Protein–RNA interactions for Protein: A0A0A6YYK6

TRAV16, T-cell receptor alpha variable 16 (Fragment), humanhuman

Predicted RBP Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV16A0A0A6YYK6 CTU2-201ENST00000312060 1672 ntAPPRIS P3 TSL 5 BASIC14.4□□□□□ -0.1
TRAV16A0A0A6YYK6 NEUROG1-201ENST00000314744 1668 ntAPPRIS P1 BASIC14.4□□□□□ -0.1
TRAV16A0A0A6YYK6 B3GALT4-204ENST00000451237 1694 ntAPPRIS P1 BASIC14.4□□□□□ -0.1
TRAV16A0A0A6YYK6 ST3GAL4-213ENST00000530591 1459 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
TRAV16A0A0A6YYK6 ECHDC1-203ENST00000368291 1354 ntTSL 2 BASIC14.4□□□□□ -0.1
TRAV16A0A0A6YYK6 NHLRC1-201ENST00000340650 2248 ntAPPRIS P1 BASIC14.4□□□□□ -0.1
TRAV16A0A0A6YYK6 SENP2-201ENST00000296257 5717 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
TRAV16A0A0A6YYK6 SPRED3-201ENST00000338502 4778 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
TRAV16A0A0A6YYK6 PLK5-201ENST00000334770 2106 ntAPPRIS P2 TSL 2 BASIC14.4□□□□□ -0.1
TRAV16A0A0A6YYK6 CCDC107-203ENST00000378407 899 ntAPPRIS ALT2 TSL 2 BASIC14.4□□□□□ -0.1
TRAV16A0A0A6YYK6 ZNF32-202ENST00000395797 1201 ntAPPRIS P1 TSL 2 BASIC14.4□□□□□ -0.1
TRAV16A0A0A6YYK6 HES6-206ENST00000409574 738 ntTSL 2 BASIC14.4□□□□□ -0.1
TRAV16A0A0A6YYK6 TGFBR3L-202ENST00000565886 1260 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.1
TRAV16A0A0A6YYK6 AC011298.3-201ENST00000615796 283 ntBASIC14.4□□□□□ -0.1
TRAV16A0A0A6YYK6 AC138696.1-201ENST00000522452 2897 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
TRAV16A0A0A6YYK6 SLC6A17-201ENST00000331565 6427 ntAPPRIS P1 TSL 2 BASIC14.4□□□□□ -0.1
TRAV16A0A0A6YYK6 TUBGCP3-204ENST00000464139 2461 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
TRAV16A0A0A6YYK6 PHF12-205ENST00000577226 7679 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
TRAV16A0A0A6YYK6 KBTBD11-201ENST00000320248 6710 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
TRAV16A0A0A6YYK6 ZPBP2-201ENST00000348931 1543 ntAPPRIS P4 TSL 1 (best) BASIC14.4□□□□□ -0.1
TRAV16A0A0A6YYK6 AC133637.1-201ENST00000624115 1537 ntBASIC14.4□□□□□ -0.1
TRAV16A0A0A6YYK6 ATP2A2-201ENST00000308664 4453 ntAPPRIS ALT1 TSL 1 (best) BASIC14.4□□□□□ -0.1
TRAV16A0A0A6YYK6 SDHAF3-202ENST00000432641 2060 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
TRAV16A0A0A6YYK6 AC087289.5-201ENST00000586076 3175 ntBASIC14.4□□□□□ -0.1
TRAV16A0A0A6YYK6 AC016065.1-201ENST00000500118 2413 ntTSL 2 BASIC14.4□□□□□ -0.1
TRAV16A0A0A6YYK6 CCDC151-201ENST00000356392 2107 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
TRAV16A0A0A6YYK6 FBXL19-207ENST00000565690 2570 ntAPPRIS ALT2 TSL 5 BASIC14.39□□□□□ -0.11
TRAV16A0A0A6YYK6 STK10-201ENST00000176763 6060 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
TRAV16A0A0A6YYK6 IRF3-207ENST00000593922 1494 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
TRAV16A0A0A6YYK6 TRABD2A-201ENST00000335459 1844 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
TRAV16A0A0A6YYK6 FAM66B-202ENST00000606573 2630 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
TRAV16A0A0A6YYK6 RABL2B-206ENST00000395598 2169 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
TRAV16A0A0A6YYK6 FAM53A-202ENST00000461064 2159 ntAPPRIS P1 TSL 2 BASIC14.39□□□□□ -0.11
TRAV16A0A0A6YYK6 CASP9-203ENST00000375890 1351 ntTSL 2 BASIC14.39□□□□□ -0.11
TRAV16A0A0A6YYK6 ITGB5-201ENST00000296181 4372 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
TRAV16A0A0A6YYK6 MGAT4B-201ENST00000292591 2446 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
TRAV16A0A0A6YYK6 TYROBP-203ENST00000544690 522 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
TRAV16A0A0A6YYK6 STX6-201ENST00000258301 4851 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
TRAV16A0A0A6YYK6 WTAP-201ENST00000337387 1622 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
TRAV16A0A0A6YYK6 LIMS2-207ENST00000409808 2315 ntAPPRIS ALT1 TSL 5 BASIC14.39□□□□□ -0.11
TRAV16A0A0A6YYK6 TSNAXIP1-202ENST00000415766 2338 ntAPPRIS ALT2 TSL 2 BASIC14.39□□□□□ -0.11
TRAV16A0A0A6YYK6 RASGEF1C-201ENST00000361132 2243 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
TRAV16A0A0A6YYK6 FIP1L1-201ENST00000306932 1878 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
TRAV16A0A0A6YYK6 PSKH1-202ENST00000570631 1509 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
TRAV16A0A0A6YYK6 MAPK9-207ENST00000452135 4815 ntAPPRIS P5 TSL 5 BASIC14.39□□□□□ -0.11
TRAV16A0A0A6YYK6 FAM206A-201ENST00000322940 2134 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
TRAV16A0A0A6YYK6 CITED2-202ENST00000536159 1797 ntAPPRIS P1 TSL 3 BASIC14.39□□□□□ -0.11
TRAV16A0A0A6YYK6 ATP6V0E2-203ENST00000456496 2722 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
TRAV16A0A0A6YYK6 ATP6V0E2-213ENST00000615196 2727 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
TRAV16A0A0A6YYK6 PHC1-212ENST00000543824 4292 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
TRAV16A0A0A6YYK6 CARMIL2-201ENST00000334583 4687 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
TRAV16A0A0A6YYK6 CCDC166-201ENST00000542437 1320 ntAPPRIS P1 TSL 2 BASIC14.39□□□□□ -0.11
TRAV16A0A0A6YYK6 TMEM214-203ENST00000404032 2830 ntTSL 2 BASIC14.38□□□□□ -0.11
TRAV16A0A0A6YYK6 ZSWIM8-223ENST00000605216 6004 ntAPPRIS P2 TSL 1 (best) BASIC14.38□□□□□ -0.11
TRAV16A0A0A6YYK6 CACNA1A-227ENST00000636549 6792 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
TRAV16A0A0A6YYK6 RNF38-205ENST00000377877 1974 ntTSL 2 BASIC14.38□□□□□ -0.11
TRAV16A0A0A6YYK6 HCN1-201ENST00000303230 9885 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
TRAV16A0A0A6YYK6 H1FX-201ENST00000333762 1507 ntAPPRIS P1 BASIC14.38□□□□□ -0.11
TRAV16A0A0A6YYK6 PYCARD-201ENST00000247470 990 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
TRAV16A0A0A6YYK6 KRTAP5-1-201ENST00000382171 942 ntAPPRIS P1 BASIC14.38□□□□□ -0.11
TRAV16A0A0A6YYK6 MYD88-205ENST00000424893 1279 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
TRAV16A0A0A6YYK6 CDKN3-207ENST00000543789 610 ntTSL 5 BASIC14.38□□□□□ -0.11
TRAV16A0A0A6YYK6 MIR3181-201ENST00000578512 73 ntBASIC14.38□□□□□ -0.11
TRAV16A0A0A6YYK6 ZNF584-205ENST00000596281 575 ntTSL 2 BASIC14.38□□□□□ -0.11
TRAV16A0A0A6YYK6 KRTAP5-4-202ENST00000616115 660 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
TRAV16A0A0A6YYK6 SHISA9-205ENST00000639941 1135 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
TRAV16A0A0A6YYK6 GPR62-201ENST00000322241 2191 ntAPPRIS P1 BASIC14.38□□□□□ -0.11
TRAV16A0A0A6YYK6 NR2F1-AS1-210ENST00000606739 1431 ntTSL 2 BASIC14.38□□□□□ -0.11
TRAV16A0A0A6YYK6 BHLHE22-201ENST00000321870 3262 ntAPPRIS P1 BASIC14.38□□□□□ -0.11
TRAV16A0A0A6YYK6 PLPP1-201ENST00000264775 1550 ntAPPRIS P4 TSL 1 (best) BASIC14.38□□□□□ -0.11
TRAV16A0A0A6YYK6 SDC3-202ENST00000339394 1580 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
TRAV16A0A0A6YYK6 SCAND1-202ENST00000373991 1727 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
TRAV16A0A0A6YYK6 ADCY8-201ENST00000286355 5938 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
TRAV16A0A0A6YYK6 RARRES2-202ENST00000466675 1618 ntAPPRIS P1 TSL 2 BASIC14.37□□□□□ -0.11
TRAV16A0A0A6YYK6 RBM42-203ENST00000588161 1609 ntAPPRIS ALT1 TSL 1 (best) BASIC14.37□□□□□ -0.11
TRAV16A0A0A6YYK6 TMPRSS5-212ENST00000545579 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
TRAV16A0A0A6YYK6 LYSMD2-201ENST00000267838 1759 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
TRAV16A0A0A6YYK6 CBWD5-207ENST00000382405 1791 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
TRAV16A0A0A6YYK6 ARID3A-201ENST00000263620 5941 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
TRAV16A0A0A6YYK6 RAB11FIP5-201ENST00000258098 4342 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
TRAV16A0A0A6YYK6 STK19-201ENST00000375331 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
TRAV16A0A0A6YYK6 RAB5A-201ENST00000273047 2536 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
TRAV16A0A0A6YYK6 DISC1-204ENST00000366633 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
TRAV16A0A0A6YYK6 DISC1-214ENST00000539444 2658 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
TRAV16A0A0A6YYK6 LKAAEAR1-201ENST00000302096 761 ntAPPRIS ALT2 TSL 2 BASIC14.37□□□□□ -0.11
TRAV16A0A0A6YYK6 LKAAEAR1-202ENST00000308906 868 ntAPPRIS P2 TSL 1 (best) BASIC14.37□□□□□ -0.11
TRAV16A0A0A6YYK6 DCTPP1-201ENST00000319285 1222 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
TRAV16A0A0A6YYK6 UBE2C-202ENST00000335046 737 ntTSL 2 BASIC14.37□□□□□ -0.11
TRAV16A0A0A6YYK6 PRICKLE4-201ENST00000394259 939 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
TRAV16A0A0A6YYK6 PCGF3-202ENST00000400151 1175 ntTSL 2 BASIC14.37□□□□□ -0.11
TRAV16A0A0A6YYK6 HM13-AS1-201ENST00000412178 489 ntTSL 3 BASIC14.37□□□□□ -0.11
TRAV16A0A0A6YYK6 AC006455.2-201ENST00000429931 906 ntBASIC14.37□□□□□ -0.11
TRAV16A0A0A6YYK6 SNAI3-AS1-201ENST00000563261 998 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
TRAV16A0A0A6YYK6 AC087239.1-201ENST00000622671 572 ntBASIC14.37□□□□□ -0.11
TRAV16A0A0A6YYK6 AC093762.1-201ENST00000641981 837 ntAPPRIS P1 BASIC14.37□□□□□ -0.11
TRAV16A0A0A6YYK6 STMN3-201ENST00000370053 2255 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
TRAV16A0A0A6YYK6 EDA-204ENST00000374553 5272 ntAPPRIS ALT1 TSL 1 (best) BASIC14.37□□□□□ -0.11
TRAV16A0A0A6YYK6 NTRK1-206ENST00000524377 2432 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
TRAV16A0A0A6YYK6 FAM53B-201ENST00000280780 1568 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
TRAV16A0A0A6YYK6 CDO1-201ENST00000250535 1860 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 21.8 ms