Protein–RNA interactions for Protein: O95983

MBD3, Methyl-CpG-binding domain protein 3, humanhuman

Predictions only

Length 291 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MBD3O95983 SUSD1-204ENST00000374270 3124 ntAPPRIS P3 TSL 1 (best) BASIC23.82■■□□□ 1.4
MBD3O95983 TBL1Y-203ENST00000383032 2407 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
MBD3O95983 SET-201ENST00000322030 2915 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
MBD3O95983 MYCBPAP-202ENST00000419930 1640 ntAPPRIS ALT2 TSL 1 (best) BASIC23.82■■□□□ 1.4
MBD3O95983 ZNF510-203ENST00000375231 5616 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
MBD3O95983 FP700111.2-201ENST00000619190 1892 ntBASIC23.82■■□□□ 1.4
MBD3O95983 TST-201ENST00000249042 1211 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
MBD3O95983 DBNL-220ENST00000494774 2117 ntAPPRIS P4 TSL 1 (best) BASIC23.82■■□□□ 1.4
MBD3O95983 AP005435.1-201ENST00000529293 1178 ntBASIC23.82■■□□□ 1.4
MBD3O95983 AP001267.3-203ENST00000554407 579 ntTSL 2 BASIC23.82■■□□□ 1.4
MBD3O95983 CSPG5-201ENST00000264723 4080 ntAPPRIS P3 TSL 1 (best) BASIC23.82■■□□□ 1.4
MBD3O95983 OTUB1-210ENST00000541478 1803 ntTSL 5 BASIC23.82■■□□□ 1.4
MBD3O95983 RHBDL3-204ENST00000538145 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC23.82■■□□□ 1.4
MBD3O95983 SPNS2-201ENST00000329078 3447 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
MBD3O95983 UBE2B-201ENST00000265339 2515 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
MBD3O95983 TP53RK-201ENST00000372102 2012 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
MBD3O95983 CBWD6-201ENST00000377391 1792 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
MBD3O95983 CCT5-205ENST00000506600 1939 ntTSL 2 BASIC23.81■■□□□ 1.4
MBD3O95983 ST3GAL4-217ENST00000534083 1919 ntAPPRIS ALT1 TSL 5 BASIC23.81■■□□□ 1.4
MBD3O95983 MRPS34-202ENST00000397375 1024 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
MBD3O95983 SLC25A39-203ENST00000537904 1274 ntTSL 2 BASIC23.81■■□□□ 1.4
MBD3O95983 SLC16A10-206ENST00000612036 1231 ntTSL 5 BASIC23.81■■□□□ 1.4
MBD3O95983 ZNF331-214ENST00000511154 2120 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
MBD3O95983 NR5A1-202ENST00000373588 3104 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
MBD3O95983 LGI3-202ENST00000424267 3114 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
MBD3O95983 AZIN2-204ENST00000373443 2048 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
MBD3O95983 VPS13B-204ENST00000441350 1626 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
MBD3O95983 AL390879.2-201ENST00000424306 2222 ntTSL 2 BASIC23.8■■□□□ 1.4
MBD3O95983 ADRM1-205ENST00000620230 1361 ntTSL 5 BASIC23.8■■□□□ 1.4
MBD3O95983 TRMT2A-201ENST00000252136 2964 ntAPPRIS P3 TSL 1 (best) BASIC23.8■■□□□ 1.4
MBD3O95983 NDOR1-204ENST00000458322 1829 ntTSL 1 (best) BASIC23.8■■□□□ 1.4
MBD3O95983 HOXC13-201ENST00000243056 2423 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
MBD3O95983 XPA-201ENST00000375128 1417 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
MBD3O95983 RNF208-201ENST00000391553 1077 ntAPPRIS P1 BASIC23.8■■□□□ 1.4
MBD3O95983 CALM1-202ENST00000447653 1104 ntAPPRIS ALT1 TSL 2 BASIC23.8■■□□□ 1.4
MBD3O95983 SNAI3-AS1-201ENST00000563261 998 ntTSL 1 (best) BASIC23.8■■□□□ 1.4
MBD3O95983 AC092171.4-201ENST00000609130 632 ntBASIC23.8■■□□□ 1.4
MBD3O95983 EML2-220ENST00000589876 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC23.8■■□□□ 1.4
MBD3O95983 NXN-201ENST00000336868 3036 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
MBD3O95983 MRAS-202ENST00000423968 1803 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
MBD3O95983 NDUFB2-212ENST00000476279 1666 ntAPPRIS P1 TSL 5 BASIC23.79■■□□□ 1.4
MBD3O95983 CYB5R2-212ENST00000533558 1658 ntAPPRIS P1 TSL 2 BASIC23.79■■□□□ 1.4
MBD3O95983 NGLY1-204ENST00000396649 2024 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
MBD3O95983 LINC00304-201ENST00000321214 2243 ntTSL 2 BASIC23.79■■□□□ 1.4
MBD3O95983 GPAA1-201ENST00000355091 2078 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
MBD3O95983 KRTAP5-7-201ENST00000398536 1408 ntAPPRIS P1 BASIC23.79■■□□□ 1.4
MBD3O95983 STMN3-201ENST00000370053 2255 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
MBD3O95983 EVA1B-201ENST00000270824 1054 ntAPPRIS P1 TSL 2 BASIC23.79■■□□□ 1.4
MBD3O95983 MRPL23-202ENST00000381519 643 ntAPPRIS P1 TSL 3 BASIC23.79■■□□□ 1.4
MBD3O95983 MRPL23-205ENST00000397298 736 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
MBD3O95983 CUL4A-209ENST00000488558 1111 ntTSL 3 BASIC23.79■■□□□ 1.4
MBD3O95983 AC019163.1-201ENST00000512634 610 ntTSL 2 BASIC23.79■■□□□ 1.4
MBD3O95983 RAB6A-204ENST00000536566 1267 ntTSL 5 BASIC23.79■■□□□ 1.4
MBD3O95983 RUSC1-AS1-203ENST00000450199 1636 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
MBD3O95983 MAP3K15-201ENST00000338883 4012 ntAPPRIS P1 TSL 5 BASIC23.79■■□□□ 1.4
MBD3O95983 CBWD3-202ENST00000377342 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC23.79■■□□□ 1.4
MBD3O95983 TMEM11-201ENST00000317635 2095 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
MBD3O95983 TRIM58-201ENST00000366481 3225 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
MBD3O95983 AVPR2-202ENST00000358927 1763 ntAPPRIS P1 TSL 5 BASIC23.78■■□□□ 1.4
MBD3O95983 DPF1-203ENST00000414789 1960 ntTSL 2 BASIC23.78■■□□□ 1.4
MBD3O95983 CELF2-211ENST00000632065 1952 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
MBD3O95983 SMG8-203ENST00000578922 2178 ntBASIC23.78■■□□□ 1.4
MBD3O95983 LRFN4-201ENST00000309602 2431 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
MBD3O95983 AC007009.1-201ENST00000458624 429 ntTSL 2 BASIC23.78■■□□□ 1.4
MBD3O95983 UNC93B8-201ENST00000511903 705 ntBASIC23.78■■□□□ 1.4
MBD3O95983 CCDC194-202ENST00000636079 705 ntAPPRIS P1 TSL 5 BASIC23.78■■□□□ 1.4
MBD3O95983 MOK-226ENST00000522874 1890 ntAPPRIS ALT2 TSL 5 BASIC23.78■■□□□ 1.4
MBD3O95983 TMEM235-202ENST00000421688 2490 ntAPPRIS P1 TSL 5 BASIC23.78■■□□□ 1.4
MBD3O95983 PTPA-204ENST00000355007 2515 ntTSL 5 BASIC23.78■■□□□ 1.4
MBD3O95983 RAC1-201ENST00000348035 2323 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
MBD3O95983 GPR62-201ENST00000322241 2191 ntAPPRIS P1 BASIC23.78■■□□□ 1.4
MBD3O95983 PLBD1-201ENST00000240617 2426 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
MBD3O95983 MTMR12-203ENST00000382142 5187 ntAPPRIS P3 TSL 1 (best) BASIC23.78■■□□□ 1.4
MBD3O95983 WISP2-203ENST00000372868 1600 ntAPPRIS P1 TSL 3 BASIC23.77■■□□□ 1.4
MBD3O95983 RARRES2-202ENST00000466675 1618 ntAPPRIS P1 TSL 2 BASIC23.77■■□□□ 1.4
MBD3O95983 PTPN11-202ENST00000392597 1876 ntTSL 1 (best) BASIC23.77■■□□□ 1.4
MBD3O95983 TRIM14-202ENST00000342043 1479 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
MBD3O95983 SH3GL1-206ENST00000598564 2194 ntTSL 2 BASIC23.77■■□□□ 1.4
MBD3O95983 FAM173A-201ENST00000219535 806 ntAPPRIS ALT2 TSL 2 BASIC23.77■■□□□ 1.4
MBD3O95983 CTAG1B-201ENST00000328435 748 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
MBD3O95983 AL117209.1-201ENST00000560931 828 ntTSL 3 BASIC23.77■■□□□ 1.4
MBD3O95983 CTAG1A-202ENST00000599837 748 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
MBD3O95983 COCH-205ENST00000475087 1997 ntTSL 1 (best) BASIC23.77■■□□□ 1.4
MBD3O95983 OXER1-201ENST00000378661 1781 ntAPPRIS P1 BASIC23.77■■□□□ 1.4
MBD3O95983 CALY-201ENST00000252939 2271 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
MBD3O95983 FGFR1-214ENST00000447712 5900 ntAPPRIS P3 TSL 1 (best) BASIC23.77■■□□□ 1.4
MBD3O95983 NFYC-204ENST00000372653 1862 ntTSL 2 BASIC23.77■■□□□ 1.4
MBD3O95983 AGTR1-209ENST00000497524 2359 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
MBD3O95983 AC008073.3-201ENST00000610442 2281 ntAPPRIS P1 TSL 2 BASIC23.76■■□□□ 1.39
MBD3O95983 GPR157-201ENST00000377411 5265 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
MBD3O95983 CRMP1-201ENST00000324989 3146 ntTSL 1 (best) BASIC23.76■■□□□ 1.39
MBD3O95983 KLF16-201ENST00000250916 2890 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
MBD3O95983 GALNS-201ENST00000268695 2363 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
MBD3O95983 RNH1-222ENST00000533410 1829 ntAPPRIS P1 TSL 5 BASIC23.76■■□□□ 1.39
MBD3O95983 CIRBP-225ENST00000589710 1835 ntTSL 2 BASIC23.76■■□□□ 1.39
MBD3O95983 WDR86-AS1-204ENST00000489632 751 ntTSL 3 BASIC23.76■■□□□ 1.39
MBD3O95983 PABPN1-207ENST00000556821 1220 ntTSL 2 BASIC23.76■■□□□ 1.39
MBD3O95983 ARHGDIA-217ENST00000584461 886 ntTSL 2 BASIC23.76■■□□□ 1.39
MBD3O95983 LMLN-204ENST00000420910 2423 ntAPPRIS P2 TSL 1 (best) BASIC23.76■■□□□ 1.39
MBD3O95983 PROSER2-205ENST00000622831 1646 ntAPPRIS ALT2 TSL 1 (best) BASIC23.76■■□□□ 1.39
Retrieved 100 of 98,524 protein–RNA pairs in 18.3 ms