Protein–RNA interactions for Protein: A1A4V9

CCDC189, Coiled-coil domain-containing protein 189, humanhuman

Predictions only

Length 331 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC189A1A4V9 PRR20B-201ENST00000377930 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
CCDC189A1A4V9 PRR20A-201ENST00000377931 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
CCDC189A1A4V9 PRR20E-201ENST00000434815 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
CCDC189A1A4V9 PRR20D-201ENST00000452123 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
CCDC189A1A4V9 PRR20C-201ENST00000544357 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
CCDC189A1A4V9 PRR20C-202ENST00000614894 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
CCDC189A1A4V9 SCARF1-202ENST00000348987 2619 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
CCDC189A1A4V9 MYO1C-203ENST00000438665 4898 ntAPPRIS ALT1 TSL 5 BASIC20.73■□□□□ 0.91
CCDC189A1A4V9 LLGL2-202ENST00000375227 1374 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
CCDC189A1A4V9 AC055733.4-201ENST00000638462 1354 ntBASIC20.73■□□□□ 0.91
CCDC189A1A4V9 YBX3-202ENST00000279550 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
CCDC189A1A4V9 MARK2-209ENST00000509502 2862 ntAPPRIS ALT2 TSL 2 BASIC20.73■□□□□ 0.91
CCDC189A1A4V9 FNDC10-201ENST00000422725 2085 ntAPPRIS P1 BASIC20.73■□□□□ 0.91
CCDC189A1A4V9 KMT5A-201ENST00000330479 3069 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
CCDC189A1A4V9 FMR1-208ENST00000440235 4271 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
CCDC189A1A4V9 HES4-201ENST00000304952 899 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
CCDC189A1A4V9 CCDC107-203ENST00000378407 899 ntAPPRIS ALT2 TSL 2 BASIC20.73■□□□□ 0.91
CCDC189A1A4V9 FXN-202ENST00000396364 980 ntTSL 5 BASIC20.73■□□□□ 0.91
CCDC189A1A4V9 CAMTA1-208ENST00000473578 567 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
CCDC189A1A4V9 FAM213B-205ENST00000444521 2827 ntAPPRIS ALT2 TSL 2 BASIC20.73■□□□□ 0.91
CCDC189A1A4V9 PDCD2-204ENST00000453163 2657 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
CCDC189A1A4V9 PCSK6-214ENST00000611716 4409 ntAPPRIS P4 TSL 1 (best) BASIC20.73■□□□□ 0.91
CCDC189A1A4V9 TCAIM-203ENST00000396078 2178 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
CCDC189A1A4V9 TRAPPC12-201ENST00000324266 2508 ntAPPRIS P2 TSL 1 (best) BASIC20.73■□□□□ 0.91
CCDC189A1A4V9 IFNGR2-203ENST00000405436 1684 ntTSL 5 BASIC20.73■□□□□ 0.91
CCDC189A1A4V9 ALX3-201ENST00000369792 1859 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
CCDC189A1A4V9 BRSK1-202ENST00000326848 2095 ntTSL 5 BASIC20.73■□□□□ 0.91
CCDC189A1A4V9 PXYLP1-203ENST00000502783 2066 ntTSL 2 BASIC20.73■□□□□ 0.91
CCDC189A1A4V9 MAPK8IP1-201ENST00000241014 3050 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
CCDC189A1A4V9 GRIK4-205ENST00000527524 5861 ntAPPRIS P1 TSL 2 BASIC20.72■□□□□ 0.91
CCDC189A1A4V9 AL049796.1-201ENST00000565336 1766 ntBASIC20.72■□□□□ 0.91
CCDC189A1A4V9 CDK11B-201ENST00000340677 2534 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
CCDC189A1A4V9 HOMEZ-201ENST00000357460 4971 ntAPPRIS P2 TSL 1 (best) BASIC20.72■□□□□ 0.91
CCDC189A1A4V9 ENGASE-205ENST00000579016 2579 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
CCDC189A1A4V9 IL17RE-206ENST00000454190 2757 ntTSL 2 BASIC20.72■□□□□ 0.91
CCDC189A1A4V9 EPHX3-201ENST00000221730 1822 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
CCDC189A1A4V9 GRINA-202ENST00000395068 1814 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
CCDC189A1A4V9 ECHDC1-214ENST00000474289 2443 ntAPPRIS P3 TSL 5 BASIC20.72■□□□□ 0.91
CCDC189A1A4V9 AC099791.1-201ENST00000416440 715 ntBASIC20.72■□□□□ 0.91
CCDC189A1A4V9 PEMT-206ENST00000435340 960 ntTSL 5 BASIC20.72■□□□□ 0.91
CCDC189A1A4V9 FAM174B-207ENST00000555748 866 ntAPPRIS ALT2 TSL 3 BASIC20.72■□□□□ 0.91
CCDC189A1A4V9 TRAPPC6A-205ENST00000592647 514 ntTSL 2 BASIC20.72■□□□□ 0.91
CCDC189A1A4V9 MADCAM1-208ENST00000621286 1203 ntAPPRIS ALT2 TSL 5 BASIC20.72■□□□□ 0.91
CCDC189A1A4V9 PRR7-201ENST00000323249 1480 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
CCDC189A1A4V9 TUBA4A-202ENST00000392088 2499 ntTSL 2 BASIC20.72■□□□□ 0.91
CCDC189A1A4V9 TERF2IP-201ENST00000300086 2118 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
CCDC189A1A4V9 FAM129C-207ENST00000599124 1918 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
CCDC189A1A4V9 NARF-205ENST00000412079 1760 ntTSL 5 BASIC20.72■□□□□ 0.91
CCDC189A1A4V9 C12orf76-203ENST00000546651 1755 ntTSL 2 BASIC20.72■□□□□ 0.91
CCDC189A1A4V9 ARHGEF7-202ENST00000317133 4361 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
CCDC189A1A4V9 OLA1-204ENST00000409546 2071 ntTSL 5 BASIC20.71■□□□□ 0.91
CCDC189A1A4V9 CBWD3-202ENST00000377342 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
CCDC189A1A4V9 MEN1-206ENST00000377321 2614 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
CCDC189A1A4V9 CBFA2T2-201ENST00000342704 2864 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
CCDC189A1A4V9 TTC39C-202ENST00000317571 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
CCDC189A1A4V9 ANKRD63-201ENST00000434396 1143 ntAPPRIS P1 BASIC20.71■□□□□ 0.91
CCDC189A1A4V9 CHTF8-208ENST00000522091 863 ntTSL 2 BASIC20.71■□□□□ 0.91
CCDC189A1A4V9 OTUB1-212ENST00000543988 1259 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
CCDC189A1A4V9 ACAP1-206ENST00000571471 320 ntTSL 2 BASIC20.71■□□□□ 0.91
CCDC189A1A4V9 ZNF846-212ENST00000592859 1206 ntTSL 2 BASIC20.71■□□□□ 0.91
CCDC189A1A4V9 AC008764.7-201ENST00000593779 1081 ntBASIC20.71■□□□□ 0.91
CCDC189A1A4V9 JADE2-204ENST00000402835 2797 ntTSL 5 BASIC20.71■□□□□ 0.91
CCDC189A1A4V9 PHF2-202ENST00000375376 3045 ntTSL 5 BASIC20.71■□□□□ 0.91
CCDC189A1A4V9 SLC2A11-202ENST00000316185 1555 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
CCDC189A1A4V9 GFRA3-202ENST00000378362 1837 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
CCDC189A1A4V9 RASA4CP-201ENST00000424092 1398 ntBASIC20.71■□□□□ 0.91
CCDC189A1A4V9 DLGAP4-206ENST00000475894 3110 ntAPPRIS ALT2 TSL 2 BASIC20.71■□□□□ 0.91
CCDC189A1A4V9 LEMD2-214ENST00000614475 2883 ntAPPRIS P1 TSL 5 BASIC20.71■□□□□ 0.91
CCDC189A1A4V9 YTHDF3-213ENST00000621820 2363 ntTSL 2 BASIC20.71■□□□□ 0.91
CCDC189A1A4V9 CORO1B-202ENST00000393893 1931 ntAPPRIS P1 TSL 5 BASIC20.7■□□□□ 0.91
CCDC189A1A4V9 GGA2-211ENST00000567468 1713 ntTSL 2 BASIC20.7■□□□□ 0.9
CCDC189A1A4V9 JPT1-206ENST00000476258 2289 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
CCDC189A1A4V9 PDXDC1-205ENST00000535621 2048 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
CCDC189A1A4V9 ARFRP1-214ENST00000622789 2559 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
CCDC189A1A4V9 SYT7-201ENST00000263846 4854 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
CCDC189A1A4V9 MIR572-201ENST00000384983 95 ntBASIC20.7■□□□□ 0.9
CCDC189A1A4V9 AL355001.2-201ENST00000620617 1191 ntBASIC20.7■□□□□ 0.9
CCDC189A1A4V9 AC105233.4-201ENST00000642045 216 ntBASIC20.7■□□□□ 0.9
CCDC189A1A4V9 PANK1-201ENST00000307534 6976 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
CCDC189A1A4V9 BHLHE22-201ENST00000321870 3262 ntAPPRIS P1 BASIC20.7■□□□□ 0.9
CCDC189A1A4V9 STX5-203ENST00000394690 1568 ntTSL 5 BASIC20.7■□□□□ 0.9
CCDC189A1A4V9 VDAC1-203ENST00000395047 1873 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
CCDC189A1A4V9 LYPD1-202ENST00000397463 1891 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
CCDC189A1A4V9 ZNF74-203ENST00000403682 2789 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
CCDC189A1A4V9 SERBP1-202ENST00000370990 1621 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
CCDC189A1A4V9 NAE1-203ENST00000379463 1909 ntTSL 2 BASIC20.7■□□□□ 0.9
CCDC189A1A4V9 PTPN12-201ENST00000248594 3406 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
CCDC189A1A4V9 TJP1-208ENST00000495972 2890 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
CCDC189A1A4V9 ZNF622-201ENST00000308683 1699 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
CCDC189A1A4V9 SPRTN-201ENST00000008440 1667 ntTSL 2 BASIC20.7■□□□□ 0.9
CCDC189A1A4V9 WWTR1-AS1-202ENST00000479752 1700 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
CCDC189A1A4V9 ESR2-212ENST00000556275 2695 ntTSL 2 BASIC20.7■□□□□ 0.9
CCDC189A1A4V9 SOCS3-201ENST00000330871 2734 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
CCDC189A1A4V9 STARD3-201ENST00000336308 2132 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
CCDC189A1A4V9 PKP3-201ENST00000331563 2809 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
CCDC189A1A4V9 BX005040.4-201ENST00000637145 1518 ntBASIC20.69■□□□□ 0.9
CCDC189A1A4V9 TMEM125-201ENST00000432792 1850 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
CCDC189A1A4V9 CLN8-213ENST00000637156 1897 ntAPPRIS P1 TSL 5 BASIC20.69■□□□□ 0.9
CCDC189A1A4V9 SEPHS1-206ENST00000545675 2988 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
CCDC189A1A4V9 KRTAP17-1-201ENST00000334202 779 ntAPPRIS P1 BASIC20.69■□□□□ 0.9
Retrieved 100 of 98,524 protein–RNA pairs in 17.3 ms