATP1A3P13637 AL355102.2-201ENST00000553811 600 ntAPPRIS P1 TSL 2 BASIC22.87■■□□□ 1.25
ATP1A3P13637 AC008764.7-201ENST00000593779 1081 ntBASIC22.87■■□□□ 1.25
ATP1A3P13637 SCN1B-203ENST00000595652 814 ntTSL 2 BASIC22.87■■□□□ 1.25
ATP1A3P13637 RTN4RL2-201ENST00000335099 2203 ntAPPRIS P1 TSL 1 (best) BASIC22.87■■□□□ 1.25
ATP1A3P13637 VPS29-206ENST00000549578 1523 ntAPPRIS P1 TSL 1 (best) BASIC22.87■■□□□ 1.25
ATP1A3P13637 ZNF282-203ENST00000479907 1815 ntTSL 2 BASIC22.87■■□□□ 1.25
ATP1A3P13637 CRTC1-203ENST00000594658 2384 ntTSL 1 (best) BASIC22.86■■□□□ 1.25
ATP1A3P13637 TRIM4-202ENST00000354241 1942 ntTSL 1 (best) BASIC22.86■■□□□ 1.25
ATP1A3P13637 LINC00682-201ENST00000498940 1625 ntTSL 3 BASIC22.86■■□□□ 1.25
ATP1A3P13637 HMCES-203ENST00000417226 1490 ntTSL 1 (best) BASIC22.86■■□□□ 1.25
ATP1A3P13637 KIRREL2-202ENST00000347900 2015 ntTSL 1 (best) BASIC22.86■■□□□ 1.25
ATP1A3P13637 PTOV1-212ENST00000599732 1577 ntAPPRIS P1 TSL 1 (best) BASIC22.86■■□□□ 1.25
ATP1A3P13637 URAD-201ENST00000332715 931 ntAPPRIS P1 TSL 5 BASIC22.86■■□□□ 1.25
ATP1A3P13637 LHPP-203ENST00000392757 840 ntTSL 3 BASIC22.86■■□□□ 1.25
ATP1A3P13637 ZFAS1-206ENST00000450535 1075 ntTSL 3 BASIC22.86■■□□□ 1.25
ATP1A3P13637 CCER2-201ENST00000571838 1057 ntAPPRIS P2 TSL 5 BASIC22.86■■□□□ 1.25
ATP1A3P13637 BACE2-201ENST00000328735 2824 ntTSL 1 (best) BASIC22.86■■□□□ 1.25
ATP1A3P13637 LGR4-201ENST00000379214 5206 ntAPPRIS P1 TSL 1 (best) BASIC22.86■■□□□ 1.25
ATP1A3P13637 STARD10-201ENST00000334805 1963 ntAPPRIS P1 TSL 1 (best) BASIC22.86■■□□□ 1.25
ATP1A3P13637 GALNS-201ENST00000268695 2363 ntAPPRIS P1 TSL 1 (best) BASIC22.86■■□□□ 1.25
ATP1A3P13637 CXCL16-201ENST00000293778 2222 ntAPPRIS P2 TSL 1 (best) BASIC22.86■■□□□ 1.25
ATP1A3P13637 YBX1-201ENST00000321358 1514 ntAPPRIS P1 TSL 1 (best) BASIC22.86■■□□□ 1.25
ATP1A3P13637 CORO1B-202ENST00000393893 1931 ntAPPRIS P1 TSL 5 BASIC22.86■■□□□ 1.25
ATP1A3P13637 DTX2-212ENST00000446820 1770 ntAPPRIS ALT2 TSL 1 (best) BASIC22.86■■□□□ 1.25
ATP1A3P13637 TOLLIP-201ENST00000263646 2283 ntTSL 5 BASIC22.85■■□□□ 1.25
ATP1A3P13637 NYX-202ENST00000378220 2297 ntAPPRIS P1 TSL 1 (best) BASIC22.85■■□□□ 1.25
ATP1A3P13637 SET-201ENST00000322030 2915 ntAPPRIS P1 TSL 1 (best) BASIC22.85■■□□□ 1.25
ATP1A3P13637 NRXN1-226ENST00000626899 2543 ntTSL 2 BASIC22.85■■□□□ 1.25
ATP1A3P13637 AC135279.3-201ENST00000610945 1311 ntBASIC22.85■■□□□ 1.25
ATP1A3P13637 PACSIN3-201ENST00000298838 1843 ntAPPRIS P1 TSL 1 (best) BASIC22.85■■□□□ 1.25
ATP1A3P13637 CIRBP-225ENST00000589710 1835 ntTSL 2 BASIC22.85■■□□□ 1.25
ATP1A3P13637 TMEM204-201ENST00000253934 1686 ntAPPRIS P1 TSL 1 (best) BASIC22.85■■□□□ 1.25
ATP1A3P13637 AC099778.1-201ENST00000568593 1911 ntBASIC22.85■■□□□ 1.25
ATP1A3P13637 KRTAP17-1-201ENST00000334202 779 ntAPPRIS P1 BASIC22.85■■□□□ 1.25
ATP1A3P13637 CDKN2A-206ENST00000494262 989 ntTSL 3 BASIC22.85■■□□□ 1.25
ATP1A3P13637 AICDA-202ENST00000537228 667 ntTSL 5 BASIC22.85■■□□□ 1.25
ATP1A3P13637 ZNF584-205ENST00000596281 575 ntTSL 2 BASIC22.85■■□□□ 1.25
ATP1A3P13637 SCARB2-219ENST00000639738 1517 ntTSL 5 BASIC22.85■■□□□ 1.25
ATP1A3P13637 FAM189B-201ENST00000350210 2379 ntTSL 1 (best) BASIC22.85■■□□□ 1.25
ATP1A3P13637 BID-204ENST00000399767 2129 ntTSL 2 BASIC22.85■■□□□ 1.25
ATP1A3P13637 PFKFB3-219ENST00000640683 2311 ntTSL 5 BASIC22.85■■□□□ 1.25
ATP1A3P13637 SLC30A5-201ENST00000380860 1317 ntTSL 1 (best) BASIC22.84■■□□□ 1.25
ATP1A3P13637 TSPY26P-201ENST00000476365 1326 ntBASIC22.84■■□□□ 1.25
ATP1A3P13637 PATZ1-201ENST00000215919 2516 ntTSL 1 (best) BASIC22.84■■□□□ 1.25
ATP1A3P13637 PDZD3-201ENST00000322712 2204 ntTSL 1 (best) BASIC22.84■■□□□ 1.25
ATP1A3P13637 MAPK15-201ENST00000338033 1961 ntAPPRIS P1 TSL 1 (best) BASIC22.84■■□□□ 1.25
ATP1A3P13637 IL20RA-202ENST00000367746 1244 ntTSL 2 BASIC22.84■■□□□ 1.25
ATP1A3P13637 FXN-202ENST00000396364 980 ntTSL 5 BASIC22.84■■□□□ 1.25
ATP1A3P13637 MAST4-205ENST00000406039 717 ntTSL 1 (best) BASIC22.84■■□□□ 1.25
ATP1A3P13637 HSPE1-203ENST00000409729 478 ntTSL 2 BASIC22.84■■□□□ 1.25
ATP1A3P13637 AC099791.1-201ENST00000416440 715 ntBASIC22.84■■□□□ 1.25
ATP1A3P13637 NRL-205ENST00000560550 788 ntTSL 1 (best) BASIC22.84■■□□□ 1.25
ATP1A3P13637 C16orf70-201ENST00000219139 2865 ntAPPRIS P1 TSL 1 (best) BASIC22.84■■□□□ 1.25
ATP1A3P13637 MRGPRF-201ENST00000309099 2295 ntAPPRIS P1 TSL 1 (best) BASIC22.84■■□□□ 1.25
ATP1A3P13637 BZW1-202ENST00000409226 2455 ntTSL 2 BASIC22.84■■□□□ 1.25
ATP1A3P13637 ISYNA1-201ENST00000338128 2420 ntAPPRIS P1 TSL 1 (best) BASIC22.83■■□□□ 1.25
ATP1A3P13637 C22orf39-206ENST00000611555 1977 ntTSL 1 (best) BASIC22.83■■□□□ 1.25
ATP1A3P13637 UBAP1-204ENST00000625521 2029 ntTSL 2 BASIC22.83■■□□□ 1.25
ATP1A3P13637 DGKZ-203ENST00000421244 2862 ntAPPRIS ALT2 TSL 1 (best) BASIC22.83■■□□□ 1.25
ATP1A3P13637 KRTAP5-1-201ENST00000382171 942 ntAPPRIS P1 BASIC22.83■■□□□ 1.25
ATP1A3P13637 TMEM179B-205ENST00000533861 797 ntTSL 5 BASIC22.83■■□□□ 1.25
ATP1A3P13637 SCO2-204ENST00000543927 1051 ntAPPRIS P1 TSL 2 BASIC22.83■■□□□ 1.25
ATP1A3P13637 AC061975.6-201ENST00000579045 1553 ntBASIC22.83■■□□□ 1.25
ATP1A3P13637 ADRA1B-201ENST00000306675 2047 ntAPPRIS P1 TSL 1 (best) BASIC22.82■■□□□ 1.24
ATP1A3P13637 HAND2-AS1-237ENST00000616485 2420 ntTSL 2 BASIC22.82■■□□□ 1.24
ATP1A3P13637 SOX2-201ENST00000325404 2513 ntAPPRIS P1 BASIC22.82■■□□□ 1.24
ATP1A3P13637 CAPN12-201ENST00000328867 2762 ntAPPRIS P1 TSL 1 (best) BASIC22.82■■□□□ 1.24
ATP1A3P13637 CCDC47-202ENST00000403162 2195 ntAPPRIS P1 TSL 2 BASIC22.82■■□□□ 1.24
ATP1A3P13637 TMCO6-203ENST00000394671 1887 ntAPPRIS P1 TSL 2 BASIC22.82■■□□□ 1.24
ATP1A3P13637 COPS7A-222ENST00000626119 1768 ntTSL 3 BASIC22.82■■□□□ 1.24
ATP1A3P13637 AC006538.2-201ENST00000586572 543 ntAPPRIS P1 TSL 4 BASIC22.82■■□□□ 1.24
ATP1A3P13637 MADCAM1-208ENST00000621286 1203 ntAPPRIS ALT2 TSL 5 BASIC22.82■■□□□ 1.24
ATP1A3P13637 BAG1-212ENST00000641048 1038 ntAPPRIS P3 BASIC22.82■■□□□ 1.24
Retrieved 100 of 98,524 protein–RNA pairs in 22.4 ms