Protein–RNA interactions for Protein: Q99603

TRGV9, T-cell receptor gamma variable 9 (Fragment), humanhuman

Predictions only

Length 122 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRGV9Q99603 SUMF2-208ENST00000434526 2052 ntAPPRIS P3 TSL 1 (best) BASIC16.24■□□□□ 0.19
TRGV9Q99603 KRTAP17-1-201ENST00000334202 779 ntAPPRIS P1 BASIC16.24■□□□□ 0.19
TRGV9Q99603 FAM219A-202ENST00000379078 770 ntTSL 3 BASIC16.24■□□□□ 0.19
TRGV9Q99603 MAST4-205ENST00000406039 717 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
TRGV9Q99603 KDELR3-202ENST00000409006 931 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
TRGV9Q99603 MFF-208ENST00000409616 1247 ntTSL 5 BASIC16.24■□□□□ 0.19
TRGV9Q99603 RNF146-206ENST00000480444 843 ntTSL 2 BASIC16.24■□□□□ 0.19
TRGV9Q99603 NRL-205ENST00000560550 788 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
TRGV9Q99603 ZNF846-212ENST00000592859 1206 ntTSL 2 BASIC16.24■□□□□ 0.19
TRGV9Q99603 ZNF584-205ENST00000596281 575 ntTSL 2 BASIC16.24■□□□□ 0.19
TRGV9Q99603 MADCAM1-208ENST00000621286 1203 ntAPPRIS ALT2 TSL 5 BASIC16.24■□□□□ 0.19
TRGV9Q99603 AC073314.1-201ENST00000568729 2216 ntBASIC16.24■□□□□ 0.19
TRGV9Q99603 CDIPT-202ENST00000561555 1726 ntTSL 2 BASIC16.24■□□□□ 0.19
TRGV9Q99603 DEDD2-201ENST00000336034 1882 ntAPPRIS ALT1 TSL 1 (best) BASIC16.24■□□□□ 0.19
TRGV9Q99603 CHRNA3-202ENST00000348639 2030 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
TRGV9Q99603 FBXL15-202ENST00000369956 2344 ntAPPRIS ALT1 TSL 1 (best) BASIC16.24■□□□□ 0.19
TRGV9Q99603 KCNK6-201ENST00000263372 5722 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
TRGV9Q99603 TMEFF1-201ENST00000374879 2611 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
TRGV9Q99603 RCN2-202ENST00000394883 1366 ntTSL 5 BASIC16.24■□□□□ 0.19
TRGV9Q99603 SDR39U1-208ENST00000554698 1364 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
TRGV9Q99603 NEURL4-203ENST00000570460 4890 ntAPPRIS ALT2 TSL 5 BASIC16.24■□□□□ 0.19
TRGV9Q99603 PKIB-206ENST00000392490 1811 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
TRGV9Q99603 NTN4-207ENST00000553059 1818 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
TRGV9Q99603 SLC46A3-202ENST00000380814 2121 ntAPPRIS ALT1 TSL 1 (best) BASIC16.24■□□□□ 0.19
TRGV9Q99603 ABLIM2-204ENST00000407564 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
TRGV9Q99603 SCRT1-201ENST00000569446 3779 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
TRGV9Q99603 SLC17A7-201ENST00000221485 2973 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
TRGV9Q99603 AP000679.1-202ENST00000319763 2081 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
TRGV9Q99603 CTU2-210ENST00000567949 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
TRGV9Q99603 RDX-202ENST00000405097 2761 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
TRGV9Q99603 CYP1B1-207ENST00000614273 2174 ntAPPRIS P1 TSL 5 BASIC16.23■□□□□ 0.19
TRGV9Q99603 CCNE1-201ENST00000262643 2043 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
TRGV9Q99603 PPP1CC-201ENST00000335007 2559 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
TRGV9Q99603 AC092667.1-201ENST00000434301 2586 ntBASIC16.23■□□□□ 0.19
TRGV9Q99603 ECHDC2-221ENST00000536120 1446 ntTSL 3 BASIC16.23■□□□□ 0.19
TRGV9Q99603 ORMDL1-202ENST00000392349 1137 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
TRGV9Q99603 TOLLIP-208ENST00000527938 549 ntTSL 4 BASIC16.23■□□□□ 0.19
TRGV9Q99603 OTUB1-212ENST00000543988 1259 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
TRGV9Q99603 AC090241.2-201ENST00000602329 432 ntTSL 4 BASIC16.23■□□□□ 0.19
TRGV9Q99603 PRMT1-221ENST00000610806 1192 ntTSL 3 BASIC16.23■□□□□ 0.19
TRGV9Q99603 NBPF26-209ENST00000624419 1133 ntTSL 5 BASIC16.23■□□□□ 0.19
TRGV9Q99603 AC092902.2-206ENST00000625484 846 ntTSL 5 BASIC16.23■□□□□ 0.19
TRGV9Q99603 MANEAL-202ENST00000373045 2685 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
TRGV9Q99603 BX005040.4-201ENST00000637145 1518 ntBASIC16.23■□□□□ 0.19
TRGV9Q99603 PABPC4-204ENST00000372862 2470 ntTSL 5 BASIC16.23■□□□□ 0.19
TRGV9Q99603 TYMP-202ENST00000395678 1614 ntAPPRIS P3 TSL 1 (best) BASIC16.23■□□□□ 0.19
TRGV9Q99603 GPR157-201ENST00000377411 5265 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
TRGV9Q99603 NR6A1-202ENST00000373584 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
TRGV9Q99603 SMIM11B-205ENST00000624304 1863 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
TRGV9Q99603 USP36-203ENST00000542802 6063 ntAPPRIS P2 TSL 1 (best) BASIC16.22■□□□□ 0.19
TRGV9Q99603 PRMT8-202ENST00000382622 2366 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
TRGV9Q99603 APBB3-203ENST00000357560 2218 ntAPPRIS P3 TSL 5 BASIC16.22■□□□□ 0.19
TRGV9Q99603 DNAAF3-207ENST00000527223 2228 ntAPPRIS ALT2 TSL 2 BASIC16.22■□□□□ 0.19
TRGV9Q99603 SOX4-201ENST00000244745 5852 ntAPPRIS P1 BASIC16.22■□□□□ 0.19
TRGV9Q99603 AC007225.1-201ENST00000566331 1836 ntBASIC16.22■□□□□ 0.19
TRGV9Q99603 ME2-202ENST00000382927 2492 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
TRGV9Q99603 GLT1D1-204ENST00000442111 2995 ntAPPRIS P1 TSL 5 BASIC16.22■□□□□ 0.19
TRGV9Q99603 SMCO4-201ENST00000298966 1104 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
TRGV9Q99603 HES6-202ENST00000409002 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
TRGV9Q99603 ZEB1-AS1-201ENST00000423714 456 ntTSL 3 BASIC16.22■□□□□ 0.19
TRGV9Q99603 ZFAS1-206ENST00000450535 1075 ntTSL 3 BASIC16.22■□□□□ 0.19
TRGV9Q99603 AC008764.7-201ENST00000593779 1081 ntBASIC16.22■□□□□ 0.19
TRGV9Q99603 MYDGF-203ENST00000599630 713 ntTSL 2 BASIC16.22■□□□□ 0.19
TRGV9Q99603 AC093762.1-201ENST00000641981 837 ntAPPRIS P1 BASIC16.22■□□□□ 0.19
TRGV9Q99603 LYSMD2-201ENST00000267838 1759 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
TRGV9Q99603 GATA6-AS1-202ENST00000583490 1788 ntTSL 2 BASIC16.22■□□□□ 0.19
TRGV9Q99603 MBNL3-202ENST00000370844 1643 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
TRGV9Q99603 LLGL2-202ENST00000375227 1374 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
TRGV9Q99603 C19orf35-201ENST00000342063 2574 ntAPPRIS P1 TSL 2 BASIC16.22■□□□□ 0.19
TRGV9Q99603 RPUSD1-202ENST00000561734 2159 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
TRGV9Q99603 SLC30A5-201ENST00000380860 1317 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
TRGV9Q99603 ADAP1-218ENST00000617043 1946 ntTSL 2 BASIC16.21■□□□□ 0.19
TRGV9Q99603 ZFAND6-224ENST00000618205 1659 ntAPPRIS P1 TSL 5 BASIC16.21■□□□□ 0.19
TRGV9Q99603 RUNX3-202ENST00000338888 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
TRGV9Q99603 PPCS-203ENST00000372561 1431 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
TRGV9Q99603 NAA10-208ENST00000464845 1772 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
TRGV9Q99603 ZFP69B-202ENST00000411995 2109 ntAPPRIS P1 TSL 5 BASIC16.21■□□□□ 0.19
TRGV9Q99603 NUP160-203ENST00000526870 1537 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
TRGV9Q99603 ARFRP1-210ENST00000614942 2554 ntTSL 5 BASIC16.21■□□□□ 0.19
TRGV9Q99603 NRXN2-201ENST00000265459 6621 ntAPPRIS P3 TSL 5 BASIC16.21■□□□□ 0.19
TRGV9Q99603 SCN1B-206ENST00000638536 1600 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
TRGV9Q99603 GRAMD4P2-201ENST00000423297 1097 ntBASIC16.21■□□□□ 0.19
TRGV9Q99603 AC073934.1-201ENST00000490314 495 ntTSL 4 BASIC16.21■□□□□ 0.19
TRGV9Q99603 CDKN2A-206ENST00000494262 989 ntTSL 3 BASIC16.21■□□□□ 0.19
TRGV9Q99603 TPT1-AS1-211ENST00000520622 604 ntTSL 4 BASIC16.21■□□□□ 0.19
TRGV9Q99603 SCO2-204ENST00000543927 1051 ntAPPRIS P1 TSL 2 BASIC16.21■□□□□ 0.19
TRGV9Q99603 AC027682.1-201ENST00000562846 899 ntBASIC16.21■□□□□ 0.19
TRGV9Q99603 JAKMIP1-203ENST00000409371 2420 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
TRGV9Q99603 DALRD3-202ENST00000341949 1739 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
TRGV9Q99603 KCNK17-202ENST00000453413 1706 ntAPPRIS ALT2 TSL 5 BASIC16.21■□□□□ 0.19
TRGV9Q99603 DDX55-205ENST00000538744 1735 ntTSL 5 BASIC16.21■□□□□ 0.19
TRGV9Q99603 NSUN2-206ENST00000506139 2619 ntAPPRIS ALT2 TSL 2 BASIC16.21■□□□□ 0.19
TRGV9Q99603 ANAPC13-204ENST00000510994 1840 ntAPPRIS P1 TSL 2 BASIC16.21■□□□□ 0.19
TRGV9Q99603 ADM-207ENST00000530439 1839 ntTSL 2 BASIC16.21■□□□□ 0.19
TRGV9Q99603 HLA-G-204ENST00000376828 1490 ntAPPRIS ALT2 BASIC16.21■□□□□ 0.19
TRGV9Q99603 KCNMA1-293ENST00000640969 5789 ntAPPRIS ALT2 TSL 5 BASIC16.21■□□□□ 0.19
TRGV9Q99603 TAF6L-201ENST00000294168 2116 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
TRGV9Q99603 BLCAP-208ENST00000414542 2205 ntAPPRIS P1 TSL 3 BASIC16.21■□□□□ 0.18
TRGV9Q99603 PBX1-222ENST00000627490 1769 ntTSL 2 BASIC16.21■□□□□ 0.18
TRGV9Q99603 TMED4-203ENST00000457408 2322 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 20.8 ms