Protein–RNA interactions for Protein: Q8TDG2

ACTRT1, Actin-related protein T1, humanhuman

Predictions only

Length 376 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ACTRT1Q8TDG2 PCDHA13-203ENST00000617769 2427 ntAPPRIS ALT2 BASIC21.74■■□□□ 1.07
ACTRT1Q8TDG2 NARS2-201ENST00000281038 2519 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
ACTRT1Q8TDG2 TTBK1-202ENST00000304139 2449 ntTSL 5 BASIC21.73■■□□□ 1.07
ACTRT1Q8TDG2 TANGO2-217ENST00000456048 2439 ntTSL 2 BASIC21.73■■□□□ 1.07
ACTRT1Q8TDG2 C9orf47-202ENST00000375850 859 ntAPPRIS ALT2 TSL 3 BASIC21.73■■□□□ 1.07
ACTRT1Q8TDG2 INS-202ENST00000381330 597 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
ACTRT1Q8TDG2 KRTAP5-4-201ENST00000399682 1181 ntAPPRIS P5 BASIC21.73■■□□□ 1.07
ACTRT1Q8TDG2 SUMF1-205ENST00000458465 1102 ntTSL 2 BASIC21.73■■□□□ 1.07
ACTRT1Q8TDG2 FBXL22-201ENST00000360587 1526 ntAPPRIS P2 TSL 1 (best) BASIC21.73■■□□□ 1.07
ACTRT1Q8TDG2 BX005040.4-201ENST00000637145 1518 ntBASIC21.73■■□□□ 1.07
ACTRT1Q8TDG2 MAP7D2-203ENST00000443379 2476 ntAPPRIS ALT2 TSL 2 BASIC21.73■■□□□ 1.07
ACTRT1Q8TDG2 MAGI2-201ENST00000354212 6880 ntAPPRIS P3 TSL 1 (best) BASIC21.73■■□□□ 1.07
ACTRT1Q8TDG2 BCAT2-207ENST00000597011 1579 ntTSL 5 BASIC21.73■■□□□ 1.07
ACTRT1Q8TDG2 TSNAXIP1-202ENST00000415766 2338 ntAPPRIS ALT2 TSL 2 BASIC21.73■■□□□ 1.07
ACTRT1Q8TDG2 CACNB2-203ENST00000352115 1911 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
ACTRT1Q8TDG2 NSUN5-204ENST00000438747 1663 ntAPPRIS P4 TSL 1 (best) BASIC21.72■■□□□ 1.07
ACTRT1Q8TDG2 SDHA-220ENST00000617470 1952 ntTSL 5 BASIC21.72■■□□□ 1.07
ACTRT1Q8TDG2 SYTL1-211ENST00000618673 1712 ntTSL 5 BASIC21.72■■□□□ 1.07
ACTRT1Q8TDG2 SSH3-202ENST00000308298 2046 ntTSL 2 BASIC21.72■■□□□ 1.07
ACTRT1Q8TDG2 RARG-204ENST00000543726 1779 ntTSL 2 BASIC21.72■■□□□ 1.07
ACTRT1Q8TDG2 FAM189B-201ENST00000350210 2379 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
ACTRT1Q8TDG2 DNAJC4-202ENST00000321685 1288 ntAPPRIS P3 TSL 1 (best) BASIC21.72■■□□□ 1.07
ACTRT1Q8TDG2 PRICKLE4-201ENST00000394259 939 ntAPPRIS ALT2 TSL 5 BASIC21.72■■□□□ 1.07
ACTRT1Q8TDG2 CCDC115-202ENST00000409127 1247 ntTSL 2 BASIC21.72■■□□□ 1.07
ACTRT1Q8TDG2 BX842568.3-201ENST00000418104 571 ntBASIC21.72■■□□□ 1.07
ACTRT1Q8TDG2 AL390816.2-201ENST00000554252 737 ntTSL 3 BASIC21.72■■□□□ 1.07
ACTRT1Q8TDG2 TMC6-218ENST00000591436 1155 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
ACTRT1Q8TDG2 DNAJC4-212ENST00000628077 938 ntTSL 5 BASIC21.72■■□□□ 1.07
ACTRT1Q8TDG2 USP39-204ENST00000409766 2033 ntTSL 2 BASIC21.72■■□□□ 1.07
ACTRT1Q8TDG2 AL512408.1-201ENST00000569378 2000 ntBASIC21.72■■□□□ 1.07
ACTRT1Q8TDG2 PPCS-203ENST00000372561 1431 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
ACTRT1Q8TDG2 GFRA3-202ENST00000378362 1837 ntAPPRIS ALT2 TSL 1 (best) BASIC21.71■■□□□ 1.07
ACTRT1Q8TDG2 CRTAC1-203ENST00000370597 2890 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
ACTRT1Q8TDG2 PARP2-202ENST00000429687 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC21.71■■□□□ 1.07
ACTRT1Q8TDG2 HMOX2-218ENST00000619913 1908 ntAPPRIS P1 TSL 5 BASIC21.71■■□□□ 1.07
ACTRT1Q8TDG2 MAPK15-201ENST00000338033 1961 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
ACTRT1Q8TDG2 SLC39A5-209ENST00000454355 1968 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
ACTRT1Q8TDG2 AL161908.1-203ENST00000425370 506 ntTSL 2 BASIC21.71■■□□□ 1.07
ACTRT1Q8TDG2 ERGIC1-206ENST00000519860 1000 ntTSL 3 BASIC21.71■■□□□ 1.07
ACTRT1Q8TDG2 PPP1R14A-204ENST00000591291 433 ntTSL 5 BASIC21.71■■□□□ 1.07
ACTRT1Q8TDG2 HOMER3-206ENST00000594439 982 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
ACTRT1Q8TDG2 CENPH-201ENST00000283006 1389 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
ACTRT1Q8TDG2 PACRGL-227ENST00000513459 1773 ntTSL 5 BASIC21.71■■□□□ 1.07
ACTRT1Q8TDG2 LHX6-201ENST00000340587 3457 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
ACTRT1Q8TDG2 ASCL2-201ENST00000331289 1852 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
ACTRT1Q8TDG2 EEF1D-201ENST00000317198 1458 ntAPPRIS ALT2 TSL 5 BASIC21.71■■□□□ 1.07
ACTRT1Q8TDG2 ZNF511-202ENST00000361518 1520 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.07
ACTRT1Q8TDG2 ADRM1-204ENST00000491935 1530 ntAPPRIS P1 TSL 5 BASIC21.7■■□□□ 1.07
ACTRT1Q8TDG2 CHD1L-201ENST00000361293 2484 ntTSL 2 BASIC21.7■■□□□ 1.06
ACTRT1Q8TDG2 TMEM11-201ENST00000317635 2095 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
ACTRT1Q8TDG2 BRSK2-208ENST00000528841 3586 ntAPPRIS ALT2 TSL 1 (best) BASIC21.7■■□□□ 1.06
ACTRT1Q8TDG2 HDHD5-201ENST00000155674 1735 ntAPPRIS P3 TSL 1 (best) BASIC21.7■■□□□ 1.06
ACTRT1Q8TDG2 FAM213A-202ENST00000372185 1723 ntTSL 2 BASIC21.7■■□□□ 1.06
ACTRT1Q8TDG2 SCUBE1-201ENST00000290460 2258 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
ACTRT1Q8TDG2 NGEF-202ENST00000373552 2286 ntAPPRIS P1 TSL 2 BASIC21.7■■□□□ 1.06
ACTRT1Q8TDG2 SLC25A22-216ENST00000531214 1790 ntAPPRIS P1 TSL 2 BASIC21.7■■□□□ 1.06
ACTRT1Q8TDG2 PCMTD2-202ENST00000299468 1049 ntTSL 5 BASIC21.7■■□□□ 1.06
ACTRT1Q8TDG2 TRIR-205ENST00000592273 783 ntTSL 3 BASIC21.7■■□□□ 1.06
ACTRT1Q8TDG2 IVD-206ENST00000487418 1809 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
ACTRT1Q8TDG2 MOGS-201ENST00000233616 2895 ntAPPRIS P3 TSL 1 (best) BASIC21.7■■□□□ 1.06
ACTRT1Q8TDG2 PRMT2-210ENST00000458387 1874 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
ACTRT1Q8TDG2 FP700111.2-201ENST00000619190 1892 ntBASIC21.7■■□□□ 1.06
ACTRT1Q8TDG2 RELL2-205ENST00000518856 1419 ntTSL 5 BASIC21.7■■□□□ 1.06
ACTRT1Q8TDG2 HSD3B7-202ENST00000297679 2172 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
ACTRT1Q8TDG2 CALY-201ENST00000252939 2271 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
ACTRT1Q8TDG2 AR-204ENST00000504326 3615 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
ACTRT1Q8TDG2 GRB14-201ENST00000263915 2382 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
ACTRT1Q8TDG2 LTBP3-201ENST00000301873 4443 ntAPPRIS ALT2 TSL 2 BASIC21.69■■□□□ 1.06
ACTRT1Q8TDG2 HAND2-AS1-237ENST00000616485 2420 ntTSL 2 BASIC21.69■■□□□ 1.06
ACTRT1Q8TDG2 MAP3K14-AS1-203ENST00000585780 2475 ntTSL 2 BASIC21.69■■□□□ 1.06
ACTRT1Q8TDG2 XBP1-203ENST00000403532 1824 ntAPPRIS ALT1 TSL 3 BASIC21.69■■□□□ 1.06
ACTRT1Q8TDG2 TSPAN17-202ENST00000310032 2550 ntTSL 5 BASIC21.69■■□□□ 1.06
ACTRT1Q8TDG2 HPS6-201ENST00000299238 2649 ntAPPRIS P1 BASIC21.69■■□□□ 1.06
ACTRT1Q8TDG2 CAPN12-201ENST00000328867 2762 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
ACTRT1Q8TDG2 SMCO4-201ENST00000298966 1104 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
ACTRT1Q8TDG2 PTMA-205ENST00000410064 814 ntTSL 2 BASIC21.69■■□□□ 1.06
ACTRT1Q8TDG2 DBNL-220ENST00000494774 2117 ntAPPRIS P4 TSL 1 (best) BASIC21.69■■□□□ 1.06
ACTRT1Q8TDG2 PHF2-201ENST00000359246 5569 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
ACTRT1Q8TDG2 PCDHAC2-203ENST00000615316 3011 ntBASIC21.69■■□□□ 1.06
ACTRT1Q8TDG2 FAM102B-201ENST00000370035 5600 ntAPPRIS P2 TSL 1 (best) BASIC21.69■■□□□ 1.06
ACTRT1Q8TDG2 PNMA2-204ENST00000522362 4965 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
ACTRT1Q8TDG2 ECHDC2-221ENST00000536120 1446 ntTSL 3 BASIC21.69■■□□□ 1.06
ACTRT1Q8TDG2 MZF1-203ENST00000594234 2385 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
ACTRT1Q8TDG2 LINC00682-201ENST00000498940 1625 ntTSL 3 BASIC21.69■■□□□ 1.06
ACTRT1Q8TDG2 GPT-205ENST00000528431 1822 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
ACTRT1Q8TDG2 NFYC-204ENST00000372653 1862 ntTSL 2 BASIC21.69■■□□□ 1.06
ACTRT1Q8TDG2 CYP21A2-222ENST00000435122 1914 ntTSL 2 BASIC21.68■■□□□ 1.06
ACTRT1Q8TDG2 C7orf43-206ENST00000456769 2046 ntTSL 2 BASIC21.68■■□□□ 1.06
ACTRT1Q8TDG2 NRP2-206ENST00000417189 2386 ntTSL 2 BASIC21.68■■□□□ 1.06
ACTRT1Q8TDG2 CDCA4-201ENST00000336219 2513 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
ACTRT1Q8TDG2 CDV3-201ENST00000264993 3307 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
ACTRT1Q8TDG2 ZNF696-205ENST00000521537 705 ntTSL 2 BASIC21.68■■□□□ 1.06
ACTRT1Q8TDG2 TGFBR3L-202ENST00000565886 1260 ntAPPRIS P1 TSL 5 BASIC21.68■■□□□ 1.06
ACTRT1Q8TDG2 TRIR-202ENST00000588213 841 ntTSL 3 BASIC21.68■■□□□ 1.06
ACTRT1Q8TDG2 TYMP-202ENST00000395678 1614 ntAPPRIS P3 TSL 1 (best) BASIC21.68■■□□□ 1.06
ACTRT1Q8TDG2 ELOA3B-201ENST00000611323 1641 ntAPPRIS P1 BASIC21.68■■□□□ 1.06
ACTRT1Q8TDG2 ELOA3D-201ENST00000620881 1641 ntAPPRIS P1 BASIC21.68■■□□□ 1.06
ACTRT1Q8TDG2 PYCR3-207ENST00000495276 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC21.68■■□□□ 1.06
ACTRT1Q8TDG2 YTHDF3-213ENST00000621820 2363 ntTSL 2 BASIC21.67■■□□□ 1.06
ACTRT1Q8TDG2 EXOC3-AS1-202ENST00000623673 1663 ntBASIC21.67■■□□□ 1.06
Retrieved 100 of 98,524 protein–RNA pairs in 44.1 ms