Protein–RNA interactions for Protein: P49450

CENPA, Histone H3-like centromeric protein A, humanhuman

Predictions only

Length 140 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CENPAP49450 ARFGAP3-201ENST00000263245 2857 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
CENPAP49450 YBX3-202ENST00000279550 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
CENPAP49450 SDSL-201ENST00000345635 1397 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
CENPAP49450 TMC5-203ENST00000396229 4917 ntAPPRIS ALT2 TSL 5 BASIC18.76■□□□□ 0.59
CENPAP49450 TMEM129-206ENST00000536901 2172 ntAPPRIS P1 TSL 5 BASIC18.76■□□□□ 0.59
CENPAP49450 STRADB-201ENST00000194530 2293 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
CENPAP49450 NDUFAF1-201ENST00000260361 1461 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
CENPAP49450 MAG-202ENST00000392213 2390 ntAPPRIS P4 TSL 1 (best) BASIC18.76■□□□□ 0.59
CENPAP49450 PGAM5-204ENST00000543955 1773 ntTSL 2 BASIC18.76■□□□□ 0.59
CENPAP49450 C11orf96-201ENST00000339446 1308 ntTSL 5 BASIC18.75■□□□□ 0.59
CENPAP49450 AP005233.1-201ENST00000562341 2424 ntTSL 2 BASIC18.75■□□□□ 0.59
CENPAP49450 UBALD1-201ENST00000283474 1413 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
CENPAP49450 SERBP1-202ENST00000370990 1621 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
CENPAP49450 CD55-205ENST00000367067 1843 ntAPPRIS ALT2 TSL 5 BASIC18.75■□□□□ 0.59
CENPAP49450 LONP1-203ENST00000585374 2882 ntTSL 5 BASIC18.75■□□□□ 0.59
CENPAP49450 PCSK1N-201ENST00000218230 1050 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
CENPAP49450 NSMF-201ENST00000265663 2981 ntAPPRIS P3 TSL 1 (best) BASIC18.75■□□□□ 0.59
CENPAP49450 NSMF-206ENST00000371475 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC18.75■□□□□ 0.59
CENPAP49450 HES6-202ENST00000409002 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
CENPAP49450 AP003419.1-201ENST00000535922 470 ntTSL 3 BASIC18.75■□□□□ 0.59
CENPAP49450 AC009097.2-201ENST00000562763 465 ntTSL 2 BASIC18.75■□□□□ 0.59
CENPAP49450 DIRAS1-202ENST00000585334 774 ntAPPRIS P1 BASIC18.75■□□□□ 0.59
CENPAP49450 SGTA-201ENST00000221566 2330 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
CENPAP49450 MAP1LC3A-201ENST00000360668 1574 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
CENPAP49450 LRRC3B-201ENST00000396641 1696 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
CENPAP49450 CXCL16-203ENST00000574412 1668 ntAPPRIS P2 TSL 1 (best) BASIC18.75■□□□□ 0.59
CENPAP49450 CLN3-207ENST00000395653 1430 ntTSL 5 BASIC18.74■□□□□ 0.59
CENPAP49450 WWTR1-AS1-202ENST00000479752 1700 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
CENPAP49450 NAE1-203ENST00000379463 1909 ntTSL 2 BASIC18.74■□□□□ 0.59
CENPAP49450 COMT-202ENST00000361682 2437 ntAPPRIS P3 TSL 1 (best) BASIC18.74■□□□□ 0.59
CENPAP49450 DCK-201ENST00000286648 2716 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
CENPAP49450 TMEM125-201ENST00000432792 1850 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
CENPAP49450 GNB1L-202ENST00000403325 1699 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
CENPAP49450 OIP5-AS1-202ENST00000501665 1384 ntTSL 2 BASIC18.74■□□□□ 0.59
CENPAP49450 PRKCZ-AS1-201ENST00000333854 1253 ntTSL 2 BASIC18.74■□□□□ 0.59
CENPAP49450 HBM-201ENST00000356815 506 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
CENPAP49450 C11orf91-201ENST00000379011 811 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
CENPAP49450 CALM1-202ENST00000447653 1104 ntAPPRIS ALT1 TSL 2 BASIC18.74■□□□□ 0.59
CENPAP49450 P2RX4-202ENST00000337233 2032 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
CENPAP49450 ZNF707-201ENST00000358656 2183 ntAPPRIS P1 TSL 2 BASIC18.74■□□□□ 0.59
CENPAP49450 SMAD4-201ENST00000342988 8769 ntAPPRIS P1 TSL 5 BASIC18.73■□□□□ 0.59
CENPAP49450 QSOX2-201ENST00000358701 4530 ntAPPRIS P1 TSL 2 BASIC18.73■□□□□ 0.59
CENPAP49450 LYPD1-202ENST00000397463 1891 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
CENPAP49450 AL035252.2-201ENST00000454676 3168 ntTSL 2 BASIC18.73■□□□□ 0.59
CENPAP49450 TMEM206-205ENST00000535273 2119 ntTSL 2 BASIC18.73■□□□□ 0.59
CENPAP49450 PALM-207ENST00000590161 2137 ntTSL 4 BASIC18.73■□□□□ 0.59
CENPAP49450 OLIG3-201ENST00000367734 2049 ntAPPRIS P1 BASIC18.73■□□□□ 0.59
CENPAP49450 RASA4CP-201ENST00000424092 1398 ntBASIC18.73■□□□□ 0.59
CENPAP49450 NEDD4L-237ENST00000617539 728 ntTSL 2 BASIC18.73■□□□□ 0.59
CENPAP49450 CELF2-213ENST00000633077 1733 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
CENPAP49450 PROSER2-205ENST00000622831 1646 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
CENPAP49450 C12orf76-203ENST00000546651 1755 ntTSL 2 BASIC18.73■□□□□ 0.59
CENPAP49450 TMEM250-205ENST00000561457 2804 ntAPPRIS P1 TSL 2 BASIC18.73■□□□□ 0.59
CENPAP49450 DHRS2-202ENST00000344777 1678 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
CENPAP49450 IFNGR2-203ENST00000405436 1684 ntTSL 5 BASIC18.73■□□□□ 0.59
CENPAP49450 PDXDC1-205ENST00000535621 2048 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
CENPAP49450 EFS-202ENST00000351354 2704 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
CENPAP49450 SORCS3-202ENST00000369701 5757 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
CENPAP49450 TMEM161A-202ENST00000450333 1930 ntTSL 2 BASIC18.72■□□□□ 0.59
CENPAP49450 LARGE2-208ENST00000531526 2528 ntAPPRIS P3 TSL 2 BASIC18.72■□□□□ 0.59
CENPAP49450 ARNT-202ENST00000358595 4887 ntAPPRIS P3 TSL 1 (best) BASIC18.72■□□□□ 0.59
CENPAP49450 BCL2-202ENST00000398117 7461 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
CENPAP49450 CERKL-205ENST00000409440 2425 ntTSL 2 BASIC18.72■□□□□ 0.59
CENPAP49450 KLHDC1-201ENST00000359332 2691 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
CENPAP49450 KCTD20-210ENST00000536244 5345 ntTSL 2 BASIC18.72■□□□□ 0.59
CENPAP49450 SNAP23-202ENST00000349777 2480 ntTSL 2 BASIC18.72■□□□□ 0.59
CENPAP49450 FGF8-204ENST00000347978 823 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
CENPAP49450 NINJ1-201ENST00000375446 1281 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
CENPAP49450 FXN-202ENST00000396364 980 ntTSL 5 BASIC18.72■□□□□ 0.59
CENPAP49450 MFF-208ENST00000409616 1247 ntTSL 5 BASIC18.72■□□□□ 0.59
CENPAP49450 AP006621.1-201ENST00000532946 536 ntTSL 5 BASIC18.72■□□□□ 0.59
CENPAP49450 AC010203.1-202ENST00000550096 695 ntTSL 3 BASIC18.72■□□□□ 0.59
CENPAP49450 AL355102.2-201ENST00000553811 600 ntAPPRIS P1 TSL 2 BASIC18.72■□□□□ 0.59
CENPAP49450 ZFAND2B-202ENST00000409097 1765 ntTSL 2 BASIC18.72■□□□□ 0.59
CENPAP49450 NGLY1-204ENST00000396649 2024 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
CENPAP49450 ARSA-205ENST00000453344 1650 ntTSL 2 BASIC18.72■□□□□ 0.59
CENPAP49450 RAP2C-202ENST00000370874 2333 ntAPPRIS P1 TSL 2 BASIC18.72■□□□□ 0.59
CENPAP49450 LINC00094-201ENST00000432807 2300 ntAPPRIS ALT2 TSL 2 BASIC18.72■□□□□ 0.59
CENPAP49450 PRR20B-201ENST00000377930 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
CENPAP49450 PRR20A-201ENST00000377931 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
CENPAP49450 FAHD1-202ENST00000382668 1845 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
CENPAP49450 PRR20E-201ENST00000434815 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
CENPAP49450 PRR20D-201ENST00000452123 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
CENPAP49450 PRR20C-201ENST00000544357 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
CENPAP49450 PRR20C-202ENST00000614894 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
CENPAP49450 SYT8-201ENST00000341958 1556 ntAPPRIS ALT2 TSL 5 BASIC18.72■□□□□ 0.59
CENPAP49450 GSR-204ENST00000537535 1323 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
CENPAP49450 ZNF470-201ENST00000330619 7151 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
CENPAP49450 POMZP3-202ENST00000310842 1490 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
CENPAP49450 PCED1A-202ENST00000360652 2016 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
CENPAP49450 CACNA1B-204ENST00000371357 9642 ntAPPRIS ALT2 TSL 5 BASIC18.71■□□□□ 0.59
CENPAP49450 RCN2-202ENST00000394883 1366 ntTSL 5 BASIC18.71■□□□□ 0.59
CENPAP49450 NARF-205ENST00000412079 1760 ntTSL 5 BASIC18.71■□□□□ 0.59
CENPAP49450 BID-215ENST00000622694 2199 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
CENPAP49450 COL18A1-202ENST00000355480 5924 ntAPPRIS P3 TSL 1 (best) BASIC18.71■□□□□ 0.59
CENPAP49450 EBPL-204ENST00000378272 766 ntTSL 3 BASIC18.71■□□□□ 0.59
CENPAP49450 STX5-203ENST00000394690 1568 ntTSL 5 BASIC18.71■□□□□ 0.59
CENPAP49450 JDP2-201ENST00000267569 1700 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
CENPAP49450 CLN8-213ENST00000637156 1897 ntAPPRIS P1 TSL 5 BASIC18.71■□□□□ 0.59
CENPAP49450 RAB1A-202ENST00000409751 1333 ntTSL 5 BASIC18.71■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 32.1 ms