Protein–RNA interactions for Protein: Q6IN85

PPP4R3A, Serine/threonine-protein phosphatase 4 regulatory subunit 3A, humanhuman

Predictions only

Length 833 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R3AQ6IN85 WT1-AS-205ENST00000494911 1320 ntTSL 4 BASIC23.72■■□□□ 1.39
PPP4R3AQ6IN85 LINC01184-201ENST00000499346 1380 ntTSL 1 (best) BASIC23.72■■□□□ 1.39
PPP4R3AQ6IN85 PHOSPHO1-206ENST00000514112 1587 ntTSL 1 (best) BASIC23.72■■□□□ 1.39
PPP4R3AQ6IN85 BCAT2-207ENST00000597011 1579 ntTSL 5 BASIC23.72■■□□□ 1.39
PPP4R3AQ6IN85 PUF60-203ENST00000453551 1842 ntTSL 1 (best) BASIC23.72■■□□□ 1.39
PPP4R3AQ6IN85 RASSF1-203ENST00000359365 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC23.72■■□□□ 1.39
PPP4R3AQ6IN85 SLCO3A1-202ENST00000424469 2705 ntTSL 1 (best) BASIC23.71■■□□□ 1.39
PPP4R3AQ6IN85 PTPN18-202ENST00000347849 2472 ntTSL 1 (best) BASIC23.71■■□□□ 1.39
PPP4R3AQ6IN85 BASP1-201ENST00000322611 1878 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
PPP4R3AQ6IN85 ING1-201ENST00000333219 5119 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
PPP4R3AQ6IN85 TMEM204-201ENST00000253934 1686 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
PPP4R3AQ6IN85 SPINT2-202ENST00000454580 1367 ntTSL 1 (best) BASIC23.71■■□□□ 1.39
PPP4R3AQ6IN85 C19orf24-201ENST00000409293 983 ntAPPRIS P1 TSL 2 BASIC23.71■■□□□ 1.39
PPP4R3AQ6IN85 COL19A1-203ENST00000478620 589 ntTSL 1 (best) BASIC23.71■■□□□ 1.39
PPP4R3AQ6IN85 C17orf49-202ENST00000546495 996 ntAPPRIS ALT1 TSL 2 BASIC23.71■■□□□ 1.39
PPP4R3AQ6IN85 AC092143.4-201ENST00000570217 559 ntTSL 4 BASIC23.71■■□□□ 1.39
PPP4R3AQ6IN85 SEPT4-215ENST00000580809 952 ntTSL 1 (best) BASIC23.71■■□□□ 1.39
PPP4R3AQ6IN85 AL032819.3-201ENST00000640283 925 ntAPPRIS P1 TSL 5 BASIC23.71■■□□□ 1.39
PPP4R3AQ6IN85 WRNIP1-204ENST00000380773 2670 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
PPP4R3AQ6IN85 TSPAN17-207ENST00000508164 2457 ntTSL 1 (best) BASIC23.71■■□□□ 1.39
PPP4R3AQ6IN85 ILDR2-204ENST00000525740 2242 ntTSL 5 BASIC23.71■■□□□ 1.39
PPP4R3AQ6IN85 PRPSAP2-201ENST00000268835 1910 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
PPP4R3AQ6IN85 CA7-201ENST00000338437 1555 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.38
PPP4R3AQ6IN85 SCARB2-219ENST00000639738 1517 ntTSL 5 BASIC23.7■■□□□ 1.38
PPP4R3AQ6IN85 SLC1A6-203ENST00000544886 2420 ntTSL 1 (best) BASIC23.7■■□□□ 1.38
PPP4R3AQ6IN85 HAUS4-203ENST00000347758 1428 ntTSL 2 BASIC23.7■■□□□ 1.38
PPP4R3AQ6IN85 TMEM175-212ENST00000508204 1399 ntTSL 3 BASIC23.7■■□□□ 1.38
PPP4R3AQ6IN85 MMP23B-201ENST00000356026 1326 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.38
PPP4R3AQ6IN85 DOCK5-208ENST00000481100 2166 ntTSL 1 (best) BASIC23.7■■□□□ 1.38
PPP4R3AQ6IN85 MFSD11-216ENST00000590393 1141 ntBASIC23.7■■□□□ 1.38
PPP4R3AQ6IN85 FEM1AP4-201ENST00000443167 1987 ntBASIC23.7■■□□□ 1.38
PPP4R3AQ6IN85 CRHR1-201ENST00000293493 2621 ntTSL 5 BASIC23.7■■□□□ 1.38
PPP4R3AQ6IN85 MTCL1-201ENST00000306329 5718 ntAPPRIS ALT2 TSL 5 BASIC23.7■■□□□ 1.38
PPP4R3AQ6IN85 DTWD2-203ENST00000510708 2307 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.38
PPP4R3AQ6IN85 SERPINB5-201ENST00000382771 2783 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
PPP4R3AQ6IN85 CPNE9-203ENST00000383832 2068 ntAPPRIS P1 TSL 5 BASIC23.69■■□□□ 1.38
PPP4R3AQ6IN85 MYCN-201ENST00000281043 2602 ntAPPRIS P1 TSL 5 BASIC23.69■■□□□ 1.38
PPP4R3AQ6IN85 RAP1B-204ENST00000393436 2049 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
PPP4R3AQ6IN85 AL024507.2-201ENST00000606070 2574 ntBASIC23.69■■□□□ 1.38
PPP4R3AQ6IN85 PPCS-203ENST00000372561 1431 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
PPP4R3AQ6IN85 RBKS-201ENST00000302188 1973 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
PPP4R3AQ6IN85 TMEM200B-202ENST00000521452 2501 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
PPP4R3AQ6IN85 TNFRSF18-203ENST00000379268 1179 ntAPPRIS ALT2 TSL 1 (best) BASIC23.69■■□□□ 1.38
PPP4R3AQ6IN85 RASGRP2-209ENST00000394429 453 ntTSL 3 BASIC23.69■■□□□ 1.38
PPP4R3AQ6IN85 AL845552.2-201ENST00000553301 553 ntTSL 4 BASIC23.69■■□□□ 1.38
PPP4R3AQ6IN85 AC243732.1-201ENST00000612648 864 ntBASIC23.69■■□□□ 1.38
PPP4R3AQ6IN85 DHPS-223ENST00000614126 1124 ntTSL 5 BASIC23.69■■□□□ 1.38
PPP4R3AQ6IN85 TRIM2-212ENST00000632856 656 ntTSL 3 BASIC23.69■■□□□ 1.38
PPP4R3AQ6IN85 RARRES2P11-201ENST00000635158 484 ntBASIC23.69■■□□□ 1.38
PPP4R3AQ6IN85 SH3BP2-204ENST00000452765 2265 ntAPPRIS P3 TSL 1 (best) BASIC23.69■■□□□ 1.38
PPP4R3AQ6IN85 TCP11-203ENST00000373974 1689 ntAPPRIS ALT2 TSL 2 BASIC23.69■■□□□ 1.38
PPP4R3AQ6IN85 MATK-203ENST00000395045 2073 ntAPPRIS P4 TSL 2 BASIC23.69■■□□□ 1.38
PPP4R3AQ6IN85 SH3GLB2-203ENST00000372564 2982 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
PPP4R3AQ6IN85 GRK4-201ENST00000345167 2013 ntTSL 1 (best) BASIC23.68■■□□□ 1.38
PPP4R3AQ6IN85 RUNDC3B-207ENST00000493037 2020 ntAPPRIS ALT2 TSL 1 (best) BASIC23.68■■□□□ 1.38
PPP4R3AQ6IN85 BRI3-207ENST00000539286 699 ntTSL 2 BASIC23.68■■□□□ 1.38
PPP4R3AQ6IN85 AL137784.2-201ENST00000607332 1000 ntBASIC23.68■■□□□ 1.38
PPP4R3AQ6IN85 AC092666.2-201ENST00000613287 246 ntBASIC23.68■■□□□ 1.38
PPP4R3AQ6IN85 AC243773.2-201ENST00000616341 490 ntTSL 2 BASIC23.68■■□□□ 1.38
PPP4R3AQ6IN85 ABHD1-207ENST00000621324 1078 ntTSL 5 BASIC23.68■■□□□ 1.38
PPP4R3AQ6IN85 PLAGL1-207ENST00000417959 1645 ntTSL 1 (best) BASIC23.68■■□□□ 1.38
PPP4R3AQ6IN85 PTPRJ-208ENST00000615445 4773 ntAPPRIS ALT2 TSL 5 BASIC23.68■■□□□ 1.38
PPP4R3AQ6IN85 AC009126.1-201ENST00000501338 2245 ntTSL 2 BASIC23.68■■□□□ 1.38
PPP4R3AQ6IN85 CLDN23-201ENST00000519106 2169 ntAPPRIS P1 BASIC23.68■■□□□ 1.38
PPP4R3AQ6IN85 RBM17P2-201ENST00000616397 1405 ntBASIC23.67■■□□□ 1.38
PPP4R3AQ6IN85 SRP68-201ENST00000307877 2649 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
PPP4R3AQ6IN85 DACT1-204ENST00000541264 2610 ntAPPRIS ALT2 TSL 2 BASIC23.67■■□□□ 1.38
PPP4R3AQ6IN85 FAM171A2-201ENST00000293443 3160 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
PPP4R3AQ6IN85 TRIM67-203ENST00000449018 2166 ntTSL 1 (best) BASIC23.67■■□□□ 1.38
PPP4R3AQ6IN85 DEDD2-201ENST00000336034 1882 ntAPPRIS ALT1 TSL 1 (best) BASIC23.67■■□□□ 1.38
PPP4R3AQ6IN85 RHOD-201ENST00000308831 1129 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
PPP4R3AQ6IN85 SOCS1-201ENST00000332029 1225 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
PPP4R3AQ6IN85 AC009086.2-201ENST00000449759 610 ntAPPRIS P1 TSL 3 BASIC23.67■■□□□ 1.38
PPP4R3AQ6IN85 PALM-207ENST00000590161 2137 ntTSL 4 BASIC23.67■■□□□ 1.38
PPP4R3AQ6IN85 TMEM230-210ENST00000612323 1231 ntTSL 1 (best) BASIC23.67■■□□□ 1.38
PPP4R3AQ6IN85 AC011767.1-201ENST00000617410 1153 ntBASIC23.67■■□□□ 1.38
PPP4R3AQ6IN85 BID-214ENST00000617586 542 ntTSL 5 BASIC23.67■■□□□ 1.38
PPP4R3AQ6IN85 AC010536.3-201ENST00000620306 533 ntBASIC23.67■■□□□ 1.38
PPP4R3AQ6IN85 LPCAT4-201ENST00000314891 2262 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
PPP4R3AQ6IN85 ZNF669-201ENST00000343381 1951 ntAPPRIS P3 TSL 1 (best) BASIC23.67■■□□□ 1.38
PPP4R3AQ6IN85 CERKL-203ENST00000374969 1330 ntTSL 1 (best) BASIC23.66■■□□□ 1.38
PPP4R3AQ6IN85 SLC25A22-216ENST00000531214 1790 ntAPPRIS P1 TSL 2 BASIC23.66■■□□□ 1.38
PPP4R3AQ6IN85 OLFM1-206ENST00000371799 961 ntTSL 1 (best) BASIC23.66■■□□□ 1.38
PPP4R3AQ6IN85 AC037459.4-201ENST00000517384 585 ntTSL 4 BASIC23.66■■□□□ 1.38
PPP4R3AQ6IN85 EDA-209ENST00000525810 843 ntTSL 1 (best) BASIC23.66■■□□□ 1.38
PPP4R3AQ6IN85 EDA-210ENST00000527388 927 ntTSL 1 (best) BASIC23.66■■□□□ 1.38
PPP4R3AQ6IN85 ASRGL1-210ENST00000534571 639 ntTSL 2 BASIC23.66■■□□□ 1.38
PPP4R3AQ6IN85 FGF8-207ENST00000618991 856 ntTSL 3 BASIC23.66■■□□□ 1.38
PPP4R3AQ6IN85 CD99-212ENST00000624481 1089 ntAPPRIS ALT2 TSL 2 BASIC23.66■■□□□ 1.38
PPP4R3AQ6IN85 TEAD2-208ENST00000598810 2191 ntTSL 1 (best) BASIC23.66■■□□□ 1.38
PPP4R3AQ6IN85 SPR-201ENST00000234454 1480 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
PPP4R3AQ6IN85 PANO1-201ENST00000620120 1680 ntAPPRIS P1 BASIC23.66■■□□□ 1.38
PPP4R3AQ6IN85 ALG1-202ENST00000544428 1419 ntTSL 2 BASIC23.66■■□□□ 1.38
PPP4R3AQ6IN85 ATP6AP1-201ENST00000369762 2099 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
PPP4R3AQ6IN85 TMEM259-202ENST00000356663 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC23.66■■□□□ 1.38
PPP4R3AQ6IN85 STEAP2-204ENST00000394626 2456 ntTSL 2 BASIC23.66■■□□□ 1.38
PPP4R3AQ6IN85 FNDC10-201ENST00000422725 2085 ntAPPRIS P1 BASIC23.65■■□□□ 1.38
PPP4R3AQ6IN85 FIP1L1-201ENST00000306932 1878 ntAPPRIS ALT2 TSL 1 (best) BASIC23.65■■□□□ 1.38
PPP4R3AQ6IN85 ALX3-201ENST00000369792 1859 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
PPP4R3AQ6IN85 ABHD12B-202ENST00000353130 1477 ntAPPRIS P3 TSL 1 (best) BASIC23.65■■□□□ 1.38
Retrieved 100 of 98,524 protein–RNA pairs in 21.4 ms