Protein–RNA interactions for Protein: O43567

RNF13, E3 ubiquitin-protein ligase RNF13, humanhuman

Predictions only

Length 381 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF13O43567 MGAT4B-201ENST00000292591 2446 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
RNF13O43567 FIP1L1-201ENST00000306932 1878 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
RNF13O43567 MOSPD3-202ENST00000379527 1016 ntAPPRIS P1 TSL 5 BASIC18.89■□□□□ 0.61
RNF13O43567 RORB-AS1-201ENST00000417576 1178 ntTSL 5 BASIC18.89■□□□□ 0.61
RNF13O43567 RMND5A-201ENST00000283632 6301 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
RNF13O43567 ECHDC2-221ENST00000536120 1446 ntTSL 3 BASIC18.89■□□□□ 0.61
RNF13O43567 C7orf26-201ENST00000344417 2182 ntAPPRIS P1 TSL 2 BASIC18.89■□□□□ 0.61
RNF13O43567 AP006284.1-201ENST00000527620 2210 ntTSL 2 BASIC18.89■□□□□ 0.61
RNF13O43567 STX5-203ENST00000394690 1568 ntTSL 5 BASIC18.89■□□□□ 0.61
RNF13O43567 FGFR1-238ENST00000532791 5590 ntAPPRIS ALT1 TSL 5 BASIC18.89■□□□□ 0.61
RNF13O43567 BCAM-201ENST00000270233 2402 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
RNF13O43567 DLGAP4-204ENST00000373913 5056 ntAPPRIS P4 TSL 1 (best) BASIC18.89■□□□□ 0.61
RNF13O43567 GRINA-202ENST00000395068 1814 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
RNF13O43567 PDXDC1-205ENST00000535621 2048 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
RNF13O43567 NFIX-202ENST00000360105 5459 ntTSL 5 BASIC18.88■□□□□ 0.61
RNF13O43567 HGH1-201ENST00000347708 2531 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
RNF13O43567 CLPSL2-201ENST00000360454 488 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
RNF13O43567 TPRG1LP1-201ENST00000598702 760 ntBASIC18.88■□□□□ 0.61
RNF13O43567 ALKAL2-204ENST00000403610 1389 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
RNF13O43567 SLC17A7-201ENST00000221485 2973 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
RNF13O43567 MAP1LC3A-201ENST00000360668 1574 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
RNF13O43567 TM7SF2-201ENST00000279263 1722 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
RNF13O43567 RARG-204ENST00000543726 1779 ntTSL 2 BASIC18.88■□□□□ 0.61
RNF13O43567 LMO4-202ENST00000370544 5405 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
RNF13O43567 RNF38-205ENST00000377877 1974 ntTSL 2 BASIC18.88■□□□□ 0.61
RNF13O43567 EYA2-202ENST00000327619 2702 ntAPPRIS P1 TSL 2 BASIC18.87■□□□□ 0.61
RNF13O43567 FLT1-204ENST00000541932 2969 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
RNF13O43567 EPHX3-201ENST00000221730 1822 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
RNF13O43567 RPL8-201ENST00000262584 1041 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
RNF13O43567 PPCS-202ENST00000372560 793 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
RNF13O43567 LRRC3C-201ENST00000377924 891 ntAPPRIS P1 TSL 3 BASIC18.87■□□□□ 0.61
RNF13O43567 CROT-202ENST00000412227 1213 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
RNF13O43567 VGLL4-208ENST00000424529 1025 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
RNF13O43567 VKORC1L1-202ENST00000434382 1541 ntTSL 2 BASIC18.87■□□□□ 0.61
RNF13O43567 EIPR1-206ENST00000443925 1771 ntTSL 3 BASIC18.87■□□□□ 0.61
RNF13O43567 SLC35A3-205ENST00000465289 5696 ntAPPRIS P1 TSL 5 BASIC18.87■□□□□ 0.61
RNF13O43567 COCH-205ENST00000475087 1997 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
RNF13O43567 CDKN2A-210ENST00000530628 748 ntAPPRIS P1 TSL 5 BASIC18.87■□□□□ 0.61
RNF13O43567 NPAS3-210ENST00000551492 2817 ntAPPRIS ALT2 TSL 5 BASIC18.87■□□□□ 0.61
RNF13O43567 PPP1R14A-205ENST00000591585 949 ntTSL 2 BASIC18.87■□□□□ 0.61
RNF13O43567 NEU4-202ENST00000391969 2526 ntAPPRIS P1 TSL 2 BASIC18.87■□□□□ 0.61
RNF13O43567 FEM1AP1-201ENST00000431297 1995 ntBASIC18.86■□□□□ 0.61
RNF13O43567 ALX3-201ENST00000369792 1859 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
RNF13O43567 SUSD1-202ENST00000374263 2973 ntAPPRIS ALT2 TSL 2 BASIC18.86■□□□□ 0.61
RNF13O43567 PELI3-202ENST00000349459 2783 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
RNF13O43567 CDIPT-210ENST00000570016 1346 ntAPPRIS P1 TSL 5 BASIC18.86■□□□□ 0.61
RNF13O43567 ADAMTS13-204ENST00000371911 1155 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
RNF13O43567 TSPY4-201ENST00000383008 1143 ntAPPRIS ALT2 TSL 5 BASIC18.86■□□□□ 0.61
RNF13O43567 NUDT14-202ENST00000392568 845 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
RNF13O43567 JARID2-AS1-201ENST00000441978 455 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
RNF13O43567 CHTF8-210ENST00000523421 766 ntTSL 3 BASIC18.86■□□□□ 0.61
RNF13O43567 PRSS22-203ENST00000571228 1037 ntTSL 2 BASIC18.86■□□□□ 0.61
RNF13O43567 SCN1B-203ENST00000595652 814 ntTSL 2 BASIC18.86■□□□□ 0.61
RNF13O43567 ANKLE1-204ENST00000594072 2294 ntTSL 5 BASIC18.86■□□□□ 0.61
RNF13O43567 PKMYT1-201ENST00000262300 2171 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
RNF13O43567 PALM-207ENST00000590161 2137 ntTSL 4 BASIC18.86■□□□□ 0.61
RNF13O43567 SMIM11B-205ENST00000624304 1863 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
RNF13O43567 MRAS-202ENST00000423968 1803 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
RNF13O43567 ADGRL1-202ENST00000361434 5610 ntAPPRIS P3 TSL 1 (best) BASIC18.85■□□□□ 0.61
RNF13O43567 MFF-207ENST00000409565 1548 ntTSL 2 BASIC18.85■□□□□ 0.61
RNF13O43567 ARHGAP11A-205ENST00000563864 2279 ntTSL 5 BASIC18.85■□□□□ 0.61
RNF13O43567 ZNF282-204ENST00000610704 3722 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
RNF13O43567 SEPT5-210ENST00000455784 2070 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
RNF13O43567 ILKAP-211ENST00000612675 1335 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
RNF13O43567 NNT-AS1-206ENST00000606697 1945 ntTSL 2 BASIC18.85■□□□□ 0.61
RNF13O43567 NMRAL1-202ENST00000404295 1233 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
RNF13O43567 RNF146-206ENST00000480444 843 ntTSL 2 BASIC18.85■□□□□ 0.61
RNF13O43567 GLI4-210ENST00000523522 1297 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
RNF13O43567 AES-207ENST00000586839 942 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
RNF13O43567 GPC1-202ENST00000420138 1835 ntTSL 5 BASIC18.85■□□□□ 0.61
RNF13O43567 AL049796.1-201ENST00000565336 1766 ntBASIC18.85■□□□□ 0.61
RNF13O43567 ADGRA3-204ENST00000502482 2870 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
RNF13O43567 FLT1-209ENST00000639477 6337 ntTSL 5 BASIC18.85■□□□□ 0.61
RNF13O43567 NOC4L-201ENST00000330579 1632 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
RNF13O43567 VPS13B-204ENST00000441350 1626 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
RNF13O43567 ARL6IP4-220ENST00000543566 1591 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
RNF13O43567 ZNF513-202ENST00000407879 2077 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
RNF13O43567 VPS29-206ENST00000549578 1523 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
RNF13O43567 FAM3C-201ENST00000359943 2508 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
RNF13O43567 NAE1-203ENST00000379463 1909 ntTSL 2 BASIC18.84■□□□□ 0.61
RNF13O43567 AC138649.1-201ENST00000619611 1449 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
RNF13O43567 RBM26-207ENST00000622611 5230 ntTSL 2 BASIC18.84■□□□□ 0.61
RNF13O43567 SDHAP3-201ENST00000436493 736 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
RNF13O43567 FEZ1-205ENST00000524435 750 ntTSL 2 BASIC18.84■□□□□ 0.61
RNF13O43567 TMEM179B-205ENST00000533861 797 ntTSL 5 BASIC18.84■□□□□ 0.61
RNF13O43567 NTRK3-206ENST00000540489 2145 ntTSL 5 BASIC18.84■□□□□ 0.61
RNF13O43567 TUNAR-203ENST00000554321 767 ntAPPRIS P1 TSL 4 BASIC18.84■□□□□ 0.61
RNF13O43567 ELANE-202ENST00000590230 1028 ntAPPRIS P1 TSL 5 BASIC18.84■□□□□ 0.61
RNF13O43567 CPT2-209ENST00000636935 803 ntTSL 5 BASIC18.84■□□□□ 0.61
RNF13O43567 CDV3-201ENST00000264993 3307 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
RNF13O43567 MATN4-204ENST00000372756 2077 ntAPPRIS P2 TSL 1 (best) BASIC18.84■□□□□ 0.61
RNF13O43567 DACT2-203ENST00000607983 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
RNF13O43567 ZNF773-204ENST00000598770 2019 ntAPPRIS ALT2 TSL 2 BASIC18.84■□□□□ 0.61
RNF13O43567 RPUSD1-202ENST00000561734 2159 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
RNF13O43567 DDIT4-201ENST00000307365 1748 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
RNF13O43567 CSNK1G3-206ENST00000511130 1356 ntTSL 2 BASIC18.83■□□□□ 0.61
RNF13O43567 PPP1R3F-201ENST00000055335 3421 ntAPPRIS P1 TSL 2 BASIC18.83■□□□□ 0.61
RNF13O43567 PEX6-201ENST00000244546 2696 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
RNF13O43567 EPO-201ENST00000252723 1330 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
RNF13O43567 TXNRD3-204ENST00000640433 1932 ntAPPRIS P4 TSL 1 (best) BASIC18.83■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 15.5 ms