Protein–RNA interactions for Protein: Q9NRJ7

PCDHB16, Protocadherin beta-16, humanhuman

Predictions only

Length 776 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB16Q9NRJ7 HLA-DPB1-211ENST00000418931 1560 ntAPPRIS P2 BASIC17.96■□□□□ 0.47
PCDHB16Q9NRJ7 PRKAR1B-212ENST00000544935 2494 ntAPPRIS P1 TSL 5 BASIC17.96■□□□□ 0.47
PCDHB16Q9NRJ7 RASSF1-203ENST00000359365 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC17.96■□□□□ 0.47
PCDHB16Q9NRJ7 PHF12-202ENST00000332830 4759 ntAPPRIS P1 TSL 2 BASIC17.96■□□□□ 0.47
PCDHB16Q9NRJ7 HGH1-201ENST00000347708 2531 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
PCDHB16Q9NRJ7 WWTR1-AS1-202ENST00000479752 1700 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
PCDHB16Q9NRJ7 LYPD2-201ENST00000359228 594 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
PCDHB16Q9NRJ7 MRPL41-201ENST00000371443 1262 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
PCDHB16Q9NRJ7 ZNF32-202ENST00000395797 1201 ntAPPRIS P1 TSL 2 BASIC17.96■□□□□ 0.47
PCDHB16Q9NRJ7 NRIP3-203ENST00000531090 980 ntTSL 2 BASIC17.96■□□□□ 0.47
PCDHB16Q9NRJ7 AICDA-202ENST00000537228 667 ntTSL 5 BASIC17.96■□□□□ 0.47
PCDHB16Q9NRJ7 TYROBP-203ENST00000544690 522 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
PCDHB16Q9NRJ7 AC233992.3-201ENST00000607491 485 ntBASIC17.96■□□□□ 0.47
PCDHB16Q9NRJ7 ALX3-201ENST00000369792 1859 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
PCDHB16Q9NRJ7 PHACTR2-203ENST00000367584 2490 ntAPPRIS ALT2 TSL 5 BASIC17.96■□□□□ 0.47
PCDHB16Q9NRJ7 EGLN2-202ENST00000406058 2150 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.46
PCDHB16Q9NRJ7 PPFIA1-202ENST00000389547 4133 ntAPPRIS ALT1 TSL 1 (best) BASIC17.96■□□□□ 0.46
PCDHB16Q9NRJ7 PFKFB3-219ENST00000640683 2311 ntTSL 5 BASIC17.95■□□□□ 0.46
PCDHB16Q9NRJ7 CKMT1B-207ENST00000441322 1747 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
PCDHB16Q9NRJ7 ZNF554-201ENST00000317243 2736 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
PCDHB16Q9NRJ7 ZNF517-207ENST00000531720 1615 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
PCDHB16Q9NRJ7 TMEM206-205ENST00000535273 2119 ntTSL 2 BASIC17.95■□□□□ 0.46
PCDHB16Q9NRJ7 CDCA4-201ENST00000336219 2513 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
PCDHB16Q9NRJ7 DISC1-204ENST00000366633 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
PCDHB16Q9NRJ7 DISC1-214ENST00000539444 2658 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
PCDHB16Q9NRJ7 PYCARD-202ENST00000350605 696 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
PCDHB16Q9NRJ7 NAE1-203ENST00000379463 1909 ntTSL 2 BASIC17.95■□□□□ 0.46
PCDHB16Q9NRJ7 ZC3H12D-201ENST00000409806 5791 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
PCDHB16Q9NRJ7 AC079328.2-202ENST00000560903 1410 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
PCDHB16Q9NRJ7 DLG3-202ENST00000374355 5074 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
PCDHB16Q9NRJ7 CD55-205ENST00000367067 1843 ntAPPRIS ALT2 TSL 5 BASIC17.95■□□□□ 0.46
PCDHB16Q9NRJ7 MAP1LC3A-201ENST00000360668 1574 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
PCDHB16Q9NRJ7 CLN5-201ENST00000377453 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
PCDHB16Q9NRJ7 TRPC1-203ENST00000476941 3061 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
PCDHB16Q9NRJ7 AC138932.1-201ENST00000534164 6830 ntBASIC17.95■□□□□ 0.46
PCDHB16Q9NRJ7 PGAM5-204ENST00000543955 1773 ntTSL 2 BASIC17.94■□□□□ 0.46
PCDHB16Q9NRJ7 ECEL1-201ENST00000304546 2865 ntAPPRIS P3 TSL 1 (best) BASIC17.94■□□□□ 0.46
PCDHB16Q9NRJ7 ILF3-217ENST00000589998 2622 ntTSL 2 BASIC17.94■□□□□ 0.46
PCDHB16Q9NRJ7 YIPF2-201ENST00000253031 2087 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
PCDHB16Q9NRJ7 DGKZ-214ENST00000527911 3337 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
PCDHB16Q9NRJ7 TERF1-202ENST00000276603 1677 ntAPPRIS P4 TSL 1 (best) BASIC17.94■□□□□ 0.46
PCDHB16Q9NRJ7 LRRC3B-201ENST00000396641 1696 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
PCDHB16Q9NRJ7 DNAJB5-201ENST00000312316 2391 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
PCDHB16Q9NRJ7 DCTD-202ENST00000438320 1972 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
PCDHB16Q9NRJ7 C19orf60-201ENST00000358607 839 ntAPPRIS P3 TSL 1 (best) BASIC17.94■□□□□ 0.46
PCDHB16Q9NRJ7 C20orf144-201ENST00000375222 571 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
PCDHB16Q9NRJ7 C16orf86-201ENST00000403458 1267 ntAPPRIS P2 TSL 1 (best) BASIC17.94■□□□□ 0.46
PCDHB16Q9NRJ7 C19orf60-202ENST00000450195 702 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
PCDHB16Q9NRJ7 MGAT5B-207ENST00000565675 872 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
PCDHB16Q9NRJ7 LINC02136-201ENST00000567469 530 ntTSL 4 BASIC17.94■□□□□ 0.46
PCDHB16Q9NRJ7 AC126544.1-201ENST00000580842 1059 ntBASIC17.94■□□□□ 0.46
PCDHB16Q9NRJ7 SMUG1P1-201ENST00000590640 811 ntBASIC17.94■□□□□ 0.46
PCDHB16Q9NRJ7 IKBKG-206ENST00000594239 2299 ntAPPRIS P3 TSL 1 (best) BASIC17.94■□□□□ 0.46
PCDHB16Q9NRJ7 LYPD1-202ENST00000397463 1891 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
PCDHB16Q9NRJ7 TCP11-202ENST00000311875 2166 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
PCDHB16Q9NRJ7 GCH1-202ENST00000395514 1977 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
PCDHB16Q9NRJ7 ENTPD6-203ENST00000376652 2750 ntAPPRIS P3 TSL 1 (best) BASIC17.93■□□□□ 0.46
PCDHB16Q9NRJ7 NDUFAF3-202ENST00000326925 2012 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
PCDHB16Q9NRJ7 RREB1-201ENST00000334984 5789 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
PCDHB16Q9NRJ7 TMEM125-201ENST00000432792 1850 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
PCDHB16Q9NRJ7 ARHGAP23-222ENST00000622683 5964 ntAPPRIS P2 TSL 5 BASIC17.93■□□□□ 0.46
PCDHB16Q9NRJ7 CYHR1-201ENST00000306145 1409 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
PCDHB16Q9NRJ7 KRTAP5-1-201ENST00000382171 942 ntAPPRIS P1 BASIC17.93■□□□□ 0.46
PCDHB16Q9NRJ7 IGHV3-20-201ENST00000390606 415 ntAPPRIS P1 BASIC17.93■□□□□ 0.46
PCDHB16Q9NRJ7 FXN-202ENST00000396364 980 ntTSL 5 BASIC17.93■□□□□ 0.46
PCDHB16Q9NRJ7 CDKN3-207ENST00000543789 610 ntTSL 5 BASIC17.93■□□□□ 0.46
PCDHB16Q9NRJ7 AC093762.1-201ENST00000641981 837 ntAPPRIS P1 BASIC17.93■□□□□ 0.46
PCDHB16Q9NRJ7 ALG9-215ENST00000616540 2069 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
PCDHB16Q9NRJ7 LINC01521-201ENST00000504184 1943 ntBASIC17.93■□□□□ 0.46
PCDHB16Q9NRJ7 T-202ENST00000366871 2250 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
PCDHB16Q9NRJ7 GAL3ST3-201ENST00000312006 2133 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
PCDHB16Q9NRJ7 LTBP3-217ENST00000530785 2461 ntTSL 2 BASIC17.93■□□□□ 0.46
PCDHB16Q9NRJ7 BID-215ENST00000622694 2199 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
PCDHB16Q9NRJ7 FOSL1-201ENST00000312562 1669 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
PCDHB16Q9NRJ7 ARSA-205ENST00000453344 1650 ntTSL 2 BASIC17.93■□□□□ 0.46
PCDHB16Q9NRJ7 PCED1A-202ENST00000360652 2016 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
PCDHB16Q9NRJ7 PDXDC1-205ENST00000535621 2048 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
PCDHB16Q9NRJ7 OIP5-AS1-202ENST00000501665 1384 ntTSL 2 BASIC17.92■□□□□ 0.46
PCDHB16Q9NRJ7 SMPD1-201ENST00000342245 2452 ntAPPRIS ALT1 TSL 1 (best) BASIC17.92■□□□□ 0.46
PCDHB16Q9NRJ7 OLFM1-205ENST00000371796 2492 ntTSL 2 BASIC17.92■□□□□ 0.46
PCDHB16Q9NRJ7 FAM3A-208ENST00000419205 1763 ntTSL 2 BASIC17.92■□□□□ 0.46
PCDHB16Q9NRJ7 CENPU-201ENST00000281453 1998 ntAPPRIS P2 TSL 1 (best) BASIC17.92■□□□□ 0.46
PCDHB16Q9NRJ7 DCBLD2-201ENST00000326840 6122 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
PCDHB16Q9NRJ7 SLC25A39-201ENST00000225308 1607 ntAPPRIS P3 TSL 1 (best) BASIC17.92■□□□□ 0.46
PCDHB16Q9NRJ7 PKD2-201ENST00000237596 5056 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
PCDHB16Q9NRJ7 PCSK1N-201ENST00000218230 1050 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
PCDHB16Q9NRJ7 DCTPP1-201ENST00000319285 1222 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
PCDHB16Q9NRJ7 TESC-201ENST00000335209 1041 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
PCDHB16Q9NRJ7 CALM1-202ENST00000447653 1104 ntAPPRIS ALT1 TSL 2 BASIC17.92■□□□□ 0.46
PCDHB16Q9NRJ7 GNB1L-202ENST00000403325 1699 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
PCDHB16Q9NRJ7 ZSWIM5-201ENST00000359600 5819 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
PCDHB16Q9NRJ7 FBXL22-201ENST00000360587 1526 ntAPPRIS P2 TSL 1 (best) BASIC17.92■□□□□ 0.46
PCDHB16Q9NRJ7 PSKH1-202ENST00000570631 1509 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
PCDHB16Q9NRJ7 TPCN2-208ENST00000637342 2856 ntTSL 5 BASIC17.92■□□□□ 0.46
PCDHB16Q9NRJ7 NNT-AS1-206ENST00000606697 1945 ntTSL 2 BASIC17.92■□□□□ 0.46
PCDHB16Q9NRJ7 FAM206A-201ENST00000322940 2134 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
PCDHB16Q9NRJ7 ARRDC2-201ENST00000222250 2503 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
PCDHB16Q9NRJ7 SLC2A11-202ENST00000316185 1555 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
PCDHB16Q9NRJ7 ACOT2-201ENST00000238651 1774 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
PCDHB16Q9NRJ7 C12orf76-203ENST00000546651 1755 ntTSL 2 BASIC17.91■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 39.5 ms