Protein–RNA interactions for Protein: P09603

CSF1, Macrophage colony-stimulating factor 1, humanhuman

Predictions only

Length 554 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSF1P09603 EVC-201ENST00000264956 6431 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
CSF1P09603 HOXB7-201ENST00000239165 1371 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
CSF1P09603 SDSL-201ENST00000345635 1397 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
CSF1P09603 PLCB2-204ENST00000557821 4517 ntAPPRIS ALT1 TSL 1 (best) BASIC17.91■□□□□ 0.46
CSF1P09603 LAYN-204ENST00000525126 1763 ntTSL 5 BASIC17.91■□□□□ 0.46
CSF1P09603 SH2B3-201ENST00000341259 5406 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
CSF1P09603 PPFIA1-201ENST00000253925 5234 ntAPPRIS P4 TSL 1 (best) BASIC17.91■□□□□ 0.46
CSF1P09603 MRFAP1-201ENST00000320912 2049 ntAPPRIS P1 TSL 2 BASIC17.91■□□□□ 0.46
CSF1P09603 TRABD2A-201ENST00000335459 1844 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
CSF1P09603 GFRA4-201ENST00000290417 1427 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
CSF1P09603 CRHR1-203ENST00000339069 2490 ntTSL 2 BASIC17.91■□□□□ 0.46
CSF1P09603 ME2-218ENST00000640965 2476 ntTSL 5 BASIC17.91■□□□□ 0.46
CSF1P09603 ZGPAT-206ENST00000448100 1881 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
CSF1P09603 FAM69B-202ENST00000371692 1668 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
CSF1P09603 HAGHL-212ENST00000564537 1667 ntTSL 2 BASIC17.91■□□□□ 0.46
CSF1P09603 UGP2-201ENST00000337130 2338 ntAPPRIS P2 TSL 1 (best) BASIC17.91■□□□□ 0.46
CSF1P09603 FAIM-203ENST00000393034 927 ntAPPRIS P3 TSL 2 BASIC17.91■□□□□ 0.46
CSF1P09603 CROT-202ENST00000412227 1213 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
CSF1P09603 EPDR1-202ENST00000423717 638 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
CSF1P09603 TMEM218-209ENST00000529583 848 ntAPPRIS P1 TSL 3 BASIC17.91■□□□□ 0.46
CSF1P09603 AP006621.1-201ENST00000532946 536 ntTSL 5 BASIC17.91■□□□□ 0.46
CSF1P09603 AL031432.3-201ENST00000607698 485 ntBASIC17.91■□□□□ 0.46
CSF1P09603 TPBGL-201ENST00000562197 2793 ntAPPRIS P1 BASIC17.91■□□□□ 0.46
CSF1P09603 AFG3L1P-217ENST00000557444 2447 ntBASIC17.91■□□□□ 0.46
CSF1P09603 GLRX3-201ENST00000331244 1302 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
CSF1P09603 MAP1LC3A-201ENST00000360668 1574 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
CSF1P09603 PAXIP1-AS1-201ENST00000608317 2256 ntBASIC17.91■□□□□ 0.46
CSF1P09603 VGF-203ENST00000611537 1622 ntTSL 5 BASIC17.9■□□□□ 0.46
CSF1P09603 GFER-201ENST00000248114 2345 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
CSF1P09603 NKX2-1-202ENST00000498187 2338 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
CSF1P09603 CDO1-201ENST00000250535 1860 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
CSF1P09603 DNAAF3-201ENST00000391720 2169 ntAPPRIS P3 TSL 2 BASIC17.9■□□□□ 0.46
CSF1P09603 KCNQ5-202ENST00000355194 6566 ntAPPRIS ALT1 TSL 5 BASIC17.9■□□□□ 0.46
CSF1P09603 KCNQ5-206ENST00000402622 6596 ntAPPRIS ALT2 TSL 5 BASIC17.9■□□□□ 0.46
CSF1P09603 PRR16-202ENST00000407149 1747 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
CSF1P09603 SENP5-204ENST00000445299 2491 ntTSL 2 BASIC17.9■□□□□ 0.46
CSF1P09603 HDAC11-211ENST00000433119 2043 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
CSF1P09603 DTX2-212ENST00000446820 1770 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
CSF1P09603 COPS7A-222ENST00000626119 1768 ntTSL 3 BASIC17.9■□□□□ 0.46
CSF1P09603 LINC01089-202ENST00000429892 1521 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
CSF1P09603 VKORC1L1-202ENST00000434382 1541 ntTSL 2 BASIC17.9■□□□□ 0.46
CSF1P09603 RNF166-202ENST00000537718 1525 ntTSL 2 BASIC17.9■□□□□ 0.46
CSF1P09603 GATM-206ENST00000558336 1522 ntTSL 2 BASIC17.9■□□□□ 0.46
CSF1P09603 NEDD4L-237ENST00000617539 728 ntTSL 2 BASIC17.9■□□□□ 0.46
CSF1P09603 GRAMD1B-217ENST00000640939 1212 ntTSL 5 BASIC17.9■□□□□ 0.46
CSF1P09603 DISC1-202ENST00000317586 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
CSF1P09603 TPM1-208ENST00000404484 1568 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
CSF1P09603 PRSS22-201ENST00000161006 1386 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
CSF1P09603 METTL21A-210ENST00000458426 1366 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
CSF1P09603 RCE1-202ENST00000524506 1379 ntTSL 5 BASIC17.9■□□□□ 0.46
CSF1P09603 AP003356.1-202ENST00000517910 2770 ntTSL 2 BASIC17.9■□□□□ 0.46
CSF1P09603 AL391422.3-201ENST00000603791 2761 ntBASIC17.9■□□□□ 0.46
CSF1P09603 FBXL19-207ENST00000565690 2570 ntAPPRIS ALT2 TSL 5 BASIC17.89■□□□□ 0.46
CSF1P09603 LRP5L-203ENST00000444995 1714 ntAPPRIS ALT2 TSL 5 BASIC17.89■□□□□ 0.46
CSF1P09603 NAT8L-201ENST00000331662 5571 ntTSL 1 (best) BASIC17.89■□□□□ 0.46
CSF1P09603 MEIS3-202ENST00000441740 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
CSF1P09603 JMJD4-202ENST00000438896 2502 ntTSL 2 BASIC17.89■□□□□ 0.45
CSF1P09603 FGF8-204ENST00000347978 823 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
CSF1P09603 AC026271.2-201ENST00000428091 497 ntBASIC17.89■□□□□ 0.45
CSF1P09603 AC105265.2-201ENST00000467189 838 ntBASIC17.89■□□□□ 0.45
CSF1P09603 FAM174B-207ENST00000555748 866 ntAPPRIS ALT2 TSL 3 BASIC17.89■□□□□ 0.45
CSF1P09603 TGFBR3L-202ENST00000565886 1260 ntAPPRIS P1 TSL 5 BASIC17.89■□□□□ 0.45
CSF1P09603 GRAMD4P4-201ENST00000613563 1115 ntBASIC17.89■□□□□ 0.45
CSF1P09603 ACBD4-216ENST00000619916 1276 ntTSL 5 BASIC17.89■□□□□ 0.45
CSF1P09603 CBLN2-201ENST00000269503 2945 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
CSF1P09603 FUT5-202ENST00000588525 1988 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
CSF1P09603 PITX2-201ENST00000306732 2320 ntAPPRIS P4 TSL 1 (best) BASIC17.89■□□□□ 0.45
CSF1P09603 HOXC13-201ENST00000243056 2423 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
CSF1P09603 FGF14-IT1-202ENST00000607251 2123 ntTSL 2 BASIC17.89■□□□□ 0.45
CSF1P09603 RNPEPL1-201ENST00000270357 5658 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
CSF1P09603 MTSS1L-201ENST00000338779 4992 ntAPPRIS P2 TSL 1 (best) BASIC17.89■□□□□ 0.45
CSF1P09603 ZNRF3-203ENST00000544604 6851 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
CSF1P09603 HOXD4-201ENST00000306324 1464 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
CSF1P09603 TMEM132A-202ENST00000453848 3346 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
CSF1P09603 ALDH6A1-201ENST00000350259 1869 ntAPPRIS ALT2 TSL 2 BASIC17.88■□□□□ 0.45
CSF1P09603 SPG7-202ENST00000341316 2288 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
CSF1P09603 MFSD7-209ENST00000515118 1556 ntTSL 5 BASIC17.88■□□□□ 0.45
CSF1P09603 AC016065.1-201ENST00000500118 2413 ntTSL 2 BASIC17.88■□□□□ 0.45
CSF1P09603 TERF1-202ENST00000276603 1677 ntAPPRIS P4 TSL 1 (best) BASIC17.88■□□□□ 0.45
CSF1P09603 FSTL3-201ENST00000166139 2542 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
CSF1P09603 UBE2B-201ENST00000265339 2515 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
CSF1P09603 CRLF3-201ENST00000324238 2957 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
CSF1P09603 NAA38-201ENST00000333775 999 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
CSF1P09603 ZDHHC16-205ENST00000370846 1280 ntTSL 3 BASIC17.88■□□□□ 0.45
CSF1P09603 GATA2-AS1-201ENST00000464242 1163 ntTSL 2 BASIC17.88■□□□□ 0.45
CSF1P09603 SMARCA5-AS1-201ENST00000500800 945 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
CSF1P09603 AC092171.4-201ENST00000609130 632 ntBASIC17.88■□□□□ 0.45
CSF1P09603 SCUBE1-208ENST00000615096 1119 ntTSL 2 BASIC17.88■□□□□ 0.45
CSF1P09603 TRIM58-201ENST00000366481 3225 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
CSF1P09603 SUMF2-201ENST00000275607 1894 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
CSF1P09603 PARP2-202ENST00000429687 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
CSF1P09603 PAN3-201ENST00000380958 2833 ntAPPRIS P2 TSL 5 BASIC17.88■□□□□ 0.45
CSF1P09603 MYH14-208ENST00000598205 6137 ntAPPRIS P3 TSL 5 BASIC17.88■□□□□ 0.45
CSF1P09603 SPAST-203ENST00000615843 5212 ntAPPRIS P4 TSL 1 (best) BASIC17.88■□□□□ 0.45
CSF1P09603 SUMO3-204ENST00000411651 1921 ntTSL 2 BASIC17.88■□□□□ 0.45
CSF1P09603 SIRT3-204ENST00000525319 1475 ntAPPRIS ALT2 TSL 2 BASIC17.88■□□□□ 0.45
CSF1P09603 AC008105.1-201ENST00000587534 2003 ntTSL 2 BASIC17.88■□□□□ 0.45
CSF1P09603 LENG1-201ENST00000222224 1542 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
CSF1P09603 HPS6-201ENST00000299238 2649 ntAPPRIS P1 BASIC17.87■□□□□ 0.45
CSF1P09603 MESP2-201ENST00000341735 1552 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 19.7 ms