Protein–RNA interactions for Protein: Q8N3P4

VPS8, Vacuolar protein sorting-associated protein 8 homolog, humanhuman

Predictions only

Length 1,428 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS8Q8N3P4 ZNF263-205ENST00000574253 1139 ntTSL 2 BASIC32.82■■■□□ 2.84
VPS8Q8N3P4 TGIF1-207ENST00000407501 1585 ntAPPRIS P1 TSL 3 BASIC32.82■■■□□ 2.84
VPS8Q8N3P4 CBLN3-201ENST00000267406 2346 ntAPPRIS P1 TSL 1 (best) BASIC32.82■■■□□ 2.84
VPS8Q8N3P4 S1PR5-204ENST00000617721 1698 ntTSL 5 BASIC32.81■■■□□ 2.84
VPS8Q8N3P4 RASSF1-203ENST00000359365 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC32.81■■■□□ 2.84
VPS8Q8N3P4 LMTK3-202ENST00000600059 5113 ntAPPRIS ALT2 TSL 2 BASIC32.81■■■□□ 2.84
VPS8Q8N3P4 GRAMD1A-201ENST00000317991 2695 ntAPPRIS P3 TSL 1 (best) BASIC32.81■■■□□ 2.84
VPS8Q8N3P4 UBE2E3-201ENST00000392415 1347 ntAPPRIS P1 TSL 3 BASIC32.81■■■□□ 2.84
VPS8Q8N3P4 TMEM176B-203ENST00000434545 1303 ntAPPRIS P1 TSL 1 (best) BASIC32.81■■■□□ 2.84
VPS8Q8N3P4 LAG3-202ENST00000441671 1576 ntAPPRIS ALT2 TSL 1 (best) BASIC32.81■■■□□ 2.84
VPS8Q8N3P4 TSC22D3-205ENST00000372390 1812 ntTSL 1 (best) BASIC32.81■■■□□ 2.84
VPS8Q8N3P4 NT5C-201ENST00000245552 954 ntAPPRIS P1 TSL 1 (best) BASIC32.81■■■□□ 2.84
VPS8Q8N3P4 STAG3L3-201ENST00000423834 1262 ntTSL 2 BASIC32.81■■■□□ 2.84
VPS8Q8N3P4 ZNF148-203ENST00000468369 1025 ntTSL 1 (best) BASIC32.81■■■□□ 2.84
VPS8Q8N3P4 RPL29-209ENST00000495383 713 ntAPPRIS P1 TSL 2 BASIC32.81■■■□□ 2.84
VPS8Q8N3P4 NCAPD3-204ENST00000526422 1060 ntAPPRIS ALT2 TSL 2 BASIC32.81■■■□□ 2.84
VPS8Q8N3P4 AL138781.1-201ENST00000566567 1274 ntBASIC32.81■■■□□ 2.84
VPS8Q8N3P4 HIRA-202ENST00000340170 3395 ntTSL 1 (best) BASIC32.81■■■□□ 2.84
VPS8Q8N3P4 TMPRSS5-208ENST00000544476 1320 ntTSL 2 BASIC32.8■■■□□ 2.84
VPS8Q8N3P4 HAUS3-202ENST00000443786 2430 ntAPPRIS P1 TSL 1 (best) BASIC32.8■■■□□ 2.84
VPS8Q8N3P4 TBL1Y-202ENST00000355162 2376 ntAPPRIS P1 TSL 1 (best) BASIC32.8■■■□□ 2.84
VPS8Q8N3P4 ZNF644-203ENST00000361321 1253 ntTSL 2 BASIC32.8■■■□□ 2.84
VPS8Q8N3P4 ASIP-201ENST00000374954 586 ntAPPRIS P1 TSL 1 (best) BASIC32.8■■■□□ 2.84
VPS8Q8N3P4 SAPCD2P1-201ENST00000395413 1184 ntBASIC32.8■■■□□ 2.84
VPS8Q8N3P4 SCO2-203ENST00000535425 1002 ntAPPRIS P1 TSL 2 BASIC32.8■■■□□ 2.84
VPS8Q8N3P4 CIRBP-246ENST00000628979 1043 ntTSL 2 BASIC32.8■■■□□ 2.84
VPS8Q8N3P4 EXOC3-AS1-202ENST00000623673 1663 ntBASIC32.8■■■□□ 2.84
VPS8Q8N3P4 SSTR3-202ENST00000617123 1781 ntAPPRIS P1 TSL 1 (best) BASIC32.8■■■□□ 2.84
VPS8Q8N3P4 LINC00565-201ENST00000562710 2331 ntBASIC32.8■■■□□ 2.84
VPS8Q8N3P4 PAQR6-212ENST00000540423 1729 ntTSL 3 BASIC32.8■■■□□ 2.84
VPS8Q8N3P4 PANO1-201ENST00000620120 1680 ntAPPRIS P1 BASIC32.79■■■□□ 2.84
VPS8Q8N3P4 MPV17L-202ENST00000396385 1037 ntAPPRIS P1 TSL 1 (best) BASIC32.79■■■□□ 2.84
VPS8Q8N3P4 AL512625.2-201ENST00000417533 625 ntBASIC32.79■■■□□ 2.84
VPS8Q8N3P4 ANAPC11-212ENST00000577425 603 ntTSL 3 BASIC32.79■■■□□ 2.84
VPS8Q8N3P4 TMEM17-201ENST00000335390 1797 ntAPPRIS P1 TSL 1 (best) BASIC32.79■■■□□ 2.84
VPS8Q8N3P4 FNDC10-201ENST00000422725 2085 ntAPPRIS P1 BASIC32.79■■■□□ 2.84
VPS8Q8N3P4 FBXO25-202ENST00000350302 2229 ntAPPRIS ALT1 TSL 1 (best) BASIC32.79■■■□□ 2.84
VPS8Q8N3P4 ZNF707-222ENST00000532158 2218 ntAPPRIS P1 TSL 1 (best) BASIC32.79■■■□□ 2.84
VPS8Q8N3P4 HOXA11-AS-204ENST00000522674 1549 ntTSL 1 (best) BASIC32.79■■■□□ 2.84
VPS8Q8N3P4 GRTP1-202ENST00000375430 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC32.79■■■□□ 2.84
VPS8Q8N3P4 NTN4-207ENST00000553059 1818 ntTSL 1 (best) BASIC32.79■■■□□ 2.84
VPS8Q8N3P4 CASP6-205ENST00000505486 538 ntTSL 4 BASIC32.78■■■□□ 2.84
VPS8Q8N3P4 PHB2-213ENST00000546111 858 ntTSL 2 BASIC32.78■■■□□ 2.84
VPS8Q8N3P4 THOC3-201ENST00000265097 1589 ntAPPRIS P1 TSL 1 (best) BASIC32.78■■■□□ 2.84
VPS8Q8N3P4 SLC25A24P1-201ENST00000411846 1569 ntTSL 5 BASIC32.78■■■□□ 2.84
VPS8Q8N3P4 SKIDA1-201ENST00000444772 2667 ntAPPRIS ALT2 TSL 5 BASIC32.78■■■□□ 2.84
VPS8Q8N3P4 SPIRE2-202ENST00000393062 2172 ntAPPRIS ALT2 TSL 1 (best) BASIC32.78■■■□□ 2.84
VPS8Q8N3P4 SNX21-201ENST00000342644 1506 ntTSL 1 (best) BASIC32.78■■■□□ 2.84
VPS8Q8N3P4 SLC2A7-201ENST00000400906 1539 ntAPPRIS P1 TSL 1 (best) BASIC32.78■■■□□ 2.84
VPS8Q8N3P4 PALM-207ENST00000590161 2137 ntTSL 4 BASIC32.78■■■□□ 2.84
VPS8Q8N3P4 MRGPRF-203ENST00000441623 2282 ntAPPRIS P1 TSL 2 BASIC32.78■■■□□ 2.84
VPS8Q8N3P4 TERF2-201ENST00000254942 2983 ntAPPRIS P1 TSL 1 (best) BASIC32.78■■■□□ 2.84
VPS8Q8N3P4 FDXR-219ENST00000583917 1762 ntTSL 5 BASIC32.78■■■□□ 2.84
VPS8Q8N3P4 PAX1-202ENST00000444366 1850 ntAPPRIS ALT2 TSL 2 BASIC32.78■■■□□ 2.84
VPS8Q8N3P4 NRXN1-205ENST00000401710 2873 ntTSL 5 BASIC32.78■■■□□ 2.84
VPS8Q8N3P4 PACRGL-206ENST00000502374 1034 ntTSL 2 BASIC32.77■■■□□ 2.84
VPS8Q8N3P4 MAMSTR-202ENST00000356751 1825 ntTSL 2 BASIC32.77■■■□□ 2.84
VPS8Q8N3P4 RNH1-222ENST00000533410 1829 ntAPPRIS P1 TSL 5 BASIC32.77■■■□□ 2.84
VPS8Q8N3P4 TEAD2-208ENST00000598810 2191 ntTSL 1 (best) BASIC32.77■■■□□ 2.84
VPS8Q8N3P4 PAXIP1-AS1-201ENST00000608317 2256 ntBASIC32.77■■■□□ 2.84
VPS8Q8N3P4 UNC119-202ENST00000335765 1424 ntAPPRIS P1 TSL 1 (best) BASIC32.77■■■□□ 2.84
VPS8Q8N3P4 MAGI2-AS3-209ENST00000448195 774 ntTSL 3 BASIC32.77■■■□□ 2.84
VPS8Q8N3P4 ALKBH6-212ENST00000485128 959 ntTSL 5 BASIC32.77■■■□□ 2.84
VPS8Q8N3P4 PBX1-209ENST00000485769 834 ntTSL 2 BASIC32.77■■■□□ 2.84
VPS8Q8N3P4 LYRM1-205ENST00000562740 931 ntTSL 1 (best) BASIC32.77■■■□□ 2.84
VPS8Q8N3P4 POU2F2-215ENST00000560398 1788 ntTSL 5 BASIC32.76■■■□□ 2.84
VPS8Q8N3P4 DPYS-201ENST00000351513 2127 ntAPPRIS P1 TSL 1 (best) BASIC32.76■■■□□ 2.84
VPS8Q8N3P4 AUH-202ENST00000375731 1577 ntAPPRIS P1 TSL 1 (best) BASIC32.76■■■□□ 2.83
VPS8Q8N3P4 B3GALT6-201ENST00000379198 2777 ntAPPRIS P1 BASIC32.76■■■□□ 2.83
VPS8Q8N3P4 AC010980.2-201ENST00000587099 1412 ntBASIC32.76■■■□□ 2.83
VPS8Q8N3P4 PDS5A-202ENST00000503396 2685 ntTSL 1 (best) BASIC32.76■■■□□ 2.83
VPS8Q8N3P4 CCDC189-206ENST00000543610 1967 ntAPPRIS P1 TSL 1 (best) BASIC32.76■■■□□ 2.83
VPS8Q8N3P4 XXYLT1-202ENST00000356740 564 ntTSL 2 BASIC32.76■■■□□ 2.83
VPS8Q8N3P4 AC007322.3-201ENST00000426526 701 ntBASIC32.76■■■□□ 2.83
VPS8Q8N3P4 AC008443.6-201ENST00000512508 500 ntTSL 4 BASIC32.76■■■□□ 2.83
VPS8Q8N3P4 IL34-204ENST00000566361 1001 ntAPPRIS ALT2 TSL 1 (best) BASIC32.76■■■□□ 2.83
VPS8Q8N3P4 IGFBP3-211ENST00000615754 792 ntTSL 5 BASIC32.76■■■□□ 2.83
VPS8Q8N3P4 FGFRL1-203ENST00000504138 1663 ntAPPRIS P1 TSL 1 (best) BASIC32.75■■■□□ 2.83
VPS8Q8N3P4 OTOP1-201ENST00000296358 1864 ntAPPRIS P1 TSL 1 (best) BASIC32.75■■■□□ 2.83
VPS8Q8N3P4 ATG101-201ENST00000336854 1439 ntAPPRIS P1 TSL 1 (best) BASIC32.75■■■□□ 2.83
VPS8Q8N3P4 CHRNA7-203ENST00000454250 2093 ntAPPRIS ALT2 TSL 2 BASIC32.75■■■□□ 2.83
VPS8Q8N3P4 MKRN4P-201ENST00000444706 1521 ntBASIC32.75■■■□□ 2.83
VPS8Q8N3P4 PACSIN3-201ENST00000298838 1843 ntAPPRIS P1 TSL 1 (best) BASIC32.75■■■□□ 2.83
VPS8Q8N3P4 IVD-206ENST00000487418 1809 ntAPPRIS P1 TSL 1 (best) BASIC32.75■■■□□ 2.83
VPS8Q8N3P4 MDK-204ENST00000395569 686 ntTSL 1 (best) BASIC32.75■■■□□ 2.83
VPS8Q8N3P4 WIPF1-207ENST00000410117 777 ntTSL 3 BASIC32.75■■■□□ 2.83
VPS8Q8N3P4 AC093762.2-201ENST00000641700 291 ntAPPRIS P1 BASIC32.75■■■□□ 2.83
VPS8Q8N3P4 GNB2-206ENST00000424361 1478 ntTSL 5 BASIC32.75■■■□□ 2.83
VPS8Q8N3P4 AC073188.6-202ENST00000616616 2281 ntTSL 1 (best) BASIC32.74■■■□□ 2.83
VPS8Q8N3P4 NELFE-202ENST00000375429 1584 ntAPPRIS P2 TSL 1 (best) BASIC32.74■■■□□ 2.83
VPS8Q8N3P4 HAGH-201ENST00000397353 1257 ntAPPRIS ALT1 TSL 5 BASIC32.74■■■□□ 2.83
VPS8Q8N3P4 GUSB-201ENST00000304895 2300 ntAPPRIS P1 TSL 1 (best) BASIC32.74■■■□□ 2.83
VPS8Q8N3P4 JUNB-201ENST00000302754 1820 ntAPPRIS P1 BASIC32.74■■■□□ 2.83
VPS8Q8N3P4 AL024507.2-201ENST00000606070 2574 ntBASIC32.74■■■□□ 2.83
VPS8Q8N3P4 DACT1-201ENST00000335867 2571 ntAPPRIS P3 TSL 1 (best) BASIC32.73■■■□□ 2.83
VPS8Q8N3P4 SBK2-201ENST00000344158 1056 ntAPPRIS P1 TSL 2 BASIC32.73■■■□□ 2.83
VPS8Q8N3P4 SLC29A4P1-201ENST00000398760 971 ntBASIC32.73■■■□□ 2.83
VPS8Q8N3P4 C4orf48-202ENST00000409860 477 ntAPPRIS P3 TSL 1 (best) BASIC32.73■■■□□ 2.83
VPS8Q8N3P4 SBK2-202ENST00000413299 1085 ntAPPRIS P1 TSL 5 BASIC32.73■■■□□ 2.83
VPS8Q8N3P4 DOCK5-208ENST00000481100 2166 ntTSL 1 (best) BASIC32.73■■■□□ 2.83
Retrieved 100 of 98,524 protein–RNA pairs in 23.8 ms