Protein–RNA interactions for Protein: O00526

UPK2, Uroplakin-2, humanhuman

Predictions only

Length 184 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK2O00526 NUDT11-201ENST00000375992 2385 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
UPK2O00526 ZNF773-204ENST00000598770 2019 ntAPPRIS ALT2 TSL 2 BASIC16.68■□□□□ 0.26
UPK2O00526 ARID1B-220ENST00000636930 8246 ntAPPRIS ALT2 TSL 2 BASIC16.68■□□□□ 0.26
UPK2O00526 LINC00969-219ENST00000453324 1439 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
UPK2O00526 STARD3-202ENST00000394250 1949 ntTSL 2 BASIC16.68■□□□□ 0.26
UPK2O00526 SDHAF3-202ENST00000432641 2060 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
UPK2O00526 PTOV1-212ENST00000599732 1577 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
UPK2O00526 AP004607.4-201ENST00000530158 1459 ntBASIC16.67■□□□□ 0.26
UPK2O00526 ARHGAP5-203ENST00000396582 5786 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
UPK2O00526 SLC25A22-216ENST00000531214 1790 ntAPPRIS P1 TSL 2 BASIC16.67■□□□□ 0.26
UPK2O00526 SPPL2B-212ENST00000618220 2459 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
UPK2O00526 NUDT14-202ENST00000392568 845 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
UPK2O00526 GLI4-210ENST00000523522 1297 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
UPK2O00526 TRAF4-217ENST00000618771 543 ntTSL 5 BASIC16.67■□□□□ 0.26
UPK2O00526 ESRRA-202ENST00000405666 2283 ntAPPRIS P3 TSL 1 (best) BASIC16.67■□□□□ 0.26
UPK2O00526 DUSP15-201ENST00000278979 1732 ntTSL 2 BASIC16.67■□□□□ 0.26
UPK2O00526 NPNT-204ENST00000453617 2419 ntAPPRIS ALT1 TSL 2 BASIC16.67■□□□□ 0.26
UPK2O00526 CCDC107-205ENST00000421582 1324 ntAPPRIS ALT2 TSL 2 BASIC16.67■□□□□ 0.26
UPK2O00526 AC135048.1-201ENST00000566056 1318 ntTSL 2 BASIC16.67■□□□□ 0.26
UPK2O00526 ACHE-203ENST00000411582 2179 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
UPK2O00526 SOBP-201ENST00000317357 5245 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
UPK2O00526 CHRNB2-205ENST00000637900 2390 ntAPPRIS ALT1 TSL 5 BASIC16.66■□□□□ 0.26
UPK2O00526 IL17RC-205ENST00000413608 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
UPK2O00526 INTS11-208ENST00000435064 2148 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
UPK2O00526 ANKLE1-204ENST00000594072 2294 ntTSL 5 BASIC16.66■□□□□ 0.26
UPK2O00526 MAPT-210ENST00000535772 5718 ntTSL 5 BASIC16.66■□□□□ 0.26
UPK2O00526 C11orf91-201ENST00000379011 811 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
UPK2O00526 NT5C3AP1-201ENST00000394500 1012 ntBASIC16.66■□□□□ 0.26
UPK2O00526 KRT3-201ENST00000417996 2319 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
UPK2O00526 TDRP-202ENST00000427263 2465 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
UPK2O00526 PRKCQ-AS1-202ENST00000445427 1133 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
UPK2O00526 SMIM3-201ENST00000526627 2332 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
UPK2O00526 MRM1-203ENST00000612760 1284 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
UPK2O00526 FADS6-203ENST00000612771 2154 ntAPPRIS P2 TSL 1 (best) BASIC16.66■□□□□ 0.26
UPK2O00526 DLGAP4-204ENST00000373913 5056 ntAPPRIS P4 TSL 1 (best) BASIC16.66■□□□□ 0.26
UPK2O00526 COL13A1-202ENST00000357811 2991 ntAPPRIS ALT2 TSL 5 BASIC16.66■□□□□ 0.26
UPK2O00526 SPOCK3-217ENST00000511269 1768 ntAPPRIS P3 TSL 2 BASIC16.66■□□□□ 0.26
UPK2O00526 DACT2-203ENST00000607983 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
UPK2O00526 AP005212.1-201ENST00000581547 1997 ntBASIC16.66■□□□□ 0.26
UPK2O00526 RNH1-222ENST00000533410 1829 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
UPK2O00526 KLHDC4-204ENST00000353170 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
UPK2O00526 DNAAF3-202ENST00000455045 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
UPK2O00526 LINC01011-201ENST00000445000 2811 ntTSL 2 BASIC16.65■□□□□ 0.26
UPK2O00526 RHNO1-204ENST00000489288 1870 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
UPK2O00526 CDIPT-202ENST00000561555 1726 ntTSL 2 BASIC16.65■□□□□ 0.26
UPK2O00526 AC061975.6-201ENST00000579045 1553 ntBASIC16.65■□□□□ 0.26
UPK2O00526 NEK3-208ENST00000618534 2414 ntAPPRIS P2 TSL 5 BASIC16.65■□□□□ 0.26
UPK2O00526 MEIS3-212ENST00000561293 1918 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
UPK2O00526 CTU2-210ENST00000567949 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
UPK2O00526 AP004608.1-201ENST00000531319 1402 ntTSL 2 BASIC16.65■□□□□ 0.26
UPK2O00526 AC138649.1-201ENST00000619611 1449 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
UPK2O00526 LYSMD2-201ENST00000267838 1759 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
UPK2O00526 SMCO4-201ENST00000298966 1104 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
UPK2O00526 LRRC3C-201ENST00000377924 891 ntAPPRIS P1 TSL 3 BASIC16.65■□□□□ 0.26
UPK2O00526 NKX2-2-AS1-201ENST00000549659 638 ntTSL 5 BASIC16.65■□□□□ 0.26
UPK2O00526 AC005775.1-201ENST00000592413 850 ntTSL 5 BASIC16.65■□□□□ 0.26
UPK2O00526 AL139246.5-201ENST00000606645 996 ntBASIC16.65■□□□□ 0.26
UPK2O00526 POLR2E-214ENST00000619917 932 ntTSL 5 BASIC16.65■□□□□ 0.26
UPK2O00526 AL358852.1-201ENST00000623174 1268 ntBASIC16.65■□□□□ 0.26
UPK2O00526 MANEAL-202ENST00000373045 2685 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
UPK2O00526 EPHA8-202ENST00000374644 1802 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
UPK2O00526 AC007225.1-201ENST00000566331 1836 ntBASIC16.65■□□□□ 0.26
UPK2O00526 CNTNAP3B-212ENST00000617422 2170 ntTSL 2 BASIC16.65■□□□□ 0.26
UPK2O00526 FAM129C-203ENST00000449408 2004 ntAPPRIS ALT2 TSL 2 BASIC16.65■□□□□ 0.26
UPK2O00526 CD7-207ENST00000584284 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
UPK2O00526 ILKAP-211ENST00000612675 1335 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
UPK2O00526 LAMC3-202ENST00000361069 6133 ntAPPRIS P1 TSL 2 BASIC16.65■□□□□ 0.26
UPK2O00526 AC090360.1-201ENST00000569722 2218 ntAPPRIS ALT2 TSL 2 BASIC16.65■□□□□ 0.26
UPK2O00526 TMEM163-201ENST00000281924 1892 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
UPK2O00526 TTYH1-202ENST00000376530 1885 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
UPK2O00526 NUP160-203ENST00000526870 1537 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
UPK2O00526 EXOC3L2-202ENST00000413988 2964 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
UPK2O00526 TMED4-203ENST00000457408 2322 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
UPK2O00526 CELF2-211ENST00000632065 1952 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
UPK2O00526 RAB11FIP4-211ENST00000621161 8628 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
UPK2O00526 H2AFX-202ENST00000530167 1614 ntAPPRIS P1 BASIC16.64■□□□□ 0.25
UPK2O00526 KLF14-201ENST00000583337 2827 ntAPPRIS P1 BASIC16.64■□□□□ 0.25
UPK2O00526 MTURN-203ENST00000409688 843 ntTSL 2 BASIC16.64■□□□□ 0.25
UPK2O00526 PRKCQ-AS1-204ENST00000455810 920 ntTSL 2 BASIC16.64■□□□□ 0.25
UPK2O00526 ARHGAP24-206ENST00000503995 1273 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
UPK2O00526 FAM66A-201ENST00000525829 921 ntTSL 2 BASIC16.64■□□□□ 0.25
UPK2O00526 CALM1-203ENST00000544280 1064 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
UPK2O00526 RALB-208ENST00000631312 311 ntTSL 5 BASIC16.64■□□□□ 0.25
UPK2O00526 ZFP69B-202ENST00000411995 2109 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
UPK2O00526 MYO1D-213ENST00000583621 1916 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
UPK2O00526 ARPC5L-201ENST00000259477 1325 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
UPK2O00526 CA7-201ENST00000338437 1555 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
UPK2O00526 TMED4-201ENST00000289577 2203 ntTSL 2 BASIC16.64■□□□□ 0.25
UPK2O00526 AC073314.1-201ENST00000568729 2216 ntBASIC16.64■□□□□ 0.25
UPK2O00526 AL158151.1-201ENST00000372490 2047 ntTSL 2 BASIC16.63■□□□□ 0.25
UPK2O00526 PACSIN3-201ENST00000298838 1843 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
UPK2O00526 TUBGCP3-204ENST00000464139 2461 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
UPK2O00526 WDR4-202ENST00000398208 2122 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
UPK2O00526 SP3-208ENST00000640958 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
UPK2O00526 AC092667.1-201ENST00000434301 2586 ntBASIC16.63■□□□□ 0.25
UPK2O00526 DALRD3-202ENST00000341949 1739 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
UPK2O00526 UBR2-203ENST00000372903 2423 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
UPK2O00526 PPCS-202ENST00000372560 793 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
UPK2O00526 MOSPD3-202ENST00000379527 1016 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
UPK2O00526 NGEF-203ENST00000409079 1022 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 32.3 ms