Protein–RNA interactions for Protein: P54278

PMS2, Mismatch repair endonuclease PMS2, humanhuman

Predictions only

Length 862 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PMS2P54278 EOMES-202ENST00000449599 2829 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
PMS2P54278 VAMP2-204ENST00000488857 874 ntAPPRIS ALT1 TSL 3 BASIC21.42■■□□□ 1.02
PMS2P54278 AL136967.2-201ENST00000623968 743 ntBASIC21.42■■□□□ 1.02
PMS2P54278 PFKFB3-219ENST00000640683 2311 ntTSL 5 BASIC21.42■■□□□ 1.02
PMS2P54278 FGFR1-241ENST00000619564 5482 ntTSL 5 BASIC21.42■■□□□ 1.02
PMS2P54278 SOX2-201ENST00000325404 2513 ntAPPRIS P1 BASIC21.42■■□□□ 1.02
PMS2P54278 ASB16-201ENST00000293414 2139 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
PMS2P54278 ST7L-221ENST00000490067 1780 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
PMS2P54278 AF117829.1-201ENST00000519655 1398 ntTSL 5 BASIC21.41■■□□□ 1.02
PMS2P54278 E4F1-201ENST00000301727 2573 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
PMS2P54278 STOML2-201ENST00000356493 1278 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
PMS2P54278 ZDHHC16-205ENST00000370846 1280 ntTSL 3 BASIC21.41■■□□□ 1.02
PMS2P54278 LBX2-202ENST00000377566 1186 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
PMS2P54278 ACYP2-202ENST00000394666 993 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
PMS2P54278 MIR939-201ENST00000401314 82 ntBASIC21.41■■□□□ 1.02
PMS2P54278 AC092171.4-201ENST00000609130 632 ntBASIC21.41■■□□□ 1.02
PMS2P54278 NARS2-201ENST00000281038 2519 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
PMS2P54278 CYP21A2-222ENST00000435122 1914 ntTSL 2 BASIC21.41■■□□□ 1.02
PMS2P54278 GPAA1-202ENST00000361036 1840 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
PMS2P54278 NKX1-2-201ENST00000451024 3364 ntAPPRIS P1 TSL 5 BASIC21.4■■□□□ 1.02
PMS2P54278 FAM102B-202ENST00000405454 1585 ntAPPRIS ALT2 TSL 5 BASIC21.4■■□□□ 1.02
PMS2P54278 AP006587.3-201ENST00000525742 1516 ntBASIC21.4■■□□□ 1.02
PMS2P54278 SCUBE1-201ENST00000290460 2258 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
PMS2P54278 RNF38-204ENST00000357058 5254 ntAPPRIS P1 TSL 5 BASIC21.4■■□□□ 1.02
PMS2P54278 SIRT3-204ENST00000525319 1475 ntAPPRIS ALT2 TSL 2 BASIC21.4■■□□□ 1.02
PMS2P54278 FAM53A-202ENST00000461064 2159 ntAPPRIS P1 TSL 2 BASIC21.4■■□□□ 1.02
PMS2P54278 MAPT-203ENST00000340799 5724 ntAPPRIS ALT2 TSL 1 (best) BASIC21.4■■□□□ 1.02
PMS2P54278 UPF1-207ENST00000599848 5311 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
PMS2P54278 PRADC1-201ENST00000258083 1083 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
PMS2P54278 UBE2E2-203ENST00000425792 1248 ntAPPRIS P1 TSL 2 BASIC21.4■■□□□ 1.02
PMS2P54278 AP001330.3-201ENST00000520123 633 ntBASIC21.4■■□□□ 1.02
PMS2P54278 SERGEF-219ENST00000532265 1124 ntTSL 2 BASIC21.4■■□□□ 1.02
PMS2P54278 BAG1-212ENST00000641048 1038 ntAPPRIS P3 BASIC21.4■■□□□ 1.02
PMS2P54278 PTGER2-201ENST00000245457 2383 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
PMS2P54278 AC121338.2-201ENST00000622535 1744 ntBASIC21.4■■□□□ 1.02
PMS2P54278 TDRP-203ENST00000523656 2622 ntTSL 5 BASIC21.4■■□□□ 1.02
PMS2P54278 MRFAP1-201ENST00000320912 2049 ntAPPRIS P1 TSL 2 BASIC21.39■■□□□ 1.02
PMS2P54278 SLC26A5-209ENST00000393735 1947 ntTSL 1 (best) BASIC21.39■■□□□ 1.02
PMS2P54278 AC020907.5-201ENST00000624372 1936 ntBASIC21.39■■□□□ 1.02
PMS2P54278 CACNA1B-201ENST00000277549 7158 ntAPPRIS ALT2 TSL 1 (best) BASIC21.39■■□□□ 1.02
PMS2P54278 CACNA1B-202ENST00000277551 7158 ntAPPRIS ALT2 TSL 5 BASIC21.39■■□□□ 1.02
PMS2P54278 SUMF2-201ENST00000275607 1894 ntTSL 1 (best) BASIC21.39■■□□□ 1.02
PMS2P54278 NYX-202ENST00000378220 2297 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.02
PMS2P54278 SYF2-201ENST00000236273 1345 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
PMS2P54278 CCDC47-202ENST00000403162 2195 ntAPPRIS P1 TSL 2 BASIC21.39■■□□□ 1.01
PMS2P54278 CNTNAP3B-212ENST00000617422 2170 ntTSL 2 BASIC21.39■■□□□ 1.01
PMS2P54278 DDX55-205ENST00000538744 1735 ntTSL 5 BASIC21.39■■□□□ 1.01
PMS2P54278 HSPE1-203ENST00000409729 478 ntTSL 2 BASIC21.39■■□□□ 1.01
PMS2P54278 ARHGDIA-217ENST00000584461 886 ntTSL 2 BASIC21.39■■□□□ 1.01
PMS2P54278 B3GALT4-204ENST00000451237 1694 ntAPPRIS P1 BASIC21.39■■□□□ 1.01
PMS2P54278 DTX3-201ENST00000337737 2029 ntAPPRIS P3 TSL 2 BASIC21.39■■□□□ 1.01
PMS2P54278 HAND2-AS1-237ENST00000616485 2420 ntTSL 2 BASIC21.39■■□□□ 1.01
PMS2P54278 KCNH2-201ENST00000262186 4286 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
PMS2P54278 TBX1-203ENST00000359500 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC21.39■■□□□ 1.01
PMS2P54278 ENGASE-205ENST00000579016 2579 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
PMS2P54278 BRD4-202ENST00000360016 3240 ntAPPRIS ALT2 TSL 1 (best) BASIC21.38■■□□□ 1.01
PMS2P54278 NRP2-206ENST00000417189 2386 ntTSL 2 BASIC21.38■■□□□ 1.01
PMS2P54278 PYCR3-207ENST00000495276 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC21.38■■□□□ 1.01
PMS2P54278 DR1-201ENST00000370267 1647 ntAPPRIS P1 TSL 2 BASIC21.38■■□□□ 1.01
PMS2P54278 LAMTOR1-201ENST00000278671 1179 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
PMS2P54278 AL122058.1-201ENST00000412321 1166 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
PMS2P54278 AC091305.1-201ENST00000479476 895 ntBASIC21.38■■□□□ 1.01
PMS2P54278 GSX2-205ENST00000611459 1262 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
PMS2P54278 STX5-203ENST00000394690 1568 ntTSL 5 BASIC21.38■■□□□ 1.01
PMS2P54278 HLA-DPB1-211ENST00000418931 1560 ntAPPRIS P2 BASIC21.38■■□□□ 1.01
PMS2P54278 SYT6-210ENST00000641643 1587 ntBASIC21.38■■□□□ 1.01
PMS2P54278 MAP3K14-AS1-203ENST00000585780 2475 ntTSL 2 BASIC21.38■■□□□ 1.01
PMS2P54278 IL17RE-206ENST00000454190 2757 ntTSL 2 BASIC21.38■■□□□ 1.01
PMS2P54278 AC007225.1-201ENST00000566331 1836 ntBASIC21.38■■□□□ 1.01
PMS2P54278 RARG-204ENST00000543726 1779 ntTSL 2 BASIC21.38■■□□□ 1.01
PMS2P54278 RNF165-205ENST00000588679 2904 ntBASIC21.38■■□□□ 1.01
PMS2P54278 UBE2F-201ENST00000272930 2009 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
PMS2P54278 PKM-215ENST00000565154 2004 ntAPPRIS ALT1 TSL 2 BASIC21.38■■□□□ 1.01
PMS2P54278 HMGA2-205ENST00000425208 1444 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
PMS2P54278 PAN3-201ENST00000380958 2833 ntAPPRIS P2 TSL 5 BASIC21.37■■□□□ 1.01
PMS2P54278 MTURN-201ENST00000324453 5937 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
PMS2P54278 NSMF-201ENST00000265663 2981 ntAPPRIS P3 TSL 1 (best) BASIC21.37■■□□□ 1.01
PMS2P54278 NSMF-206ENST00000371475 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC21.37■■□□□ 1.01
PMS2P54278 NFIB-207ENST00000397579 3129 ntTSL 5 BASIC21.37■■□□□ 1.01
PMS2P54278 LGI3-202ENST00000424267 3114 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
PMS2P54278 CAMTA1-208ENST00000473578 567 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
PMS2P54278 SLC35A3-216ENST00000639221 1032 ntTSL 5 BASIC21.37■■□□□ 1.01
PMS2P54278 RAB3A-201ENST00000222256 1528 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
PMS2P54278 PGAM5-204ENST00000543955 1773 ntTSL 2 BASIC21.37■■□□□ 1.01
PMS2P54278 PQLC2-201ENST00000375153 2153 ntAPPRIS P1 TSL 2 BASIC21.37■■□□□ 1.01
PMS2P54278 COLEC12-201ENST00000400256 5742 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
PMS2P54278 MON1A-201ENST00000296473 2370 ntAPPRIS P3 TSL 1 (best) BASIC21.37■■□□□ 1.01
PMS2P54278 YTHDF3-213ENST00000621820 2363 ntTSL 2 BASIC21.37■■□□□ 1.01
PMS2P54278 CBLN2-201ENST00000269503 2945 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
PMS2P54278 DTX2-212ENST00000446820 1770 ntAPPRIS ALT2 TSL 1 (best) BASIC21.36■■□□□ 1.01
PMS2P54278 HPS6-201ENST00000299238 2649 ntAPPRIS P1 BASIC21.36■■□□□ 1.01
PMS2P54278 DISC1-202ENST00000317586 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC21.36■■□□□ 1.01
PMS2P54278 GRB14-201ENST00000263915 2382 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
PMS2P54278 SUMO3-204ENST00000411651 1921 ntTSL 2 BASIC21.36■■□□□ 1.01
PMS2P54278 CNNM1-201ENST00000356713 5959 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
PMS2P54278 B4GAT1-201ENST00000311181 2072 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
PMS2P54278 MYCBPAP-202ENST00000419930 1640 ntAPPRIS ALT2 TSL 1 (best) BASIC21.36■■□□□ 1.01
PMS2P54278 CCNE1-201ENST00000262643 2043 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
PMS2P54278 PACSIN3-211ENST00000539589 2009 ntAPPRIS P1 TSL 2 BASIC21.36■■□□□ 1.01
PMS2P54278 BCL7A-201ENST00000261822 2581 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Retrieved 100 of 98,524 protein–RNA pairs in 20.3 ms