Protein–RNA interactions for Protein: Q96S21

RAB40C, Ras-related protein Rab-40C, humanhuman

Predictions only

Length 281 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40CQ96S21 AC025164.2-201ENST00000501008 1898 ntTSL 5 BASIC16.82■□□□□ 0.28
RAB40CQ96S21 POLD2-201ENST00000223361 1597 ntTSL 5 BASIC16.82■□□□□ 0.28
RAB40CQ96S21 NSMF-201ENST00000265663 2981 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
RAB40CQ96S21 NSMF-206ENST00000371475 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC16.82■□□□□ 0.28
RAB40CQ96S21 IRX3-201ENST00000329734 2601 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
RAB40CQ96S21 ADAMTS13-203ENST00000371910 1074 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
RAB40CQ96S21 GUSBP5-201ENST00000418136 578 ntBASIC16.82■□□□□ 0.28
RAB40CQ96S21 CUL4A-209ENST00000488558 1111 ntTSL 3 BASIC16.82■□□□□ 0.28
RAB40CQ96S21 AC096887.1-203ENST00000607203 768 ntAPPRIS ALT2 TSL 5 BASIC16.82■□□□□ 0.28
RAB40CQ96S21 TTBK1-202ENST00000304139 2449 ntTSL 5 BASIC16.82■□□□□ 0.28
RAB40CQ96S21 SLC12A4-202ENST00000422611 4670 ntTSL 2 BASIC16.82■□□□□ 0.28
RAB40CQ96S21 PTPRE-201ENST00000254667 5331 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
RAB40CQ96S21 OSCAR-208ENST00000611261 2061 ntAPPRIS P4 TSL 5 BASIC16.82■□□□□ 0.28
RAB40CQ96S21 AC008105.1-201ENST00000587534 2003 ntTSL 2 BASIC16.82■□□□□ 0.28
RAB40CQ96S21 RUVBL2-206ENST00000595090 2009 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
RAB40CQ96S21 PCDHAC2-203ENST00000615316 3011 ntBASIC16.82■□□□□ 0.28
RAB40CQ96S21 RNF38-205ENST00000377877 1974 ntTSL 2 BASIC16.82■□□□□ 0.28
RAB40CQ96S21 SLC39A5-209ENST00000454355 1968 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
RAB40CQ96S21 CBLN2-201ENST00000269503 2945 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
RAB40CQ96S21 RNF165-205ENST00000588679 2904 ntBASIC16.82■□□□□ 0.28
RAB40CQ96S21 HLA-DPB1-211ENST00000418931 1560 ntAPPRIS P2 BASIC16.81■□□□□ 0.28
RAB40CQ96S21 PYCR3-207ENST00000495276 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
RAB40CQ96S21 EEF1D-203ENST00000419152 1452 ntAPPRIS ALT2 TSL 5 BASIC16.81■□□□□ 0.28
RAB40CQ96S21 MTMR14-206ENST00000420925 1427 ntAPPRIS ALT2 TSL 2 BASIC16.81■□□□□ 0.28
RAB40CQ96S21 SSH3-202ENST00000308298 2046 ntTSL 2 BASIC16.81■□□□□ 0.28
RAB40CQ96S21 ISCA1-203ENST00000375991 1958 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
RAB40CQ96S21 TDRP-203ENST00000523656 2622 ntTSL 5 BASIC16.81■□□□□ 0.28
RAB40CQ96S21 UBE2E2-203ENST00000425792 1248 ntAPPRIS P1 TSL 2 BASIC16.81■□□□□ 0.28
RAB40CQ96S21 AC055876.1-201ENST00000430589 895 ntTSL 2 BASIC16.81■□□□□ 0.28
RAB40CQ96S21 C14orf80-211ENST00000450383 1107 ntAPPRIS ALT2 TSL 5 BASIC16.81■□□□□ 0.28
RAB40CQ96S21 ZNF302-211ENST00000509528 577 ntTSL 4 BASIC16.81■□□□□ 0.28
RAB40CQ96S21 MIR3181-201ENST00000578512 73 ntBASIC16.81■□□□□ 0.28
RAB40CQ96S21 FASTK-201ENST00000297532 1827 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
RAB40CQ96S21 ACBD4-201ENST00000321854 1806 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
RAB40CQ96S21 LYSMD2-201ENST00000267838 1759 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
RAB40CQ96S21 NKX2-1-202ENST00000498187 2338 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
RAB40CQ96S21 FAM213A-202ENST00000372185 1723 ntTSL 2 BASIC16.81■□□□□ 0.28
RAB40CQ96S21 LRRC3B-201ENST00000396641 1696 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
RAB40CQ96S21 SUSD1-203ENST00000374264 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
RAB40CQ96S21 TIMM50-201ENST00000314349 1612 ntAPPRIS P2 TSL 1 (best) BASIC16.81■□□□□ 0.28
RAB40CQ96S21 RAB3A-201ENST00000222256 1528 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
RAB40CQ96S21 JMJD4-202ENST00000438896 2502 ntTSL 2 BASIC16.8■□□□□ 0.28
RAB40CQ96S21 MAP7D2-203ENST00000443379 2476 ntAPPRIS ALT2 TSL 2 BASIC16.8■□□□□ 0.28
RAB40CQ96S21 NKX1-2-201ENST00000451024 3364 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
RAB40CQ96S21 ZGPAT-203ENST00000357119 1896 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
RAB40CQ96S21 ARNTL2-209ENST00000546179 1861 ntAPPRIS ALT2 TSL 2 BASIC16.8■□□□□ 0.28
RAB40CQ96S21 GPT-205ENST00000528431 1822 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
RAB40CQ96S21 NGEF-202ENST00000373552 2286 ntAPPRIS P1 TSL 2 BASIC16.8■□□□□ 0.28
RAB40CQ96S21 MCTP1-218ENST00000515393 5396 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
RAB40CQ96S21 CXCL16-201ENST00000293778 2222 ntAPPRIS P2 TSL 1 (best) BASIC16.8■□□□□ 0.28
RAB40CQ96S21 DALRD3-202ENST00000341949 1739 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
RAB40CQ96S21 GGA2-211ENST00000567468 1713 ntTSL 2 BASIC16.8■□□□□ 0.28
RAB40CQ96S21 ZFP69B-202ENST00000411995 2109 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
RAB40CQ96S21 KRT16P3-201ENST00000439127 1283 ntBASIC16.8■□□□□ 0.28
RAB40CQ96S21 SERGEF-219ENST00000532265 1124 ntTSL 2 BASIC16.8■□□□□ 0.28
RAB40CQ96S21 C12orf43-208ENST00000539736 1033 ntAPPRIS ALT2 TSL 2 BASIC16.8■□□□□ 0.28
RAB40CQ96S21 AP001267.3-203ENST00000554407 579 ntTSL 2 BASIC16.8■□□□□ 0.28
RAB40CQ96S21 AC099791.2-201ENST00000605725 427 ntBASIC16.8■□□□□ 0.28
RAB40CQ96S21 MIR6724-1-201ENST00000616420 92 ntBASIC16.8■□□□□ 0.28
RAB40CQ96S21 MIR6724-2-201ENST00000616483 92 ntBASIC16.8■□□□□ 0.28
RAB40CQ96S21 MIR6724-4-201ENST00000617390 92 ntBASIC16.8■□□□□ 0.28
RAB40CQ96S21 MIR6724-3-201ENST00000622482 92 ntBASIC16.8■□□□□ 0.28
RAB40CQ96S21 MAMSTR-203ENST00000594582 1693 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
RAB40CQ96S21 DUSP28-201ENST00000343217 1555 ntAPPRIS P1 TSL 2 BASIC16.8■□□□□ 0.28
RAB40CQ96S21 SERPINF2-201ENST00000324015 2284 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
RAB40CQ96S21 TMEM189-201ENST00000371650 2222 ntAPPRIS ALT1 TSL 1 (best) BASIC16.8■□□□□ 0.28
RAB40CQ96S21 GNB2-209ENST00000436220 1479 ntTSL 5 BASIC16.8■□□□□ 0.28
RAB40CQ96S21 TMCC2-209ENST00000637895 1455 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
RAB40CQ96S21 BCL7A-201ENST00000261822 2581 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
RAB40CQ96S21 IVD-206ENST00000487418 1809 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
RAB40CQ96S21 INPP5J-203ENST00000401755 1751 ntTSL 2 BASIC16.79■□□□□ 0.28
RAB40CQ96S21 PAN3-201ENST00000380958 2833 ntAPPRIS P2 TSL 5 BASIC16.79■□□□□ 0.28
RAB40CQ96S21 ZNF692-202ENST00000366471 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
RAB40CQ96S21 TCP11-203ENST00000373974 1689 ntAPPRIS ALT2 TSL 2 BASIC16.79■□□□□ 0.28
RAB40CQ96S21 SMUG1-215ENST00000508394 1697 ntAPPRIS P1 TSL 2 BASIC16.79■□□□□ 0.28
RAB40CQ96S21 DET1-207ENST00000564406 2315 ntTSL 2 BASIC16.79■□□□□ 0.28
RAB40CQ96S21 ANAPC13-201ENST00000354910 1209 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
RAB40CQ96S21 PEMT-202ENST00000395781 1050 ntTSL 2 BASIC16.79■□□□□ 0.28
RAB40CQ96S21 TMEM151B-201ENST00000438774 1140 ntAPPRIS ALT2 TSL 3 BASIC16.79■□□□□ 0.28
RAB40CQ96S21 MEIS1-AS3-201ENST00000454167 707 ntTSL 4 BASIC16.79■□□□□ 0.28
RAB40CQ96S21 GPX4-213ENST00000622390 1002 ntTSL 5 BASIC16.79■□□□□ 0.28
RAB40CQ96S21 SLC35A3-216ENST00000639221 1032 ntTSL 5 BASIC16.79■□□□□ 0.28
RAB40CQ96S21 SPOPL-201ENST00000280098 6025 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
RAB40CQ96S21 DENND1A-203ENST00000373624 5010 ntAPPRIS P4 TSL 5 BASIC16.79■□□□□ 0.28
RAB40CQ96S21 ADM-206ENST00000528655 1889 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
RAB40CQ96S21 TNFSF11-203ENST00000398795 2199 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
RAB40CQ96S21 IRS2-201ENST00000375856 8138 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
RAB40CQ96S21 AL162377.1-201ENST00000618844 1793 ntBASIC16.79■□□□□ 0.28
RAB40CQ96S21 HMGA2-205ENST00000425208 1444 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
RAB40CQ96S21 AF117829.1-201ENST00000519655 1398 ntTSL 5 BASIC16.78■□□□□ 0.28
RAB40CQ96S21 SMPD5-201ENST00000528912 1390 ntTSL 5 BASIC16.78■□□□□ 0.28
RAB40CQ96S21 CLDN23-201ENST00000519106 2169 ntAPPRIS P1 BASIC16.78■□□□□ 0.28
RAB40CQ96S21 CNTNAP3B-212ENST00000617422 2170 ntTSL 2 BASIC16.78■□□□□ 0.28
RAB40CQ96S21 CRLF3-201ENST00000324238 2957 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
RAB40CQ96S21 ZGPAT-204ENST00000369967 1890 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
RAB40CQ96S21 CXXC5-201ENST00000302517 2658 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
RAB40CQ96S21 BID-204ENST00000399767 2129 ntTSL 2 BASIC16.78■□□□□ 0.28
RAB40CQ96S21 HNRNPAB-208ENST00000515193 1595 ntAPPRIS ALT2 TSL 5 BASIC16.78■□□□□ 0.28
RAB40CQ96S21 SLC16A5-202ENST00000450736 2051 ntAPPRIS P2 TSL 1 (best) BASIC16.78■□□□□ 0.28
RAB40CQ96S21 RNF38-202ENST00000350199 5104 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 38.7 ms