Protein–RNA interactions for Protein: A6NCI5

LINC00862, Putative transmembrane protein encoded by LINC00862, humanhuman

Predictions only

Length 91 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00862A6NCI5 SPC24-206ENST00000592540 2315 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
LINC00862A6NCI5 AP005717.1-201ENST00000500705 1899 ntTSL 5 BASIC16.97■□□□□ 0.31
LINC00862A6NCI5 VAV1-210ENST00000602142 2620 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
LINC00862A6NCI5 ACD-201ENST00000219251 2052 ntAPPRIS P3 TSL 2 BASIC16.97■□□□□ 0.31
LINC00862A6NCI5 AMDHD1-201ENST00000266736 2260 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
LINC00862A6NCI5 AL022341.2-201ENST00000573609 1417 ntTSL 3 BASIC16.96■□□□□ 0.31
LINC00862A6NCI5 ZPBP2-201ENST00000348931 1543 ntAPPRIS P4 TSL 1 (best) BASIC16.96■□□□□ 0.31
LINC00862A6NCI5 SOD3-201ENST00000382120 1526 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
LINC00862A6NCI5 RGS9BP-201ENST00000334176 2894 ntAPPRIS P1 BASIC16.96■□□□□ 0.31
LINC00862A6NCI5 LSM4-203ENST00000593829 1908 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
LINC00862A6NCI5 FBLN7-202ENST00000331203 2301 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
LINC00862A6NCI5 FLT1-209ENST00000639477 6337 ntTSL 5 BASIC16.96■□□□□ 0.31
LINC00862A6NCI5 GAS2L1-208ENST00000616432 2925 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
LINC00862A6NCI5 CACNA1I-204ENST00000407673 5952 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
LINC00862A6NCI5 AC016910.1-201ENST00000422799 1046 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
LINC00862A6NCI5 MDFIC-206ENST00000448022 484 ntTSL 2 BASIC16.96■□□□□ 0.31
LINC00862A6NCI5 STK32C-205ENST00000456004 607 ntTSL 2 BASIC16.96■□□□□ 0.31
LINC00862A6NCI5 UBALD2-203ENST00000589240 660 ntTSL 2 BASIC16.96■□□□□ 0.31
LINC00862A6NCI5 EPB41L4A-AS2-201ENST00000623705 1396 ntBASIC16.96■□□□□ 0.31
LINC00862A6NCI5 PPP1R12B-202ENST00000356764 1687 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
LINC00862A6NCI5 ZNF446-207ENST00000610298 1869 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
LINC00862A6NCI5 HSPB8-201ENST00000281938 2152 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
LINC00862A6NCI5 TDRP-201ENST00000324079 3395 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
LINC00862A6NCI5 FOXP1-214ENST00000493089 2703 ntAPPRIS ALT1 TSL 2 BASIC16.96■□□□□ 0.3
LINC00862A6NCI5 RSAD1-201ENST00000258955 2528 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
LINC00862A6NCI5 ZDHHC8P1-204ENST00000433168 2309 ntTSL 2 BASIC16.96■□□□□ 0.3
LINC00862A6NCI5 AL359710.1-201ENST00000427039 1544 ntTSL 2 BASIC16.96■□□□□ 0.3
LINC00862A6NCI5 CDKN1B-201ENST00000228872 2657 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
LINC00862A6NCI5 MTSS1L-201ENST00000338779 4992 ntAPPRIS P2 TSL 1 (best) BASIC16.95■□□□□ 0.3
LINC00862A6NCI5 RABL6-201ENST00000311502 3091 ntAPPRIS P3 TSL 1 (best) BASIC16.95■□□□□ 0.3
LINC00862A6NCI5 TBP-202ENST00000392092 1903 ntAPPRIS P3 TSL 1 (best) BASIC16.95■□□□□ 0.3
LINC00862A6NCI5 CDH5-204ENST00000563425 1932 ntTSL 5 BASIC16.95■□□□□ 0.3
LINC00862A6NCI5 TRA2A-212ENST00000621813 1931 ntAPPRIS ALT2 TSL 2 BASIC16.95■□□□□ 0.3
LINC00862A6NCI5 TBC1D19-201ENST00000264866 2263 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
LINC00862A6NCI5 PAPOLA-225ENST00000557471 1421 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
LINC00862A6NCI5 GPR157-201ENST00000377411 5265 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
LINC00862A6NCI5 DENND2D-202ENST00000369752 1894 ntAPPRIS ALT2 TSL 2 BASIC16.95■□□□□ 0.3
LINC00862A6NCI5 BID-203ENST00000399765 1879 ntTSL 2 BASIC16.95■□□□□ 0.3
LINC00862A6NCI5 KDM2A-202ENST00000398645 6511 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
LINC00862A6NCI5 HNRNPLL-202ENST00000358367 2779 ntTSL 5 BASIC16.94■□□□□ 0.3
LINC00862A6NCI5 PRKCB-202ENST00000321728 2689 ntAPPRIS ALT1 TSL 1 (best) BASIC16.94■□□□□ 0.3
LINC00862A6NCI5 AP004607.7-201ENST00000527152 1677 ntBASIC16.94■□□□□ 0.3
LINC00862A6NCI5 AKAP8L-201ENST00000397410 2146 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
LINC00862A6NCI5 PSMB11-201ENST00000408907 2110 ntAPPRIS P1 BASIC16.94■□□□□ 0.3
LINC00862A6NCI5 UBE2H-201ENST00000355621 5151 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
LINC00862A6NCI5 DOLPP1-203ENST00000406974 2037 ntTSL 2 BASIC16.94■□□□□ 0.3
LINC00862A6NCI5 SHANK3-203ENST00000445220 5175 ntAPPRIS ALT2 TSL 5 BASIC16.94■□□□□ 0.3
LINC00862A6NCI5 PIP5K1C-205ENST00000589578 2933 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
LINC00862A6NCI5 GTF2IP1-210ENST00000622829 3605 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
LINC00862A6NCI5 AC007225.1-201ENST00000566331 1836 ntBASIC16.94■□□□□ 0.3
LINC00862A6NCI5 OGG1-205ENST00000344629 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
LINC00862A6NCI5 LMO4-202ENST00000370544 5405 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
LINC00862A6NCI5 ALKAL1-201ENST00000358543 1217 ntAPPRIS P2 TSL 1 (best) BASIC16.94■□□□□ 0.3
LINC00862A6NCI5 MARCH2-202ENST00000381035 1192 ntTSL 5 BASIC16.94■□□□□ 0.3
LINC00862A6NCI5 RPL27A-206ENST00000530022 878 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
LINC00862A6NCI5 FGF7P6-201ENST00000377614 1890 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
LINC00862A6NCI5 BX664615.2-202ENST00000639056 1888 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
LINC00862A6NCI5 MFSD3-201ENST00000301327 1548 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
LINC00862A6NCI5 PLK3-201ENST00000372201 2492 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
LINC00862A6NCI5 WNT8B-201ENST00000343737 2112 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
LINC00862A6NCI5 HOXB1-201ENST00000239174 2020 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
LINC00862A6NCI5 ZBTB45-202ENST00000594051 2541 ntAPPRIS P1 TSL 2 BASIC16.94■□□□□ 0.3
LINC00862A6NCI5 AL390961.4-201ENST00000623958 2535 ntBASIC16.94■□□□□ 0.3
LINC00862A6NCI5 ANKS3-201ENST00000304283 2662 ntAPPRIS P1 TSL 2 BASIC16.93■□□□□ 0.3
LINC00862A6NCI5 CD55-205ENST00000367067 1843 ntAPPRIS ALT2 TSL 5 BASIC16.93■□□□□ 0.3
LINC00862A6NCI5 FBXL18-205ENST00000620087 2076 ntTSL 5 BASIC16.93■□□□□ 0.3
LINC00862A6NCI5 PDLIM3-201ENST00000284767 2589 ntTSL 5 BASIC16.93■□□□□ 0.3
LINC00862A6NCI5 RASGRP2-207ENST00000377497 2221 ntAPPRIS P2 TSL 1 (best) BASIC16.93■□□□□ 0.3
LINC00862A6NCI5 USP36-203ENST00000542802 6063 ntAPPRIS P2 TSL 1 (best) BASIC16.93■□□□□ 0.3
LINC00862A6NCI5 GGT2-201ENST00000401924 2366 ntAPPRIS P1 TSL 5 BASIC16.93■□□□□ 0.3
LINC00862A6NCI5 TUB-201ENST00000299506 2019 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
LINC00862A6NCI5 EVX1-201ENST00000222761 1500 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
LINC00862A6NCI5 RAB11FIP5-201ENST00000258098 4342 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
LINC00862A6NCI5 AP006261.1-201ENST00000584783 668 ntBASIC16.93■□□□□ 0.3
LINC00862A6NCI5 AC087482.1-204ENST00000636067 2431 ntTSL 5 BASIC16.93■□□□□ 0.3
LINC00862A6NCI5 GNAI1-201ENST00000351004 3347 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
LINC00862A6NCI5 UBE2K-203ENST00000445950 2175 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
LINC00862A6NCI5 BCKDK-202ENST00000287507 1907 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
LINC00862A6NCI5 B4GALT2-204ENST00000434555 1923 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
LINC00862A6NCI5 ABCG4-206ENST00000622721 2553 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
LINC00862A6NCI5 KIF26A-202ENST00000423312 5649 ntAPPRIS P2 TSL 5 BASIC16.93■□□□□ 0.3
LINC00862A6NCI5 RNPS1-202ENST00000320225 2241 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
LINC00862A6NCI5 FAM222A-202ENST00000538780 3294 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
LINC00862A6NCI5 KANSL1-218ENST00000638275 5352 ntTSL 5 BASIC16.93■□□□□ 0.3
LINC00862A6NCI5 SNX27-204ENST00000458013 6403 ntAPPRIS ALT1 TSL 5 BASIC16.93■□□□□ 0.3
LINC00862A6NCI5 MEN1-201ENST00000312049 2761 ntAPPRIS ALT1 TSL 1 (best) BASIC16.93■□□□□ 0.3
LINC00862A6NCI5 SERPINF2-202ENST00000382061 2265 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
LINC00862A6NCI5 PWWP2AP1-201ENST00000429776 2273 ntBASIC16.93■□□□□ 0.3
LINC00862A6NCI5 SLC43A3-225ENST00000533524 1879 ntAPPRIS ALT2 TSL 2 BASIC16.93■□□□□ 0.3
LINC00862A6NCI5 SREBF2-209ENST00000612482 5365 ntTSL 5 BASIC16.92■□□□□ 0.3
LINC00862A6NCI5 EMILIN2-201ENST00000254528 5910 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
LINC00862A6NCI5 CDK11A-205ENST00000378633 2458 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
LINC00862A6NCI5 POLR3E-209ENST00000564209 2464 ntTSL 2 BASIC16.92■□□□□ 0.3
LINC00862A6NCI5 EWSR1-207ENST00000406548 2207 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
LINC00862A6NCI5 KDM1A-202ENST00000400181 3059 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
LINC00862A6NCI5 SLC3A2-202ENST00000377889 1993 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
LINC00862A6NCI5 HINT2-201ENST00000259667 628 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
LINC00862A6NCI5 WIPI2-203ENST00000401525 2112 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
LINC00862A6NCI5 CHST11-203ENST00000547956 936 ntTSL 2 BASIC16.92■□□□□ 0.3
LINC00862A6NCI5 AC018755.3-202ENST00000596210 929 ntBASIC16.92■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 18.9 ms