Protein–RNA interactions for Protein: O43805

SSNA1, Sjoegren syndrome nuclear autoantigen 1, humanhuman

Predictions only

Length 119 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSNA1O43805 LSM7-203ENST00000585409 512 ntTSL 2 BASIC17.67■□□□□ 0.42
SSNA1O43805 FXYD7-204ENST00000588265 636 ntTSL 2 BASIC17.67■□□□□ 0.42
SSNA1O43805 TMEM155-201ENST00000337677 2313 ntAPPRIS P2 TSL 1 (best) BASIC17.67■□□□□ 0.42
SSNA1O43805 AP000974.1-201ENST00000623909 2387 ntBASIC17.67■□□□□ 0.42
SSNA1O43805 TANGO2-202ENST00000398042 2011 ntTSL 2 BASIC17.67■□□□□ 0.42
SSNA1O43805 NAE1-204ENST00000394074 1654 ntTSL 5 BASIC17.67■□□□□ 0.42
SSNA1O43805 MARK2-201ENST00000350490 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
SSNA1O43805 MAPK8IP3-201ENST00000250894 5661 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
SSNA1O43805 ING5-201ENST00000313552 5196 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
SSNA1O43805 NR2F2-204ENST00000453270 1712 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
SSNA1O43805 PLPP1-202ENST00000307259 1597 ntAPPRIS ALT1 TSL 1 (best) BASIC17.66■□□□□ 0.42
SSNA1O43805 MAP1LC3A-201ENST00000360668 1574 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
SSNA1O43805 ESPN-216ENST00000636330 4731 ntAPPRIS ALT2 TSL 5 BASIC17.66■□□□□ 0.42
SSNA1O43805 REPS1-203ENST00000409812 2511 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
SSNA1O43805 AC245041.2-204ENST00000610809 1962 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
SSNA1O43805 TMEM44-203ENST00000381975 2197 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
SSNA1O43805 SH3RF3-AS1-201ENST00000567491 1604 ntBASIC17.66■□□□□ 0.42
SSNA1O43805 AC004408.2-201ENST00000623613 2777 ntBASIC17.66■□□□□ 0.42
SSNA1O43805 MTMR1-208ENST00000445323 4516 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
SSNA1O43805 XKR6-203ENST00000416569 3382 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
SSNA1O43805 KRT8-217ENST00000619952 2437 ntTSL 2 BASIC17.66■□□□□ 0.42
SSNA1O43805 MPC1-201ENST00000341756 976 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
SSNA1O43805 C1orf122-201ENST00000373042 973 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
SSNA1O43805 ASB1-202ENST00000409297 878 ntTSL 5 BASIC17.66■□□□□ 0.42
SSNA1O43805 AC092807.3-205ENST00000467666 531 ntTSL 3 BASIC17.66■□□□□ 0.42
SSNA1O43805 MPC1-206ENST00000621630 977 ntAPPRIS ALT1 TSL 5 BASIC17.66■□□□□ 0.42
SSNA1O43805 MPC1-207ENST00000621685 1192 ntTSL 5 BASIC17.66■□□□□ 0.42
SSNA1O43805 PRSS23-201ENST00000280258 4015 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
SSNA1O43805 DUSP2-201ENST00000288943 1688 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
SSNA1O43805 CALY-201ENST00000252939 2271 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
SSNA1O43805 C3orf18-203ENST00000426034 2486 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
SSNA1O43805 SLC27A1-204ENST00000598424 2681 ntTSL 2 BASIC17.66■□□□□ 0.42
SSNA1O43805 DMRTA1-201ENST00000325870 5569 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
SSNA1O43805 FAM213A-202ENST00000372185 1723 ntTSL 2 BASIC17.66■□□□□ 0.42
SSNA1O43805 PLEKHJ1-206ENST00000587962 1311 ntTSL 2 BASIC17.66■□□□□ 0.42
SSNA1O43805 TBX18-202ENST00000369663 6245 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
SSNA1O43805 PHF12-205ENST00000577226 7679 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
SSNA1O43805 ZNF839-202ENST00000442396 2987 ntAPPRIS P3 TSL 5 BASIC17.66■□□□□ 0.42
SSNA1O43805 EDA-203ENST00000374552 5278 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
SSNA1O43805 NBL1-209ENST00000548815 1953 ntAPPRIS P3 TSL 3 BASIC17.66■□□□□ 0.42
SSNA1O43805 TANGO2-217ENST00000456048 2439 ntTSL 2 BASIC17.66■□□□□ 0.42
SSNA1O43805 COMMD5-201ENST00000305103 1373 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
SSNA1O43805 CASP9-203ENST00000375890 1351 ntTSL 2 BASIC17.66■□□□□ 0.42
SSNA1O43805 CASD1-201ENST00000297273 3942 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
SSNA1O43805 PTRH1-204ENST00000419060 2692 ntAPPRIS P1 TSL 2 BASIC17.65■□□□□ 0.42
SSNA1O43805 SMPD2-201ENST00000258052 1645 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
SSNA1O43805 IDH1-205ENST00000446179 2298 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
SSNA1O43805 PAQR4-203ENST00000572687 2251 ntTSL 2 BASIC17.65■□□□□ 0.42
SSNA1O43805 HSPBP1-206ENST00000587922 1449 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
SSNA1O43805 HTRA3-201ENST00000307358 2541 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
SSNA1O43805 SOGA3-203ENST00000525778 4077 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
SSNA1O43805 FAM69B-202ENST00000371692 1668 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
SSNA1O43805 PEX5-204ENST00000412720 2105 ntTSL 2 BASIC17.65■□□□□ 0.42
SSNA1O43805 NETO1-207ENST00000583169 2357 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
SSNA1O43805 BEST2-201ENST00000042931 1908 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
SSNA1O43805 CTU2-210ENST00000567949 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
SSNA1O43805 CENPS-CORT-201ENST00000400900 1469 ntTSL 2 BASIC17.65■□□□□ 0.42
SSNA1O43805 GABBR1-204ENST00000377016 4299 ntTSL 5 BASIC17.65■□□□□ 0.42
SSNA1O43805 MYDGF-201ENST00000262947 1018 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
SSNA1O43805 SPCS2P3-201ENST00000500401 656 ntBASIC17.65■□□□□ 0.42
SSNA1O43805 MIR6765-201ENST00000614092 87 ntBASIC17.65■□□□□ 0.42
SSNA1O43805 DALRD3-201ENST00000313778 1968 ntTSL 2 BASIC17.65■□□□□ 0.42
SSNA1O43805 CBWD1-203ENST00000377400 1792 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
SSNA1O43805 ACBD4-204ENST00000431281 2026 ntTSL 5 BASIC17.65■□□□□ 0.42
SSNA1O43805 ERF-202ENST00000440177 2032 ntTSL 2 BASIC17.65■□□□□ 0.42
SSNA1O43805 PKM-215ENST00000565154 2004 ntAPPRIS ALT1 TSL 2 BASIC17.65■□□□□ 0.42
SSNA1O43805 HLA-C-203ENST00000383329 1554 ntAPPRIS ALT2 BASIC17.65■□□□□ 0.42
SSNA1O43805 SYNGR2-203ENST00000588282 1553 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
SSNA1O43805 ACBD4-201ENST00000321854 1806 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
SSNA1O43805 NDOR1-204ENST00000458322 1829 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
SSNA1O43805 SPRED3-201ENST00000338502 4778 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
SSNA1O43805 CNOT11-201ENST00000289382 2599 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
SSNA1O43805 PRKCD-202ENST00000394729 2810 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
SSNA1O43805 GRAMD2B-219ENST00000544396 2822 ntTSL 2 BASIC17.65■□□□□ 0.42
SSNA1O43805 RAX2-201ENST00000555633 2414 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
SSNA1O43805 HERPUD2-201ENST00000311350 2474 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
SSNA1O43805 SMPD1-201ENST00000342245 2452 ntAPPRIS ALT1 TSL 1 (best) BASIC17.64■□□□□ 0.42
SSNA1O43805 EFR3A-201ENST00000254624 5438 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
SSNA1O43805 KCNA7-201ENST00000221444 4372 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
SSNA1O43805 SEMA3C-201ENST00000265361 5174 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
SSNA1O43805 CREB3L3-205ENST00000602257 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
SSNA1O43805 TNXA-203ENST00000507684 2038 ntBASIC17.64■□□□□ 0.41
SSNA1O43805 RTN4-201ENST00000317610 2333 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
SSNA1O43805 ARHGAP22-204ENST00000417247 2340 ntTSL 2 BASIC17.64■□□□□ 0.41
SSNA1O43805 FGFR3-205ENST00000440486 4287 ntAPPRIS P3 TSL 5 BASIC17.64■□□□□ 0.41
SSNA1O43805 HSPB11-201ENST00000194214 915 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
SSNA1O43805 GAL3ST3-201ENST00000312006 2133 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
SSNA1O43805 SOWAHC-201ENST00000356454 4657 ntAPPRIS P1 BASIC17.64■□□□□ 0.41
SSNA1O43805 SERBP1-201ENST00000361219 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC17.64■□□□□ 0.41
SSNA1O43805 AC009531.1-201ENST00000442323 580 ntTSL 4 BASIC17.64■□□□□ 0.41
SSNA1O43805 LHX9-206ENST00000561173 2144 ntTSL 5 BASIC17.64■□□□□ 0.41
SSNA1O43805 AC013394.1-201ENST00000629685 808 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.41
SSNA1O43805 ARHGAP11A-208ENST00000567348 2422 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
SSNA1O43805 RCN3-201ENST00000270645 1859 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
SSNA1O43805 RXFP3-201ENST00000330120 1852 ntAPPRIS P1 BASIC17.64■□□□□ 0.41
SSNA1O43805 LINC00304-201ENST00000321214 2243 ntTSL 2 BASIC17.64■□□□□ 0.41
SSNA1O43805 AGPAT3-201ENST00000291572 5546 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
SSNA1O43805 ADCY9-201ENST00000294016 7725 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
SSNA1O43805 TFEB-211ENST00000420312 1996 ntTSL 5 BASIC17.64■□□□□ 0.41
SSNA1O43805 EHMT1-236ENST00000637161 5049 ntAPPRIS ALT2 TSL 5 BASIC17.64■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 25.5 ms