Protein–RNA interactions for Protein: Q9BSH3

NICN1, Nicolin-1, humanhuman

Predictions only

Length 213 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NICN1Q9BSH3 ZFP64-206ENST00000371523 2234 ntTSL 2 BASIC17.84■□□□□ 0.45
NICN1Q9BSH3 AL158151.1-201ENST00000372490 2047 ntTSL 2 BASIC17.84■□□□□ 0.45
NICN1Q9BSH3 NGLY1-204ENST00000396649 2024 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
NICN1Q9BSH3 RGMA-210ENST00000557301 1929 ntAPPRIS ALT2 TSL 2 BASIC17.84■□□□□ 0.45
NICN1Q9BSH3 RXFP3-201ENST00000330120 1852 ntAPPRIS P1 BASIC17.84■□□□□ 0.45
NICN1Q9BSH3 PGAM5-204ENST00000543955 1773 ntTSL 2 BASIC17.84■□□□□ 0.45
NICN1Q9BSH3 CKMT1B-207ENST00000441322 1747 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
NICN1Q9BSH3 SLC2A11-202ENST00000316185 1555 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
NICN1Q9BSH3 FAM43B-201ENST00000332947 2572 ntAPPRIS P1 BASIC17.84■□□□□ 0.45
NICN1Q9BSH3 SNX3-202ENST00000349379 890 ntTSL 2 BASIC17.84■□□□□ 0.45
NICN1Q9BSH3 TMEM134-202ENST00000393877 823 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
NICN1Q9BSH3 TMEM80-201ENST00000397510 1094 ntAPPRIS P2 TSL 5 BASIC17.84■□□□□ 0.45
NICN1Q9BSH3 CKLF-205ENST00000417030 628 ntAPPRIS ALT2 TSL 4 BASIC17.84■□□□□ 0.45
NICN1Q9BSH3 AC004707.1-201ENST00000511627 715 ntTSL 3 BASIC17.84■□□□□ 0.45
NICN1Q9BSH3 SMUG1P1-201ENST00000590640 811 ntBASIC17.84■□□□□ 0.45
NICN1Q9BSH3 TMC6-218ENST00000591436 1155 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
NICN1Q9BSH3 ACHE-204ENST00000412389 2218 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
NICN1Q9BSH3 AP000679.1-202ENST00000319763 2081 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
NICN1Q9BSH3 C3orf70-201ENST00000335012 5901 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
NICN1Q9BSH3 CERS1-202ENST00000542296 1947 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
NICN1Q9BSH3 PGAM5-203ENST00000498926 2834 ntAPPRIS P1 TSL 2 BASIC17.84■□□□□ 0.45
NICN1Q9BSH3 PXK-203ENST00000383715 1756 ntTSL 5 BASIC17.84■□□□□ 0.45
NICN1Q9BSH3 KCNS2-201ENST00000287042 5219 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
NICN1Q9BSH3 TM7SF2-201ENST00000279263 1722 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
NICN1Q9BSH3 KCNQ5-202ENST00000355194 6566 ntAPPRIS ALT1 TSL 5 BASIC17.83■□□□□ 0.45
NICN1Q9BSH3 KCNQ5-206ENST00000402622 6596 ntAPPRIS ALT2 TSL 5 BASIC17.83■□□□□ 0.45
NICN1Q9BSH3 SLC25A39-201ENST00000225308 1607 ntAPPRIS P3 TSL 1 (best) BASIC17.83■□□□□ 0.45
NICN1Q9BSH3 PROSER2-205ENST00000622831 1646 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.45
NICN1Q9BSH3 KIF26A-202ENST00000423312 5649 ntAPPRIS P2 TSL 5 BASIC17.83■□□□□ 0.45
NICN1Q9BSH3 PCDHAC2-203ENST00000615316 3011 ntBASIC17.83■□□□□ 0.45
NICN1Q9BSH3 WDR4-202ENST00000398208 2122 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
NICN1Q9BSH3 ERF-202ENST00000440177 2032 ntTSL 2 BASIC17.83■□□□□ 0.45
NICN1Q9BSH3 CCDC166-201ENST00000542437 1320 ntAPPRIS P1 TSL 2 BASIC17.83■□□□□ 0.44
NICN1Q9BSH3 FMN2-201ENST00000319653 6434 ntAPPRIS P1 TSL 5 BASIC17.83■□□□□ 0.44
NICN1Q9BSH3 MYO1D-213ENST00000583621 1916 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
NICN1Q9BSH3 C9orf47-202ENST00000375850 859 ntAPPRIS ALT2 TSL 3 BASIC17.83■□□□□ 0.44
NICN1Q9BSH3 AL356441.2-201ENST00000443009 864 ntBASIC17.83■□□□□ 0.44
NICN1Q9BSH3 ADAMTS19-205ENST00000638972 5089 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
NICN1Q9BSH3 GFRA3-202ENST00000378362 1837 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.44
NICN1Q9BSH3 EEF1D-246ENST00000532741 2387 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
NICN1Q9BSH3 CBWD6-201ENST00000377391 1792 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
NICN1Q9BSH3 CBWD3-202ENST00000377342 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.44
NICN1Q9BSH3 PANO1-201ENST00000620120 1680 ntAPPRIS P1 BASIC17.83■□□□□ 0.44
NICN1Q9BSH3 SPRTN-201ENST00000008440 1667 ntTSL 2 BASIC17.83■□□□□ 0.44
NICN1Q9BSH3 KDELR1-203ENST00000597017 1594 ntTSL 2 BASIC17.83■□□□□ 0.44
NICN1Q9BSH3 SDHAF3-202ENST00000432641 2060 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
NICN1Q9BSH3 CASP9-210ENST00000546424 4463 ntAPPRIS ALT2 TSL 5 BASIC17.82■□□□□ 0.44
NICN1Q9BSH3 SENP5-204ENST00000445299 2491 ntTSL 2 BASIC17.82■□□□□ 0.44
NICN1Q9BSH3 IRF7-201ENST00000330243 1992 ntAPPRIS P4 TSL 5 BASIC17.82■□□□□ 0.44
NICN1Q9BSH3 EEF1D-201ENST00000317198 1458 ntAPPRIS ALT2 TSL 5 BASIC17.82■□□□□ 0.44
NICN1Q9BSH3 RCN3-201ENST00000270645 1859 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
NICN1Q9BSH3 SMIM11B-205ENST00000624304 1863 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
NICN1Q9BSH3 GSG1L-202ENST00000395724 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
NICN1Q9BSH3 GRB10-201ENST00000335866 5032 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
NICN1Q9BSH3 PIF1-202ENST00000333425 2278 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
NICN1Q9BSH3 HDGFL2-208ENST00000616600 2281 ntAPPRIS P3 TSL 1 (best) BASIC17.82■□□□□ 0.44
NICN1Q9BSH3 ESR2-212ENST00000556275 2695 ntTSL 2 BASIC17.82■□□□□ 0.44
NICN1Q9BSH3 APBB3-203ENST00000357560 2218 ntAPPRIS P3 TSL 5 BASIC17.82■□□□□ 0.44
NICN1Q9BSH3 CLDN23-201ENST00000519106 2169 ntAPPRIS P1 BASIC17.82■□□□□ 0.44
NICN1Q9BSH3 CYP1B1-207ENST00000614273 2174 ntAPPRIS P1 TSL 5 BASIC17.82■□□□□ 0.44
NICN1Q9BSH3 SH2B1-202ENST00000337120 6043 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
NICN1Q9BSH3 SUMF1-205ENST00000458465 1102 ntTSL 2 BASIC17.82■□□□□ 0.44
NICN1Q9BSH3 C15orf61-202ENST00000557807 769 ntTSL 2 BASIC17.82■□□□□ 0.44
NICN1Q9BSH3 CTAG1A-201ENST00000593606 993 ntTSL 5 BASIC17.82■□□□□ 0.44
NICN1Q9BSH3 SF1-220ENST00000626028 704 ntTSL 2 BASIC17.82■□□□□ 0.44
NICN1Q9BSH3 RAB5A-201ENST00000273047 2536 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
NICN1Q9BSH3 LRRC3B-201ENST00000396641 1696 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
NICN1Q9BSH3 PLCD1-201ENST00000334661 2769 ntAPPRIS P3 TSL 1 (best) BASIC17.82■□□□□ 0.44
NICN1Q9BSH3 MUS81-201ENST00000308110 2392 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
NICN1Q9BSH3 CYP21A1P-201ENST00000342991 1971 ntTSL 3 BASIC17.82■□□□□ 0.44
NICN1Q9BSH3 ZFP92-201ENST00000338647 6105 ntAPPRIS P1 TSL 5 BASIC17.82■□□□□ 0.44
NICN1Q9BSH3 SLC25A22-228ENST00000628067 2692 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
NICN1Q9BSH3 ZGPAT-206ENST00000448100 1881 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
NICN1Q9BSH3 TSR1-201ENST00000301364 5188 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
NICN1Q9BSH3 LGI2-201ENST00000382114 6428 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
NICN1Q9BSH3 ASL-203ENST00000380839 1765 ntTSL 5 BASIC17.81■□□□□ 0.44
NICN1Q9BSH3 CRHR1-203ENST00000339069 2490 ntTSL 2 BASIC17.81■□□□□ 0.44
NICN1Q9BSH3 DOCK9-206ENST00000427887 4176 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
NICN1Q9BSH3 PLEKHB1-204ENST00000398494 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC17.81■□□□□ 0.44
NICN1Q9BSH3 DUSP15-201ENST00000278979 1732 ntTSL 2 BASIC17.81■□□□□ 0.44
NICN1Q9BSH3 ABHD12B-201ENST00000337334 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
NICN1Q9BSH3 CHRNA3-202ENST00000348639 2030 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
NICN1Q9BSH3 DNAJC4-202ENST00000321685 1288 ntAPPRIS P3 TSL 1 (best) BASIC17.81■□□□□ 0.44
NICN1Q9BSH3 PYCARD-202ENST00000350605 696 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
NICN1Q9BSH3 PRICKLE4-201ENST00000394259 939 ntAPPRIS ALT2 TSL 5 BASIC17.81■□□□□ 0.44
NICN1Q9BSH3 POLR2F-203ENST00000407936 582 ntTSL 3 BASIC17.81■□□□□ 0.44
NICN1Q9BSH3 MOSPD3-204ENST00000424091 1115 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
NICN1Q9BSH3 POLR2F-207ENST00000460648 518 ntTSL 4 BASIC17.81■□□□□ 0.44
NICN1Q9BSH3 AP001107.5-202ENST00000533759 948 ntTSL 5 BASIC17.81■□□□□ 0.44
NICN1Q9BSH3 MCRIP1-204ENST00000570507 765 ntTSL 2 BASIC17.81■□□□□ 0.44
NICN1Q9BSH3 MCRIP1-208ENST00000575061 618 ntTSL 5 BASIC17.81■□□□□ 0.44
NICN1Q9BSH3 DNAJC4-212ENST00000628077 938 ntTSL 5 BASIC17.81■□□□□ 0.44
NICN1Q9BSH3 EGLN2-202ENST00000406058 2150 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
NICN1Q9BSH3 CNTNAP3B-212ENST00000617422 2170 ntTSL 2 BASIC17.81■□□□□ 0.44
NICN1Q9BSH3 GNA14-201ENST00000341700 2482 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
NICN1Q9BSH3 WNK2-204ENST00000427277 6108 ntTSL 5 BASIC17.81■□□□□ 0.44
NICN1Q9BSH3 NXN-201ENST00000336868 3036 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
NICN1Q9BSH3 MON1A-201ENST00000296473 2370 ntAPPRIS P3 TSL 1 (best) BASIC17.81■□□□□ 0.44
NICN1Q9BSH3 MAP4K4-210ENST00000425019 4403 ntTSL 5 BASIC17.81■□□□□ 0.44
NICN1Q9BSH3 ZNRF1-202ENST00000335325 4620 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 28.9 ms